RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 IGLV4-60A0A075B6I1 120 aa6.78□□□□□ -1.32
HMGXB3-205ENST00000514469 TRAV26-2A0A0B4J265 109 aa6.78□□□□□ -1.32
HMGXB3-205ENST00000514469 CT83Q5H943 113 aa6.78□□□□□ -1.32
HMGXB3-205ENST00000514469 GATD1Q8NB37 220 aa6.78□□□□□ -1.32
HMGXB3-205ENST00000514469 CIRBP-AS1Q8TBR5 109 aa6.78□□□□□ -1.32
HMGXB3-205ENST00000514469 DMBT1Q9UGM3 2413 aaPredicted RBP6.78□□□□□ -1.32
HMGXB3-205ENST00000514469 GATCO43716 136 aaKnown RBP6.77□□□□□ -1.33
HMGXB3-205ENST00000514469 NDUFS6O75380 124 aaKnown RBP6.77□□□□□ -1.33
HMGXB3-205ENST00000514469 AMTP48728 403 aa6.77□□□□□ -1.33
HMGXB3-205ENST00000514469 COTL1Q14019 142 aa6.77□□□□□ -1.33
HMGXB3-205ENST00000514469 GFRA4Q9GZZ7 299 aa6.77□□□□□ -1.33
HMGXB3-205ENST00000514469 IGLV10-54A0A075B6I4 117 aa6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 TRAV8-4A0A0B4J246 113 aa6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 A8MWL6 223 aa6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 UBE2L6O14933 153 aa6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 FOXA3P55318 350 aaPredicted RBP6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 DGAT2L7PQ6IED9 249 aa6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 SMIM15Q7Z3B0 74 aa6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 DEFB104AQ8WTQ1 72 aa6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 RPL39LQ96EH5 51 aaKnown RBP6.76□□□□□ -1.33
HMGXB3-205ENST00000514469 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
HMGXB3-205ENST00000514469 CEBPGP53567 150 aa6.75□□□□□ -1.33
HMGXB3-205ENST00000514469 LINC01551Q86U37 167 aa6.75□□□□□ -1.33
HMGXB3-205ENST00000514469 C9orf163Q8N9P6 203 aa6.75□□□□□ -1.33
HMGXB3-205ENST00000514469 CLRN3Q8NCR9 226 aa6.75□□□□□ -1.33
HMGXB3-205ENST00000514469 FAM210AQ96ND0 272 aa6.75□□□□□ -1.33
HMGXB3-205ENST00000514469 SMIM7Q9BQ49 75 aa6.75□□□□□ -1.33
HMGXB3-205ENST00000514469 NCR2O95944 276 aa6.74□□□□□ -1.33
HMGXB3-205ENST00000514469 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
HMGXB3-205ENST00000514469 TEX261Q6UWH6 196 aa6.74□□□□□ -1.33
HMGXB3-205ENST00000514469 EIF5A2Q9GZV4 153 aaKnown RBP6.74□□□□□ -1.33
HMGXB3-205ENST00000514469 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
HMGXB3-205ENST00000514469 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
HMGXB3-205ENST00000514469 SDHAF1A6NFY7 115 aa6.73□□□□□ -1.33
HMGXB3-205ENST00000514469 APCSP02743 223 aa6.73□□□□□ -1.33
HMGXB3-205ENST00000514469 SRP19P09132 144 aaKnown RBP6.73□□□□□ -1.33
HMGXB3-205ENST00000514469 TSKUQ8WUA8 353 aa6.73□□□□□ -1.33
HMGXB3-205ENST00000514469 LRP1Q07954 4544 aaKnown RBP6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 A0A1B0GVG6 124 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 hDV102S1A0JD36 115 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 IGKV2-29A2NJV5 120 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 ZNF727A8MUV8 499 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 HIGD1CA8MV81 97 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 KRTAP29-1A8MX34 341 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 H7C423 109 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 SDIM1Q6ZPB5 146 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 BORCS7Q96B45 105 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 OSTCQ9NRP0 149 aa6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 FLG2Q5D862 2391 aaPredicted RBP6.72□□□□□ -1.33
HMGXB3-205ENST00000514469 PANO1I0J062 215 aa6.71□□□□□ -1.34
HMGXB3-205ENST00000514469 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
HMGXB3-205ENST00000514469 CIRBPQ14011 172 aaKnown RBP6.71□□□□□ -1.34
HMGXB3-205ENST00000514469 AMMECR1LQ6DCA0 310 aa6.71□□□□□ -1.34
HMGXB3-205ENST00000514469 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
HMGXB3-205ENST00000514469 TMEM191AQ9H0A3 160 aa6.71□□□□□ -1.34
HMGXB3-205ENST00000514469 GAGE12HA6NDE8 117 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 I3L3M4 83 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 TSHBP01222 138 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 SLPIP03973 132 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 FGF6P10767 208 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 ZNF25P17030 456 aaPredicted RBP6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 ISOC2Q96AB3 205 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 RNF185Q96GF1 192 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 V9GYV3 84 aa6.7□□□□□ -1.34
HMGXB3-205ENST00000514469 IGHV3-64A0A075B6Q5 118 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 IGKV3OR2-268A0A0C4DH90 116 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 J3QL48 77 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 ESDP10768 282 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 RAB4AP20338 218 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 RPS10P46783 165 aaKnown RBP6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 RPL37AP61513 92 aaKnown RBP6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 RNASEKQ6P5S7 137 aaKnown RBP6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 CHCHD10Q8WYQ3 142 aaPredicted RBP6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 MRAP2Q96G30 205 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 ST20Q9HBF5 79 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 AP5S1Q9NUS5 200 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 TMEM242Q9NWH2 141 aa6.69□□□□□ -1.34
HMGXB3-205ENST00000514469 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 TRBV27A0A0K0K1C4 114 aa6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 PMCHP20382 165 aa6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 RPL23P62829 140 aaKnown RBP6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 FAM74A3Q4VXF1 159 aa6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 AMN1Q8IY45 258 aa6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 NUP35Q8NFH5 326 aa6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 OR5A1Q8NGJ0 315 aa6.68□□□□□ -1.34
HMGXB3-205ENST00000514469 C9JQL5 133 aa6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 FOXI1Q12951 378 aa6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 RIGQ13278 110 aa6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 TMEM241Q24JQ0 296 aa6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 CFAP161Q6P656 301 aa6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 MRPL52Q86TS9 123 aaKnown RBP6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 SPACA4Q8TDM5 124 aa6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 TMEM101Q96IK0 257 aa6.67□□□□□ -1.34
HMGXB3-205ENST00000514469 NAT8BQ9UHF3 227 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms