RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 MAP1LC3BQ9GZQ8 125 aa11.53□□□□□ -0.56
HMGCS1-206ENST00000511774 SCO2A0A1W2PP80 73 aa11.52□□□□□ -0.57
HMGCS1-206ENST00000511774 PTTG1IPP53801 180 aa11.52□□□□□ -0.57
HMGCS1-206ENST00000511774 A0A0U1RQV1 116 aa11.51□□□□□ -0.57
HMGCS1-206ENST00000511774 PAGE4O60829 102 aa11.51□□□□□ -0.57
HMGCS1-206ENST00000511774 IGLC6P0CF74 106 aa11.51□□□□□ -0.57
HMGCS1-206ENST00000511774 STOML3Q8TAV4 291 aa11.51□□□□□ -0.57
HMGCS1-206ENST00000511774 TCEAL7Q9BRU2 100 aa11.51□□□□□ -0.57
HMGCS1-206ENST00000511774 NIT2Q9NQR4 276 aa11.51□□□□□ -0.57
HMGCS1-206ENST00000511774 TRAV26-2A0A0B4J265 109 aa11.5□□□□□ -0.57
HMGCS1-206ENST00000511774 CACNG7P62955 275 aa11.5□□□□□ -0.57
HMGCS1-206ENST00000511774 COTL1Q14019 142 aa11.5□□□□□ -0.57
HMGCS1-206ENST00000511774 PRR4Q16378 134 aa11.5□□□□□ -0.57
HMGCS1-206ENST00000511774 BAGE2Q86Y30 109 aa11.5□□□□□ -0.57
HMGCS1-206ENST00000511774 TPPP3Q9BW30 176 aa11.49□□□□□ -0.57
HMGCS1-206ENST00000511774 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 MT-ND6P03923 174 aa11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 XCL1P47992 114 aa11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 GAGE2BQ13066 116 aa11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 AKR1C8PQ5T2L2 129 aa11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 Q6ZNX1 250 aa11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 S100ZQ8WXG8 99 aa11.48□□□□□ -0.57
HMGCS1-206ENST00000511774 SYCNQ0VAF6 134 aa11.47□□□□□ -0.57
HMGCS1-206ENST00000511774 C1orf137Q5JT78 98 aa11.47□□□□□ -0.57
HMGCS1-206ENST00000511774 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-206ENST00000511774 IGHV1-58A0A0C4DH39 117 aa11.46□□□□□ -0.57
HMGCS1-206ENST00000511774 NTF3P20783 257 aa11.46□□□□□ -0.57
HMGCS1-206ENST00000511774 LINC00299Q6ZSB3 139 aa11.46□□□□□ -0.57
HMGCS1-206ENST00000511774 KRTAP11-1Q8IUC1 163 aa11.46□□□□□ -0.57
HMGCS1-206ENST00000511774 FER1L6-AS1Q8NA97 138 aa11.46□□□□□ -0.57
HMGCS1-206ENST00000511774 MED28Q9H204 178 aa11.46□□□□□ -0.57
HMGCS1-206ENST00000511774 ALG5Q9Y673 324 aa11.46□□□□□ -0.57
HMGCS1-206ENST00000511774 CCL25O15444 150 aa11.45□□□□□ -0.58
HMGCS1-206ENST00000511774 S100A9P06702 114 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-206ENST00000511774 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
HMGCS1-206ENST00000511774 BCL2P10415 239 aa11.45□□□□□ -0.58
HMGCS1-206ENST00000511774 DEFA1P59665 94 aa11.45□□□□□ -0.58
HMGCS1-206ENST00000511774 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
HMGCS1-206ENST00000511774 RNASEKQ6P5S7 137 aaKnown RBP11.45□□□□□ -0.58
HMGCS1-206ENST00000511774 BORCS7-ASMTA0A0B4J1R7 106 aa11.44□□□□□ -0.58
HMGCS1-206ENST00000511774 FGF6P10767 208 aa11.44□□□□□ -0.58
HMGCS1-206ENST00000511774 AMMECR1LQ6DCA0 310 aa11.44□□□□□ -0.58
HMGCS1-206ENST00000511774 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
HMGCS1-206ENST00000511774 LOC107984640A0A0U1RRK4 108 aa11.43□□□□□ -0.58
HMGCS1-206ENST00000511774 LINC00959A0A1B0GUT2 108 aa11.43□□□□□ -0.58
HMGCS1-206ENST00000511774 GATD1Q8NB37 220 aa11.43□□□□□ -0.58
HMGCS1-206ENST00000511774 OR5A1Q8NGJ0 315 aa11.43□□□□□ -0.58
HMGCS1-206ENST00000511774 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
HMGCS1-206ENST00000511774 DIRC1Q969H9 104 aa11.42□□□□□ -0.58
HMGCS1-206ENST00000511774 A0A1B0GV50 99 aa11.41□□□□□ -0.58
HMGCS1-206ENST00000511774 H0Y9J4 135 aa11.41□□□□□ -0.58
HMGCS1-206ENST00000511774 CAMPP49913 170 aa11.41□□□□□ -0.58
HMGCS1-206ENST00000511774 TMUB2Q71RG4 321 aa11.41□□□□□ -0.58
HMGCS1-206ENST00000511774 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
HMGCS1-206ENST00000511774 CYTL1Q9NRR1 136 aa11.41□□□□□ -0.58
HMGCS1-206ENST00000511774 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
HMGCS1-206ENST00000511774 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-206ENST00000511774 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-206ENST00000511774 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
HMGCS1-206ENST00000511774 NUP35Q8NFH5 326 aa11.4□□□□□ -0.58
HMGCS1-206ENST00000511774 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-206ENST00000511774 NDUFA13Q9P0J0 144 aa11.4□□□□□ -0.58
HMGCS1-206ENST00000511774 C19orf71A6NCJ1 209 aa11.39□□□□□ -0.59
HMGCS1-206ENST00000511774 ZNF561-AS1K7EIQ3 104 aa11.39□□□□□ -0.59
HMGCS1-206ENST00000511774 RPL35P42766 123 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-206ENST00000511774 IGLV1-50A0A075B6I6 118 aa11.38□□□□□ -0.59
HMGCS1-206ENST00000511774 FXYD6-FXYD2A0A087WZ82 144 aa11.38□□□□□ -0.59
HMGCS1-206ENST00000511774 MUC17Q685J3 4493 aa11.38□□□□□ -0.59
HMGCS1-206ENST00000511774 H7C423 109 aa11.37□□□□□ -0.59
HMGCS1-206ENST00000511774 TRGC1P0CF51 173 aa11.37□□□□□ -0.59
HMGCS1-206ENST00000511774 NCR2O95944 276 aa11.36□□□□□ -0.59
HMGCS1-206ENST00000511774 APCSP02743 223 aa11.36□□□□□ -0.59
HMGCS1-206ENST00000511774 G3V3Q6 166 aa11.35□□□□□ -0.59
HMGCS1-206ENST00000511774 APOMO95445 188 aa11.35□□□□□ -0.59
HMGCS1-206ENST00000511774 RPS20P60866 119 aaKnown RBP11.35□□□□□ -0.59
HMGCS1-206ENST00000511774 CD164L2Q6UWJ8 174 aa11.35□□□□□ -0.59
HMGCS1-206ENST00000511774 SFT2D1Q8WV19 159 aa11.35□□□□□ -0.59
HMGCS1-206ENST00000511774 MBD3L1Q8WWY6 194 aa11.35□□□□□ -0.59
HMGCS1-206ENST00000511774 F2Z2F3 143 aa11.34□□□□□ -0.59
HMGCS1-206ENST00000511774 PFDN1O60925 122 aa11.34□□□□□ -0.59
HMGCS1-206ENST00000511774 ZNF25P17030 456 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-206ENST00000511774 FOXA3P55318 350 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-206ENST00000511774 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
HMGCS1-206ENST00000511774 CENPWQ5EE01 88 aa11.34□□□□□ -0.59
HMGCS1-206ENST00000511774 OPRPNQ99935 248 aaPredicted RBP11.34□□□□□ -0.59
HMGCS1-206ENST00000511774 FAM168BA1KXE4 195 aa11.33□□□□□ -0.6
HMGCS1-206ENST00000511774 GIPP09681 153 aaPredicted RBP11.33□□□□□ -0.6
HMGCS1-206ENST00000511774 A0A087WZ39 114 aa11.32□□□□□ -0.6
HMGCS1-206ENST00000511774 SDHAF1A6NFY7 115 aa11.32□□□□□ -0.6
HMGCS1-206ENST00000511774 ESDP10768 282 aa11.32□□□□□ -0.6
HMGCS1-206ENST00000511774 CTRLP40313 264 aa11.32□□□□□ -0.6
HMGCS1-206ENST00000511774 FAM213BQ8TBF2 198 aa11.32□□□□□ -0.6
HMGCS1-206ENST00000511774 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
HMGCS1-206ENST00000511774 RAB19A4D1S5 217 aa11.31□□□□□ -0.6
HMGCS1-206ENST00000511774 IFNA1P01562 189 aa11.31□□□□□ -0.6
HMGCS1-206ENST00000511774 SS18Q15532 418 aa11.31□□□□□ -0.6
HMGCS1-206ENST00000511774 C9orf62Q8N4C0 152 aa11.31□□□□□ -0.6
HMGCS1-206ENST00000511774 KCNRGQ8N5I3 272 aa11.31□□□□□ -0.6
HMGCS1-206ENST00000511774 C11orf52Q96A22 123 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms