RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FLGP20930 4061 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-208ENST00000511439 IGHV3-64A0A075B6Q5 118 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 IGKV1OR2-108A0A075B7D4 117 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 A6NED7 52 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 RIIAD1A6NNX1 92 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 GGTLC3B5MD39 225 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 E7EUB6 86 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 H3BQ85 93 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 SLC17A3O00476 420 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 COX7A2LO14548 114 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 GEMIN2O14893 280 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 PFN1P07737 140 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 RBX1P62877 108 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 SPINK13Q1W4C9 94 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 MRPL51Q4U2R6 128 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 C10orf91Q5T1B1 145 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 AMTNQ6UX39 209 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 GOLT1AQ6ZVE7 132 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 ZFAND2AQ8N6M9 145 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 MRPL30Q8TCC3 161 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 RAB2BQ8WUD1 216 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 TMEM203Q969S6 136 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 GPR146Q96CH1 333 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 LINC00052Q96N35 136 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 SEC22CQ9BRL7 303 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 MND1Q9BWT6 205 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 C20orf27Q9GZN8 174 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 CCDC90BQ9GZT6 254 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 TMEM222Q9H0R3 208 aa1.72□□□□□ -2.13
TOPBP1-208ENST00000511439 A0A1B0GVG6 124 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 GRIFINA4D1Z8 144 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 M0R2Z0 102 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 LST1O00453 97 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 SLC25A20O43772 301 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 GNG7O60262 68 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 IGHV3-53P01767 116 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 SRP19P09132 144 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 CRYBB3P26998 211 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 DEFB1P60022 68 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 RAB4BP61018 213 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 HMGN3Q15651 99 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 SAMD13Q5VXD3 122 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 Q6ZTI0 123 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 LINC00304Q8N9R0 145 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 OR13C8Q8NGS7 320 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 UBE2WQ96B02 151 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 ADAT3Q96EY9 351 aaPredicted RBP1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 C2orf50Q96LR7 162 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 MIXL1Q9H2W2 232 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 C8orf4Q9NR00 106 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 LYRM2Q9NU23 88 aaPredicted RBP1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 SNX12Q9UMY4 172 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 BAIAP2Q9UQB8 552 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 HHLA3Q9XRX5 114 aa1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 UTP11Q9Y3A2 253 aaKnown RBP1.71□□□□□ -2.14
TOPBP1-208ENST00000511439 TRBV20OR9-2A0A075B6H5 130 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 TRAV12-2A0A075B6T6 113 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 A0A0B4J2C4 111 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 A0A0J9YX75 114 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 IGLC7A0M8Q6 106 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 TMEM235A6NFC5 223 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 A8MTW9 85 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 A8MUN3 132 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 G3V2T6 193 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 TSTD3H0UI37 97 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 K7EIM0 57 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 PFDN1O60925 122 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 RPS11P62280 158 aaKnown RBP eCLIP1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 SNRPGP62308 76 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 SELENOWP63302 87 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 DSTQ03001 7570 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 SPINK9Q5DT21 86 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 TNFAIP8L3Q5GJ75 292 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 ZNF322Q6U7Q0 402 aaPredicted RBP1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 SMIM20Q8N5G0 67 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 C1orf64Q8NEQ6 169 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 OR10AC1Q8NH08 325 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 GPER1Q99527 375 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 MGLLQ99685 303 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 TTTY10Q9BZA0 68 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 YIPF3Q9GZM5 350 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 WDR61Q9GZS3 305 aaKnown RBP1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 SH3BGRL3Q9H299 93 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 C11orf1Q9H5F2 150 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 XAGE1AQ9HD64 81 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 UQCC1Q9NVA1 299 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 FUT9Q9Y231 359 aa1.7□□□□□ -2.14
TOPBP1-208ENST00000511439 TRGV1A0A0A0MS02 117 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 H7BYZ3 331 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 GPR31O00270 319 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 UBE2L6O14933 153 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 HMGB3O15347 200 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 NDUFC2O95298 119 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 IFNA7P01567 189 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 LGALS3P17931 250 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 TSPEAR-AS2P59090 65 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 TAS2R20P59543 309 aa1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 RPS20P60866 119 aaKnown RBP1.69□□□□□ -2.14
TOPBP1-208ENST00000511439 AKR1C8PQ5T2L2 129 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms