RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 MANBALQ9NQG1 85 aa14.37□□□□□ -0.11
SMAD5-207ENST00000511116 HMSDA8MTL9 139 aa14.36□□□□□ -0.11
SMAD5-207ENST00000511116 TRGC1P0CF51 173 aa14.36□□□□□ -0.11
SMAD5-207ENST00000511116 C7orf33Q8WU49 177 aa14.36□□□□□ -0.11
SMAD5-207ENST00000511116 DPH3P1Q9H4G8 78 aa14.36□□□□□ -0.11
SMAD5-207ENST00000511116 TRAV1-1A0A0B4J248 108 aa14.35□□□□□ -0.11
SMAD5-207ENST00000511116 RPS10P46783 165 aaKnown RBP14.35□□□□□ -0.11
SMAD5-207ENST00000511116 CCL20P78556 96 aa14.35□□□□□ -0.11
SMAD5-207ENST00000511116 COX6A2Q02221 97 aa14.35□□□□□ -0.11
SMAD5-207ENST00000511116 CFAP161Q6P656 301 aa14.35□□□□□ -0.11
SMAD5-207ENST00000511116 GAGE12HA6NDE8 117 aa14.34□□□□□ -0.11
SMAD5-207ENST00000511116 UBE2L6O14933 153 aa14.34□□□□□ -0.11
SMAD5-207ENST00000511116 BCL2L11O43521 198 aa14.34□□□□□ -0.11
SMAD5-207ENST00000511116 NDUFS6O75380 124 aaKnown RBP14.34□□□□□ -0.11
SMAD5-207ENST00000511116 AMTP48728 403 aa14.34□□□□□ -0.11
SMAD5-207ENST00000511116 SULT1A2P50226 295 aa14.34□□□□□ -0.11
SMAD5-207ENST00000511116 COTL1Q14019 142 aa14.34□□□□□ -0.11
SMAD5-207ENST00000511116 XKRY2A2RUG3 117 aa14.33□□□□□ -0.12
SMAD5-207ENST00000511116 NTF3P20783 257 aa14.33□□□□□ -0.12
SMAD5-207ENST00000511116 PRR3P79522 188 aaKnown RBP14.33□□□□□ -0.12
SMAD5-207ENST00000511116 LYZL1Q6UWQ5 148 aa14.33□□□□□ -0.12
SMAD5-207ENST00000511116 C9orf62Q8N4C0 152 aa14.33□□□□□ -0.12
SMAD5-207ENST00000511116 PRSS3P2Q8NHM4 247 aa14.33□□□□□ -0.12
SMAD5-207ENST00000511116 CNFNQ9BYD5 112 aa14.33□□□□□ -0.12
SMAD5-207ENST00000511116 CTRLP40313 264 aa14.32□□□□□ -0.12
SMAD5-207ENST00000511116 GNG13Q9P2W3 67 aa14.32□□□□□ -0.12
SMAD5-207ENST00000511116 TRBV20OR9-2A0A075B6H5 130 aa14.31□□□□□ -0.12
SMAD5-207ENST00000511116 GVQW2A0A096LPI5 108 aaPredicted RBP14.31□□□□□ -0.12
SMAD5-207ENST00000511116 KANTRA0A1W2PQU2 76 aa14.3□□□□□ -0.12
SMAD5-207ENST00000511116 RAB19A4D1S5 217 aa14.3□□□□□ -0.12
SMAD5-207ENST00000511116 IFNA1P01562 189 aa14.3□□□□□ -0.12
SMAD5-207ENST00000511116 GNG4P50150 75 aa14.29□□□□□ -0.12
SMAD5-207ENST00000511116 EIF5AP63241 154 aaKnown RBP14.29□□□□□ -0.12
SMAD5-207ENST00000511116 MAJINQ3KP22 176 aa14.29□□□□□ -0.12
SMAD5-207ENST00000511116 GATD1Q8NB37 220 aa14.29□□□□□ -0.12
SMAD5-207ENST00000511116 RGS21Q2M5E4 152 aa14.28□□□□□ -0.12
SMAD5-207ENST00000511116 HIGD2BQ4VC39 106 aa14.28□□□□□ -0.12
SMAD5-207ENST00000511116 CHCHD10Q8WYQ3 142 aaPredicted RBP14.28□□□□□ -0.12
SMAD5-207ENST00000511116 STPG4Q8N801 248 aa14.27□□□□□ -0.13
SMAD5-207ENST00000511116 IGKV2-24A0A0C4DH68 120 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 A0A0J9YXV3 536 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 H7C423 109 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 NCR2O95944 276 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 KRTAP10-8P60410 259 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 MEF2BQ02080 365 aaPredicted RBP14.26□□□□□ -0.13
SMAD5-207ENST00000511116 Q6ZNX1 250 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 GTSF1Q8WW33 167 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 BIN3Q9NQY0 253 aa14.26□□□□□ -0.13
SMAD5-207ENST00000511116 A0A096LNI7 61 aa14.25□□□□□ -0.13
SMAD5-207ENST00000511116 PDE6DO43924 150 aa14.25□□□□□ -0.13
SMAD5-207ENST00000511116 FOXI1Q12951 378 aa14.25□□□□□ -0.13
SMAD5-207ENST00000511116 IGKV3OR2-268A0A0C4DH90 116 aa14.24□□□□□ -0.13
SMAD5-207ENST00000511116 NUDT10Q8NFP7 164 aa14.24□□□□□ -0.13
SMAD5-207ENST00000511116 NUDT11Q96G61 164 aa14.24□□□□□ -0.13
SMAD5-207ENST00000511116 TRAV26-2A0A0B4J265 109 aa14.23□□□□□ -0.13
SMAD5-207ENST00000511116 ODF1Q14990 250 aa14.23□□□□□ -0.13
SMAD5-207ENST00000511116 TWIST1Q15672 202 aa14.22□□□□□ -0.13
SMAD5-207ENST00000511116 AMMECR1LQ6DCA0 310 aa14.22□□□□□ -0.13
SMAD5-207ENST00000511116 SPINK6Q6UWN8 80 aa14.22□□□□□ -0.13
SMAD5-207ENST00000511116 LINC00474Q9P2X8 69 aa14.22□□□□□ -0.13
SMAD5-207ENST00000511116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.21□□□□□ -0.13
SMAD5-207ENST00000511116 IGKV2-29A2NJV5 120 aaPredicted RBP14.21□□□□□ -0.13
SMAD5-207ENST00000511116 FGF6P10767 208 aa14.21□□□□□ -0.13
SMAD5-207ENST00000511116 SRSF9Q13242 221 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMAD5-207ENST00000511116 RPL39LQ96EH5 51 aaKnown RBP14.21□□□□□ -0.13
SMAD5-207ENST00000511116 MED9Q9NWA0 146 aa14.21□□□□□ -0.13
SMAD5-207ENST00000511116 TEX46H3BTG2 121 aa14.2□□□□□ -0.14
SMAD5-207ENST00000511116 ZNF25P17030 456 aaPredicted RBP14.2□□□□□ -0.14
SMAD5-207ENST00000511116 OR5A1Q8NGJ0 315 aa14.2□□□□□ -0.14
SMAD5-207ENST00000511116 LYPD6BQ8NI32 183 aa14.2□□□□□ -0.14
SMAD5-207ENST00000511116 APCSP02743 223 aa14.19□□□□□ -0.14
SMAD5-207ENST00000511116 RNASEKQ6P5S7 137 aaKnown RBP14.19□□□□□ -0.14
SMAD5-207ENST00000511116 RPP21Q9H633 154 aaKnown RBP14.19□□□□□ -0.14
SMAD5-207ENST00000511116 PKIGQ9Y2B9 76 aa14.19□□□□□ -0.14
SMAD5-207ENST00000511116 FAM231BA6NCW3 169 aa14.18□□□□□ -0.14
SMAD5-207ENST00000511116 SDHAF1A6NFY7 115 aa14.18□□□□□ -0.14
SMAD5-207ENST00000511116 BCL2P10415 239 aa14.18□□□□□ -0.14
SMAD5-207ENST00000511116 TEX261Q6UWH6 196 aa14.18□□□□□ -0.14
SMAD5-207ENST00000511116 REG3GQ6UW15 175 aa14.17□□□□□ -0.14
SMAD5-207ENST00000511116 IGHV1-58A0A0C4DH39 117 aa14.16□□□□□ -0.14
SMAD5-207ENST00000511116 TRBV6-5A0A0K0K1A5 114 aa14.16□□□□□ -0.14
SMAD5-207ENST00000511116 K7EN84 100 aa14.16□□□□□ -0.14
SMAD5-207ENST00000511116 EIF5AL1Q6IS14 154 aaKnown RBP14.16□□□□□ -0.14
SMAD5-207ENST00000511116 RNASE7Q9H1E1 156 aaKnown RBP14.16□□□□□ -0.14
SMAD5-207ENST00000511116 LINC00959A0A1B0GUT2 108 aa14.15□□□□□ -0.14
SMAD5-207ENST00000511116 ESDP10768 282 aa14.15□□□□□ -0.14
SMAD5-207ENST00000511116 FOXA3P55318 350 aaPredicted RBP14.15□□□□□ -0.14
SMAD5-207ENST00000511116 CARD19Q96LW7 228 aa14.15□□□□□ -0.14
SMAD5-207ENST00000511116 XCL1P47992 114 aa14.14□□□□□ -0.15
SMAD5-207ENST00000511116 Q6ZRP5 223 aa14.14□□□□□ -0.15
SMAD5-207ENST00000511116 FAM210AQ96ND0 272 aa14.14□□□□□ -0.15
SMAD5-207ENST00000511116 I3L3M4 83 aa14.13□□□□□ -0.15
SMAD5-207ENST00000511116 CCL25O15444 150 aa14.13□□□□□ -0.15
SMAD5-207ENST00000511116 OCC1Q8TAD7 63 aa14.13□□□□□ -0.15
SMAD5-207ENST00000511116 TAGLN2P37802 199 aaKnown RBP14.12□□□□□ -0.15
SMAD5-207ENST00000511116 SMIM15Q7Z3B0 74 aa14.12□□□□□ -0.15
SMAD5-207ENST00000511116 LINC00526Q96FQ7 95 aa14.12□□□□□ -0.15
SMAD5-207ENST00000511116 MRPL52Q86TS9 123 aaKnown RBP14.11□□□□□ -0.15
SMAD5-207ENST00000511116 BTF3L4Q96K17 158 aa14.11□□□□□ -0.15
SMAD5-207ENST00000511116 TSHBP01222 138 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms