RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 DAZ3Q9NR90 486 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-213ENST00000509357 IGLV5-52A0A0A0MRZ9 124 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 TRBV6-8A0A0A6YYG3 113 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 TRBV6-5A0A0K0K1A5 114 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 NPYP01303 97 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 POLR2KP53803 58 aaKnown RBP5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 LAGE3Q14657 143 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 TMEM136Q6ZRR5 245 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 RMI2Q96E14 147 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 CTDSP1Q9GZU7 261 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 ABCA13Q86UQ4 5058 aa5.84□□□□□ -1.47
PDLIM5-213ENST00000509357 TGIF2-C20orf24A0A0A6YYL0 155 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 TSHBP01222 138 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 GCSHP23434 173 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 ELOBQ15370 118 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 RHEBQ15382 184 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 MPV17L2Q567V2 206 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 ATP5L2Q7Z4Y8 100 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 NIT1Q86X76 327 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 IMMP2LQ96T52 175 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 TMEM70Q9BUB7 260 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 CHCHD7Q9BUK0 85 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 KRTAP17-1Q9BYP8 105 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 RPS10P5Q9NQ39 176 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 TMEM242Q9NWH2 141 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 KLK12Q9UKR0 248 aa5.83□□□□□ -1.48
PDLIM5-213ENST00000509357 IGKV2D-24A0A075B6R9 120 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 SDHAF1A6NFY7 115 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 D6R8Y8 96 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 H7C1H1 209 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 IQCJQ1A5X6 159 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 UBE2WQ96B02 151 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 BORCS7Q96B45 105 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 MRAP2Q96G30 205 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 CHCHD5Q9BSY4 110 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 COX11Q9Y6N1 276 aa5.82□□□□□ -1.48
PDLIM5-213ENST00000509357 IGLV4-60A0A075B6I1 120 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 LRCOL1A6NCL2 159 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 LECT2O14960 151 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 CRPP02741 224 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 KRTAP10-1P60331 282 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 KIAA1644Q3SXP7 199 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 TMEM97Q5BJF2 176 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 CBLN2Q8IUK8 224 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 Q8N814 137 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 Q8N976 141 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 NTN5Q8WTR8 489 aaPredicted RBP5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 FAM104AQ969W3 186 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 BTF3L4Q96K17 158 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 FAT1Q14517 4588 aa5.81□□□□□ -1.48
PDLIM5-213ENST00000509357 TRBV24-1A0A075B6N3 115 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 TRBV27A0A0K0K1C4 114 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 A0A1B0GW15 77 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 IGKV2-29A2NJV5 120 aaPredicted RBP5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 SCO1O75880 301 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 TNFRSF6BO95407 300 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 ANGP03950 147 aaKnown RBP5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 ESDP10768 282 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 PKIAP61925 76 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 Q0VG73 95 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 GAGE6Q13070 117 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 WFDC2Q14508 124 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 Q8N1X5 172 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 SVBPQ8N300 66 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 C20orf203Q8NBC4 194 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 BAALCQ8WXS3 180 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 FRZBQ92765 325 aa5.8□□□□□ -1.48
PDLIM5-213ENST00000509357 TRBV25-1A0A075B6N4 114 aa5.79□□□□□ -1.48
PDLIM5-213ENST00000509357 SNAPINO95295 136 aa5.79□□□□□ -1.48
PDLIM5-213ENST00000509357 SUMO2P61956 95 aaKnown RBP5.79□□□□□ -1.48
PDLIM5-213ENST00000509357 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
PDLIM5-213ENST00000509357 ENHOQ6UWT2 76 aa5.79□□□□□ -1.48
PDLIM5-213ENST00000509357 SMIM15Q7Z3B0 74 aa5.79□□□□□ -1.48
PDLIM5-213ENST00000509357 KRTAP4-5Q9BYR2 181 aa5.79□□□□□ -1.48
PDLIM5-213ENST00000509357 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 TRAV9-1A0A075B6T8 112 aa5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 IGHV1-24A0A0C4DH33 117 aa5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 EPM2AB3EWF7 344 aa5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 CKS2P33552 79 aa5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 RBX1P62877 108 aa5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 C1orf43Q9BWL3 253 aa5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 ST20Q9HBF5 79 aa5.78□□□□□ -1.48
PDLIM5-213ENST00000509357 PRSS47A8MTI9 375 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 I3L3M4 83 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 PHOX2AO14813 284 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 TCAPO15273 167 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 RPL32P62910 135 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 COTL1Q14019 142 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 CLPSL2Q6UWE3 100 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 ORMDL3Q8N138 153 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 URB1-AS1Q96HZ7 61 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 PRELID3AQ96N28 172 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 TMEM243Q9BU79 118 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 SMIM2Q9BVW6 85 aa5.77□□□□□ -1.49
PDLIM5-213ENST00000509357 UBE2L6O14933 153 aa5.76□□□□□ -1.49
PDLIM5-213ENST00000509357 AMTP48728 403 aa5.76□□□□□ -1.49
PDLIM5-213ENST00000509357 XGP55808 180 aa5.76□□□□□ -1.49
PDLIM5-213ENST00000509357 RPL39P62891 51 aaKnown RBP5.76□□□□□ -1.49
PDLIM5-213ENST00000509357 HAMPP81172 84 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms