RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OSTCQ9NRP0 149 aa4.81□□□□□ -1.64
TOPBP1-207ENST00000509162 FAT3Q8TDW7 4589 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 RPS10P46783 165 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 CACNG7P62955 275 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 ADIRFQ15847 76 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 NIT1Q86X76 327 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 MAPKAPK5-AS1Q8N8E1 139 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 GATD1Q8NB37 220 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 RPL39LQ96EH5 51 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 GFRA4Q9GZZ7 299 aa4.8□□□□□ -1.64
TOPBP1-207ENST00000509162 TRBV7-3A0A075B6L6 115 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 HIGD1CA8MV81 97 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 ERVFC1-1P60608 527 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 FOXI1Q12951 378 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 MPV17L2Q567V2 206 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 OR10J3Q5JRS4 329 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 NUP35Q8NFH5 326 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 TSKUQ8WUA8 353 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 DAZAP1Q96EP5 407 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 DPH3P1Q9H4G8 78 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 NAT8Q9UHE5 227 aa4.79□□□□□ -1.64
TOPBP1-207ENST00000509162 A0A087WTM6 91 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 A0A1B0GXF2 115 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 SMIM27A0A1W2PRY6 76 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 F2Z2F3 143 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 SMKR1H3BMG3 65 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 NCR2O95944 276 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 RPL36AP83881 106 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 TWIST1Q15672 202 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 WDR73Q6P4I2 378 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 SH2D6Q7Z4S9 175 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 RPL36ALQ969Q0 106 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 TM2D2Q9BX73 214 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 BIN3Q9NQY0 253 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 HERC1Q15751 4861 aa4.78□□□□□ -1.64
TOPBP1-207ENST00000509162 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 CAMPP49913 170 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 PEA15Q15121 130 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 TMEM241Q24JQ0 296 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 FAM74A3Q4VXF1 159 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 RASL11AQ6T310 242 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 SPATA12Q7Z6I5 190 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 AMN1Q8IY45 258 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 NRACQ8N912 160 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 Q8N976 141 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 Q9HAA7 133 aa4.77□□□□□ -1.65
TOPBP1-207ENST00000509162 XKRY2A2RUG3 117 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 A8MWL6 223 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 TRGC1P0CF51 173 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 IQCJQ1A5X6 159 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 SOHLH1Q5JUK2 328 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 ENHOQ6UWT2 76 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 C20orf203Q8NBC4 194 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 SMDT1Q9H4I9 107 aa4.76□□□□□ -1.65
TOPBP1-207ENST00000509162 IGLV4-60A0A075B6I1 120 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 TRAV8-6A0A0B4J262 113 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 A0A1B0GUT8 65 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 FAM231BA6NCW3 169 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 TSHBP01222 138 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 RAB4AP20338 218 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 KRTAP10-1P60331 282 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 RBX1P62877 108 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 GAGE6Q13070 117 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 LAGE3Q14657 143 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 MRPL54Q6P161 138 aaKnown RBP4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 ATRAIDQ6UW56 229 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 CLPSL2Q6UWE3 100 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 COMMD7Q86VX2 200 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 NTN5Q8WTR8 489 aaPredicted RBP4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 CHCHD7Q9BUK0 85 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 TMEM191AQ9H0A3 160 aa4.75□□□□□ -1.65
TOPBP1-207ENST00000509162 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 TRBV6-5A0A0K0K1A5 114 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 LECT2O14960 151 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 SMIM17P0DL12 118 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 MRPL51Q4U2R6 128 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 C10orf126Q8N4M7 172 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 NIT2Q9NQR4 276 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 PRR34Q9NV39 138 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 TMEM242Q9NWH2 141 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 KLK12Q9UKR0 248 aa4.74□□□□□ -1.65
TOPBP1-207ENST00000509162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 A0A087WWC5 75 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 IGKV2-29A2NJV5 120 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 TMEM218A2RU14 115 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 LINC00862A6NCI5 91 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 SDHAF1A6NFY7 115 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 C16orf90A8MZG2 172 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 POLR2KP53803 58 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 HAMPP81172 84 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 FAM104BQ5XKR9 115 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 C15orf54Q8N8G6 183 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 FAM104AQ969W3 186 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 UBE2WQ96B02 151 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 TMEM70Q9BUB7 260 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 NAT8BQ9UHF3 227 aa4.73□□□□□ -1.65
TOPBP1-207ENST00000509162 IGHV1-24A0A0C4DH33 117 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 141.6 ms