RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 FAM210AQ96ND0 272 aa8.81□□□□□ -1
CCHCR1-227ENST00000508852 NCR2O95944 276 aa8.8□□□□□ -1
CCHCR1-227ENST00000508852 AMTP48728 403 aa8.8□□□□□ -1
CCHCR1-227ENST00000508852 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
CCHCR1-227ENST00000508852 CFAP161Q6P656 301 aa8.8□□□□□ -1
CCHCR1-227ENST00000508852 CLPSL2Q6UWE3 100 aa8.8□□□□□ -1
CCHCR1-227ENST00000508852 RPP21Q9H633 154 aaKnown RBP8.8□□□□□ -1
CCHCR1-227ENST00000508852 TRBV20OR9-2A0A075B6H5 130 aa8.79□□□□□ -1
CCHCR1-227ENST00000508852 H7C423 109 aa8.79□□□□□ -1
CCHCR1-227ENST00000508852 BLOC1S1P78537 153 aa8.79□□□□□ -1
CCHCR1-227ENST00000508852 SERTAD4-AS1Q5TG53 156 aa8.79□□□□□ -1
CCHCR1-227ENST00000508852 KRTAP26-1Q6PEX3 210 aa8.79□□□□□ -1
CCHCR1-227ENST00000508852 C20orf203Q8NBC4 194 aa8.79□□□□□ -1
CCHCR1-227ENST00000508852 hDV102S1A0JD36 115 aa8.78□□□□□ -1
CCHCR1-227ENST00000508852 TMEM250H0YL14 139 aa8.78□□□□□ -1
CCHCR1-227ENST00000508852 RPL37AP61513 92 aaKnown RBP8.78□□□□□ -1
CCHCR1-227ENST00000508852 RNF185Q96GF1 192 aa8.78□□□□□ -1
CCHCR1-227ENST00000508852 IGLV10-54A0A075B6I4 117 aa8.77□□□□□ -1.01
CCHCR1-227ENST00000508852 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
CCHCR1-227ENST00000508852 A8MWL6 223 aa8.77□□□□□ -1.01
CCHCR1-227ENST00000508852 NDUFS6O75380 124 aaKnown RBP8.76□□□□□ -1.01
CCHCR1-227ENST00000508852 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
CCHCR1-227ENST00000508852 AMMECR1LQ6DCA0 310 aa8.76□□□□□ -1.01
CCHCR1-227ENST00000508852 SDIM1Q6ZPB5 146 aa8.76□□□□□ -1.01
CCHCR1-227ENST00000508852 OCC1Q8TAD7 63 aa8.76□□□□□ -1.01
CCHCR1-227ENST00000508852 BORCS7Q96B45 105 aa8.76□□□□□ -1.01
CCHCR1-227ENST00000508852 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
CCHCR1-227ENST00000508852 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
CCHCR1-227ENST00000508852 GATCO43716 136 aaKnown RBP8.75□□□□□ -1.01
CCHCR1-227ENST00000508852 CT83Q5H943 113 aa8.75□□□□□ -1.01
CCHCR1-227ENST00000508852 FAM231DQ6ZW35 169 aa8.75□□□□□ -1.01
CCHCR1-227ENST00000508852 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
CCHCR1-227ENST00000508852 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
CCHCR1-227ENST00000508852 APCSP02743 223 aa8.74□□□□□ -1.01
CCHCR1-227ENST00000508852 ZNF25P17030 456 aaPredicted RBP8.74□□□□□ -1.01
CCHCR1-227ENST00000508852 CIRBPQ14011 172 aaKnown RBP8.74□□□□□ -1.01
CCHCR1-227ENST00000508852 DPH3Q96FX2 82 aa8.74□□□□□ -1.01
CCHCR1-227ENST00000508852 K7EN84 100 aa8.73□□□□□ -1.01
CCHCR1-227ENST00000508852 FOXA3P55318 350 aaPredicted RBP8.73□□□□□ -1.01
CCHCR1-227ENST00000508852 AKAP14Q86UN6 197 aa8.73□□□□□ -1.01
CCHCR1-227ENST00000508852 I3L3M4 83 aa8.72□□□□□ -1.01
CCHCR1-227ENST00000508852 LYPD6BQ8NI32 183 aa8.72□□□□□ -1.01
CCHCR1-227ENST00000508852 TMEM101Q96IK0 257 aa8.72□□□□□ -1.01
CCHCR1-227ENST00000508852 BTF3L4Q96K17 158 aa8.72□□□□□ -1.01
CCHCR1-227ENST00000508852 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 PMCHP20382 165 aa8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 RNASEKQ6P5S7 137 aaKnown RBP8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 GTSF1Q8WW33 167 aa8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 GFRA4Q9GZZ7 299 aa8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.71□□□□□ -1.02
CCHCR1-227ENST00000508852 TRAV26-2A0A0B4J265 109 aa8.7□□□□□ -1.02
CCHCR1-227ENST00000508852 GAGE12HA6NDE8 117 aa8.7□□□□□ -1.02
CCHCR1-227ENST00000508852 PPP1R17O96001 155 aa8.7□□□□□ -1.02
CCHCR1-227ENST00000508852 RPS10P46783 165 aaKnown RBP8.7□□□□□ -1.02
CCHCR1-227ENST00000508852 SMAGPQ0VAQ4 97 aa8.7□□□□□ -1.02
CCHCR1-227ENST00000508852 Q6ZNX1 250 aa8.7□□□□□ -1.02
CCHCR1-227ENST00000508852 Q6ZRU5 148 aa8.7□□□□□ -1.02
CCHCR1-227ENST00000508852 FGF6P10767 208 aa8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 OR5A1Q8NGJ0 315 aa8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 C7orf33Q8WU49 177 aa8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 CHCHD10Q8WYQ3 142 aaPredicted RBP8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 RPL39LQ96EH5 51 aaKnown RBP8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 EIF5A2Q9GZV4 153 aaKnown RBP8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 LINC00474Q9P2X8 69 aa8.69□□□□□ -1.02
CCHCR1-227ENST00000508852 PKHD1L1Q86WI1 4243 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 IGKV3OR2-268A0A0C4DH90 116 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 ALKAL2Q6UX46 152 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 SPACA4Q8TDM5 124 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 TSKUQ8WUA8 353 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 MRAP2Q96G30 205 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 SMIM7Q9BQ49 75 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 TMEM191AQ9H0A3 160 aa8.68□□□□□ -1.02
CCHCR1-227ENST00000508852 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.67□□□□□ -1.02
CCHCR1-227ENST00000508852 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
CCHCR1-227ENST00000508852 IGKV2-29A2NJV5 120 aaPredicted RBP8.67□□□□□ -1.02
CCHCR1-227ENST00000508852 CEBPGP53567 150 aa8.67□□□□□ -1.02
CCHCR1-227ENST00000508852 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
CCHCR1-227ENST00000508852 OSTCQ9NRP0 149 aa8.67□□□□□ -1.02
CCHCR1-227ENST00000508852 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
CCHCR1-227ENST00000508852 A0A087WYN8 130 aa8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 ZNF727A8MUV8 499 aa8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 CCL25O15444 150 aa8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 SLPIP03973 132 aa8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 SS18Q15532 418 aa8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 FAT3Q8TDW7 4589 aa8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 LRP1Q07954 4544 aaKnown RBP8.66□□□□□ -1.02
CCHCR1-227ENST00000508852 IGHV1-58A0A0C4DH39 117 aa8.65□□□□□ -1.02
CCHCR1-227ENST00000508852 PANO1I0J062 215 aa8.65□□□□□ -1.02
CCHCR1-227ENST00000508852 ESDP10768 282 aa8.65□□□□□ -1.02
CCHCR1-227ENST00000508852 RIGQ13278 110 aa8.65□□□□□ -1.02
CCHCR1-227ENST00000508852 FAM74A3Q4VXF1 159 aa8.65□□□□□ -1.02
CCHCR1-227ENST00000508852 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
CCHCR1-227ENST00000508852 LINC01551Q86U37 167 aa8.65□□□□□ -1.02
CCHCR1-227ENST00000508852 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
CCHCR1-227ENST00000508852 VCYO14598 125 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms