RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249		C9JQL5	133 aa		6.16	□□□□□ -1.42
UBE2D3-223	ENST00000508249	PPP1R17	O96001	155 aa		6.16	□□□□□ -1.42
UBE2D3-223	ENST00000508249	S100A8	P05109	93 aa		6.16	□□□□□ -1.42
UBE2D3-223	ENST00000508249	KRTAP10-4	P60372	401 aa	Predicted RBP	6.16	□□□□□ -1.42
UBE2D3-223	ENST00000508249	UQCC3	Q6UW78	93 aa		6.16	□□□□□ -1.42
UBE2D3-223	ENST00000508249	IGHV1-24	A0A0C4DH33	117 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	PSCA	O43653	123 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	IGHV3-30	P01768	117 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	IGHV3-33	P01772	117 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	IGHV3-30-3	P0DP02	117 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	IGHV3-30-5	P0DP03	117 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	SRSF3	P84103	164 aa	Known RBP	6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249		Q0VG73	95 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	IQCJ	Q1A5X6	159 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	FAM30A	Q9NZY2	134 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249		Q9UF83	564 aa		6.15	□□□□□ -1.42
UBE2D3-223	ENST00000508249	TRBV6-5	A0A0K0K1A5	114 aa		6.14	□□□□□ -1.43
UBE2D3-223	ENST00000508249	SMIM27	A0A1W2PRY6	76 aa		6.14	□□□□□ -1.43
UBE2D3-223	ENST00000508249	NCR2	O95944	276 aa		6.14	□□□□□ -1.43
UBE2D3-223	ENST00000508249	COTL1	Q14019	142 aa		6.14	□□□□□ -1.43
UBE2D3-223	ENST00000508249	NUP35	Q8NFH5	326 aa		6.14	□□□□□ -1.43
UBE2D3-223	ENST00000508249	MRAP2	Q96G30	205 aa		6.14	□□□□□ -1.43
UBE2D3-223	ENST00000508249	CHCHD5	Q9BSY4	110 aa		6.14	□□□□□ -1.43
UBE2D3-223	ENST00000508249	TMEM262	E9PQX1	116 aa		6.13	□□□□□ -1.43
UBE2D3-223	ENST00000508249	CRP	P02741	224 aa		6.13	□□□□□ -1.43
UBE2D3-223	ENST00000508249	MT-ND4L	P03901	98 aa		6.13	□□□□□ -1.43
UBE2D3-223	ENST00000508249	ATP5L2	Q7Z4Y8	100 aa		6.13	□□□□□ -1.43
UBE2D3-223	ENST00000508249	GATD1	Q8NB37	220 aa		6.13	□□□□□ -1.43
UBE2D3-223	ENST00000508249	ANAPC16	Q96DE5	110 aa		6.13	□□□□□ -1.43
UBE2D3-223	ENST00000508249	TMEM70	Q9BUB7	260 aa		6.13	□□□□□ -1.43
UBE2D3-223	ENST00000508249	LINC00862	A6NCI5	91 aa		6.12	□□□□□ -1.43
UBE2D3-223	ENST00000508249		F8W036	122 aa		6.12	□□□□□ -1.43
UBE2D3-223	ENST00000508249		H7C423	109 aa		6.12	□□□□□ -1.43
UBE2D3-223	ENST00000508249	GCSH	P23434	173 aa		6.12	□□□□□ -1.43
UBE2D3-223	ENST00000508249	NTN5	Q8WTR8	489 aa	Predicted RBP	6.12	□□□□□ -1.43
UBE2D3-223	ENST00000508249	TMEM243	Q9BU79	118 aa		6.12	□□□□□ -1.43
UBE2D3-223	ENST00000508249		A0A1B0GUV1	79 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	UBE2L6	O14933	153 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	APCS	P02743	223 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	AMT	P48728	403 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	HBB	P68871	147 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	IFITM2	Q01629	132 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	MIA	Q16674	131 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	ATRAID	Q6UW56	229 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	NTM-AS1	Q6ZSK4	140 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249		Q9HAA7	133 aa		6.11	□□□□□ -1.43
UBE2D3-223	ENST00000508249	SDHAF1	A6NFY7	115 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249		I3L3M4	83 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	TCAP	O15273	167 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	RAB4A	P20338	218 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	SMAGP	Q0VAQ4	97 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	MPV17L2	Q567V2	206 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	FAM104B	Q5XKR9	115 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249		Q6ZSA8	131 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	DEFB104A	Q8WTQ1	72 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	UBE2W	Q96B02	151 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	C1orf43	Q9BWL3	253 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	ST20	Q9HBF5	79 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	KLK12	Q9UKR0	248 aa		6.1	□□□□□ -1.43
UBE2D3-223	ENST00000508249	IGKV2D-24	A0A075B6R9	120 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	TRAV26-2	A0A0B4J265	109 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	TMEM218	A2RU14	115 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	PHOX2A	O14813	284 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	PPBP	P02775	128 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	ANG	P03950	147 aa	Known RBP	6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	PMCH	P20382	165 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	RBX1	P62877	108 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	C14orf177	Q52M58	125 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	AMN1	Q8IY45	258 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	LINC00528	Q8N1L1	170 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	RPL39L	Q96EH5	51 aa	Known RBP	6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	RNF185	Q96GF1	192 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	IMMP2L	Q96T52	175 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	SEC11C	Q9BY50	192 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	CTDSP1	Q9GZU7	261 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	PRR34	Q9NV39	138 aa		6.09	□□□□□ -1.43
UBE2D3-223	ENST00000508249	TRAV8-4	A0A0B4J246	113 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	TRBV27	A0A0K0K1C4	114 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249		A0A1B0GXF2	115 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	LRCOL1	A6NCL2	159 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	VCY	O14598	125 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	ZNF25	P17030	456 aa	Predicted RBP	6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	CAMP	P49913	170 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	POLR2K	P53803	58 aa	Known RBP	6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	RPL32	P62910	135 aa	Known RBP	6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	GAGE6	Q13070	117 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249		Q8N3U1	123 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	C20orf78	Q9BR46	151 aa		6.08	□□□□□ -1.44
UBE2D3-223	ENST00000508249	TRBV24-1	A0A075B6N3	115 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	TRAV9-1	A0A075B6T8	112 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	OXT	P01178	125 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	SUMO2	P61956	95 aa	Known RBP	6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	AMMECR1L	Q6DCA0	310 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	COMMD7	Q86VX2	200 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249		Q8N814	137 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249		Q8N976	141 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	BTF3L4	Q96K17	158 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	KIR2DL4	Q99706	377 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	LAMTOR2	Q9Y2Q5	125 aa		6.07	□□□□□ -1.44
UBE2D3-223	ENST00000508249	PLA2G1B	P04054	148 aa	Known RBP	6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 3001.3 ms