RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 UBE2L6O14933 153 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 NDUFS6O75380 124 aaKnown RBP3.59□□□□□ -1.83
GYPB-208ENST00000507009 P01737 135 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 NKX2-5P52952 324 aaPredicted RBP3.59□□□□□ -1.83
GYPB-208ENST00000507009 DEFA1P59665 94 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 ZNF726P1Q15940 193 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 IQCJQ1A5X6 159 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 ZNF674Q2M3X9 581 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 CFAP161Q6P656 301 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 SPINK6Q6UWN8 80 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 C15orf56Q8N910 161 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 HIST1H2BAQ96A08 127 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 AQP10Q96PS8 301 aa3.59□□□□□ -1.83
GYPB-208ENST00000507009 PSMG3Q9BT73 122 aaPredicted RBP3.59□□□□□ -1.83
GYPB-208ENST00000507009 LPAP08519 4548 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 CTXND1A0A1B0GTU2 59 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 A0A1B0GV50 99 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 H7C1H1 209 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 UPK1BO75841 260 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 AMTP48728 403 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 SERF2P84101 59 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 AKR1C8PQ5T2L2 129 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 RPL7L1Q6DKI1 246 aaKnown RBP3.58□□□□□ -1.84
GYPB-208ENST00000507009 SUMO4Q6EEV6 95 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 INO80EQ8NBZ0 244 aaPredicted RBP3.58□□□□□ -1.84
GYPB-208ENST00000507009 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 AP1S3Q96PC3 154 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 VAX2Q9UIW0 290 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 TNFSF18Q9UNG2 199 aa3.58□□□□□ -1.84
GYPB-208ENST00000507009 BORCS7-ASMTA0A0B4J1R7 106 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 MAP1LC3B2A6NCE7 125 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 B5MCH6 92 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 LTAP01374 205 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 GZMBP10144 247 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 IFITM3Q01628 133 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 AMMECR1LQ6DCA0 310 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 Q6ZRP5 223 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 S100ZQ8WXG8 99 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 NKX6-2Q9C056 277 aaPredicted RBP3.57□□□□□ -1.84
GYPB-208ENST00000507009 MAP1LC3BQ9GZQ8 125 aa3.57□□□□□ -1.84
GYPB-208ENST00000507009 FXYD6-FXYD2A0A087WZ82 144 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 FAM231BA6NCW3 169 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 SNAI2O43623 268 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 PAGE4O60829 102 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 COTL1Q14019 142 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 RNASEKQ6P5S7 137 aaKnown RBP3.56□□□□□ -1.84
GYPB-208ENST00000507009 RASL11AQ6T310 242 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 COX8CQ7Z4L0 72 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 BAGE2Q86Y30 109 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 CHCHD10Q8WYQ3 142 aaPredicted RBP3.56□□□□□ -1.84
GYPB-208ENST00000507009 MARVELD1Q9BSK0 173 aa3.56□□□□□ -1.84
GYPB-208ENST00000507009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.55□□□□□ -1.84
GYPB-208ENST00000507009 TRAV26-2A0A0B4J265 109 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 A0A1B0GUV1 79 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 IGKV2-29A2NJV5 120 aaPredicted RBP3.55□□□□□ -1.84
GYPB-208ENST00000507009 M0QY20 66 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 MT-ND6P03923 174 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 OR5AL1P0C617 328 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 XCL1P47992 114 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 CACNG7P62955 275 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 GAGE2BQ13066 116 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 SRSF9Q13242 221 aaKnown RBP eCLIP3.55□□□□□ -1.84
GYPB-208ENST00000507009 PRR4Q16378 134 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 RNF151Q2KHN1 245 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 Q5BKY6 102 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 FER1L6-AS1Q8NA97 138 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 CARD19Q96LW7 228 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 ALG5Q9Y673 324 aa3.55□□□□□ -1.84
GYPB-208ENST00000507009 GVQW2A0A096LPI5 108 aaPredicted RBP3.54□□□□□ -1.84
GYPB-208ENST00000507009 PFDN1O60925 122 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 CXCL1P09341 107 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 FHITP49789 147 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 OR2D3Q8NGH3 330 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 FAM213BQ8TBF2 198 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 MED28Q9H204 178 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 NDUFA13Q9P0J0 144 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 LINC00474Q9P2X8 69 aa3.54□□□□□ -1.84
GYPB-208ENST00000507009 CCL25O15444 150 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 S100A9P06702 114 aaKnown RBP3.53□□□□□ -1.84
GYPB-208ENST00000507009 BCL2P10415 239 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 SYCNQ0VAF6 134 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 FOXI1Q12951 378 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 C1orf137Q5JT78 98 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 SFT2D1Q8WV19 159 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 NIT2Q9NQR4 276 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 PSORS1C2Q9UIG4 136 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 PKIGQ9Y2B9 76 aa3.53□□□□□ -1.84
GYPB-208ENST00000507009 IGHV1-58A0A0C4DH39 117 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 A0A0U1RQV1 116 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 LOC107984640A0A0U1RRK4 108 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 A0A1W2PNN7 141 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 APCSP02743 223 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 TRGC1P0CF51 173 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 FGF6P10767 208 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 PTTG1IPP53801 180 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 RPL18AQ02543 176 aaKnown RBP3.52□□□□□ -1.85
GYPB-208ENST00000507009 LYZL1Q6UWQ5 148 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 Q6ZNX1 250 aa3.52□□□□□ -1.85
GYPB-208ENST00000507009 TMUB2Q71RG4 321 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms