RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 NRGNQ92686 78 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 NDUFA12Q9UI09 145 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 FBN2P35556 2912 aa11.79□□□□□ -0.52
SCLT1-208ENST00000506368 ABCA4P78363 2273 aa11.78□□□□□ -0.52
SCLT1-208ENST00000506368 ROS1P08922 2347 aa11.78□□□□□ -0.52
SCLT1-208ENST00000506368 HECTD1Q9ULT8 2610 aa11.78□□□□□ -0.52
SCLT1-208ENST00000506368 A0A087WWL8 130 aa11.78□□□□□ -0.52
SCLT1-208ENST00000506368 C5orf56Q8N8D9 126 aa11.78□□□□□ -0.52
SCLT1-208ENST00000506368 USMG5Q96IX5 58 aa11.78□□□□□ -0.52
SCLT1-208ENST00000506368 DUX3Q96PT4 197 aa11.77□□□□□ -0.52
SCLT1-208ENST00000506368 FAM236AA0A1B0GUQ0 79 aa11.77□□□□□ -0.53
SCLT1-208ENST00000506368 FAM236BA0A1B0GV22 79 aa11.77□□□□□ -0.53
SCLT1-208ENST00000506368 A0A1B0GX51 115 aa11.77□□□□□ -0.53
SCLT1-208ENST00000506368 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.53
SCLT1-208ENST00000506368 TINCRA0A1B0GVN0 87 aa11.76□□□□□ -0.53
SCLT1-208ENST00000506368 SDIM1Q6ZPB5 146 aa11.76□□□□□ -0.53
SCLT1-208ENST00000506368 LRRC75A-AS1Q8N1F1 130 aa11.76□□□□□ -0.53
SCLT1-208ENST00000506368 JPT2Q9H910 190 aa11.76□□□□□ -0.53
SCLT1-208ENST00000506368 MUC4Q99102 2169 aa11.76□□□□□ -0.53
SCLT1-208ENST00000506368 IGHV3-64A0A075B6Q5 118 aa11.75□□□□□ -0.53
SCLT1-208ENST00000506368 IGHV3-16A0A0C4DH30 117 aa11.75□□□□□ -0.53
SCLT1-208ENST00000506368 NDUFA7O95182 113 aa11.75□□□□□ -0.53
SCLT1-208ENST00000506368 C9orf153Q5TBE3 101 aa11.75□□□□□ -0.53
SCLT1-208ENST00000506368 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
SCLT1-208ENST00000506368 OPRPNQ99935 248 aaPredicted RBP11.75□□□□□ -0.53
SCLT1-208ENST00000506368 SPXQ9BT56 116 aa11.75□□□□□ -0.53
SCLT1-208ENST00000506368 MOB4Q9Y3A3 225 aa11.75□□□□□ -0.53
SCLT1-208ENST00000506368 CD28P10747 220 aa11.74□□□□□ -0.53
SCLT1-208ENST00000506368 FAM74A4Q5TZK3 123 aa11.74□□□□□ -0.53
SCLT1-208ENST00000506368 DCANP1Q8TF63 244 aa11.74□□□□□ -0.53
SCLT1-208ENST00000506368 BAHCC1Q9P281 2608 aa11.74□□□□□ -0.53
SCLT1-208ENST00000506368 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
SCLT1-208ENST00000506368 RPL11P62913 178 aaKnown RBP11.74□□□□□ -0.53
SCLT1-208ENST00000506368 CIRBPQ14011 172 aaKnown RBP11.74□□□□□ -0.53
SCLT1-208ENST00000506368 UNQ9165/PRO28630Q6UXU0 137 aa11.74□□□□□ -0.53
SCLT1-208ENST00000506368 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
SCLT1-208ENST00000506368 F6UB75 175 aa11.73□□□□□ -0.53
SCLT1-208ENST00000506368 PPDPFQ9H3Y8 114 aa11.73□□□□□ -0.53
SCLT1-208ENST00000506368 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
SCLT1-208ENST00000506368 AKAP6Q13023 2319 aa11.73□□□□□ -0.53
SCLT1-208ENST00000506368 COX7A2LO14548 114 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 TRACP01848 142 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 ADAMTSL4-AS1Q5T5F5 129 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 CSMD1Q96PZ7 3565 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 A0A1W2PPR1 153 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 K7EMT4 169 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 SAA4P35542 130 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 RPS28P62857 69 aaKnown RBP11.72□□□□□ -0.53
SCLT1-208ENST00000506368 C11orf71Q6IPW1 123 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 DAND5Q8N907 189 aa11.72□□□□□ -0.53
SCLT1-208ENST00000506368 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
SCLT1-208ENST00000506368 J3KT08 172 aa11.71□□□□□ -0.53
SCLT1-208ENST00000506368 FAM222AQ5U5X8 452 aa11.71□□□□□ -0.53
SCLT1-208ENST00000506368 RHPN1-AS1Q9BWJ2 59 aa11.71□□□□□ -0.53
SCLT1-208ENST00000506368 INAFM2P0DMQ5 153 aa11.71□□□□□ -0.54
SCLT1-208ENST00000506368 DAZ1Q9NQZ3 744 aaKnown RBP11.71□□□□□ -0.54
SCLT1-208ENST00000506368 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
SCLT1-208ENST00000506368 NDUFA1O15239 70 aa11.7□□□□□ -0.54
SCLT1-208ENST00000506368 C5orf47Q569G3 176 aa11.7□□□□□ -0.54
SCLT1-208ENST00000506368 C5orf38Q86SI9 138 aa11.7□□□□□ -0.54
SCLT1-208ENST00000506368 ZFP36P26651 326 aaKnown RBP11.69□□□□□ -0.54
SCLT1-208ENST00000506368 ZNF580Q9UK33 172 aa11.69□□□□□ -0.54
SCLT1-208ENST00000506368 ABCA12Q86UK0 2595 aa11.69□□□□□ -0.54
SCLT1-208ENST00000506368 IGHV1OR15-1A0A075B7D0 117 aa11.69□□□□□ -0.54
SCLT1-208ENST00000506368 NPFFO15130 113 aa11.69□□□□□ -0.54
SCLT1-208ENST00000506368 COX7CP15954 63 aa11.69□□□□□ -0.54
SCLT1-208ENST00000506368 DEFB1P60022 68 aa11.69□□□□□ -0.54
SCLT1-208ENST00000506368 RNF152Q8N8N0 203 aa11.69□□□□□ -0.54
SCLT1-208ENST00000506368 APCP25054 2843 aa11.68□□□□□ -0.54
SCLT1-208ENST00000506368 LY6HO94772 140 aa11.68□□□□□ -0.54
SCLT1-208ENST00000506368 CRYGAP11844 174 aa11.68□□□□□ -0.54
SCLT1-208ENST00000506368 VPS13CQ709C8 3753 aa11.68□□□□□ -0.54
SCLT1-208ENST00000506368 ATOX1O00244 68 aa11.67□□□□□ -0.54
SCLT1-208ENST00000506368 ASH1LQ9NR48 2969 aaKnown RBP11.67□□□□□ -0.54
SCLT1-208ENST00000506368 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
SCLT1-208ENST00000506368 LINC00694P0DN24 101 aa11.67□□□□□ -0.54
SCLT1-208ENST00000506368 TIRAPP58753 221 aa11.67□□□□□ -0.54
SCLT1-208ENST00000506368 HERVK_113P63121 156 aa11.67□□□□□ -0.54
SCLT1-208ENST00000506368 DEFB104AQ8WTQ1 72 aa11.67□□□□□ -0.54
SCLT1-208ENST00000506368 CSDC2Q9Y534 153 aaKnown RBP11.67□□□□□ -0.54
SCLT1-208ENST00000506368 POLQO75417 2590 aa11.67□□□□□ -0.54
SCLT1-208ENST00000506368 ITPR2Q14571 2701 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 PIK3CD-AS1Q5SR53 167 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 SPG11Q96JI7 2443 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 IGLV5-45A0A087WSX0 123 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 PF4V1P10720 104 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 KRTAP10-9P60411 292 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 TMEM219Q86XT9 240 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 FAM104AQ969W3 186 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 LINC00527Q9UJ94 153 aa11.66□□□□□ -0.54
SCLT1-208ENST00000506368 UNC79Q9P2D8 2635 aa11.65□□□□□ -0.54
SCLT1-208ENST00000506368 FLNBO75369 2602 aaKnown RBP11.65□□□□□ -0.54
SCLT1-208ENST00000506368 TRBV12-3P01733 135 aa11.64□□□□□ -0.55
SCLT1-208ENST00000506368 HIST1H4AP62805 103 aaKnown RBP11.64□□□□□ -0.55
SCLT1-208ENST00000506368 CITED2Q99967 270 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-208ENST00000506368 OVOL2Q9BRP0 275 aa11.64□□□□□ -0.55
SCLT1-208ENST00000506368 LINC00308Q8TCZ7 52 aa11.63□□□□□ -0.55
SCLT1-208ENST00000506368 UBE2D4Q9Y2X8 147 aa11.63□□□□□ -0.55
SCLT1-208ENST00000506368 SNRPD3P62318 126 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms