RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 UBE2D3P61077 147 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 UBE2D2P62837 147 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 GAGE1Q13065 139 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 GAGE4Q13068 117 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 GAGE5Q13069 117 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 GAGE13Q4V321 117 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 LINC00173Q6ZV60 143 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
POLR2J3-211ENST00000506060 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 HSBP1L1C9JCN9 74 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 PRB2P02812 416 aaPredicted RBP8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 NPSP0C0P6 89 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 CRYBA4P53673 196 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 LGALS9CQ6DKI2 356 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 SH2D6Q7Z4S9 175 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 SBSPONQ8IVN8 264 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 PHLDA1Q8WV24 401 aaPredicted RBP8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 TIMM17AQ99595 171 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 TM2D3Q9BRN9 247 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 GTSF1LQ9H1H1 148 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 RETNQ9HD89 108 aa8.5□□□□□ -1.05
POLR2J3-211ENST00000506060 GYPEP15421 78 aa8.49□□□□□ -1.05
POLR2J3-211ENST00000506060 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
POLR2J3-211ENST00000506060 VAMP8Q9BV40 100 aa8.49□□□□□ -1.05
POLR2J3-211ENST00000506060 CELA1Q9UNI1 258 aa8.49□□□□□ -1.05
POLR2J3-211ENST00000506060 NBEAL1Q6ZS30 2694 aa8.48□□□□□ -1.05
POLR2J3-211ENST00000506060 TRAV12-1A0A0B4J245 112 aa8.48□□□□□ -1.05
POLR2J3-211ENST00000506060 F5H768 121 aa8.48□□□□□ -1.05
POLR2J3-211ENST00000506060 MRAPQ8TCY5 172 aa8.48□□□□□ -1.05
POLR2J3-211ENST00000506060 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
POLR2J3-211ENST00000506060 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
POLR2J3-211ENST00000506060 IGHV3-38A0A0C4DH36 116 aa8.47□□□□□ -1.05
POLR2J3-211ENST00000506060 H7C423 109 aa8.47□□□□□ -1.05
POLR2J3-211ENST00000506060 UBE2L6O14933 153 aa8.47□□□□□ -1.05
POLR2J3-211ENST00000506060 Q8N976 141 aa8.47□□□□□ -1.05
POLR2J3-211ENST00000506060 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
POLR2J3-211ENST00000506060 TIMM21Q9BVV7 248 aa8.47□□□□□ -1.05
POLR2J3-211ENST00000506060 Q9UF83 564 aa8.47□□□□□ -1.05
POLR2J3-211ENST00000506060 ANK2Q01484 3957 aa8.46□□□□□ -1.05
POLR2J3-211ENST00000506060 TRBV25-1A0A075B6N4 114 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 A0A087WX48 190 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 A0A0J9YWU9 116 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 IGIPA6NJ69 53 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 TSTD3H0UI37 97 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 HTN3P15516 51 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 PLNP26678 52 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 RPL39P62891 51 aaKnown RBP8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 MRPL23Q16540 153 aaKnown RBP8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 DGAT2L7PQ6IED9 249 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 C11orf45Q8TAV5 145 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 CHCHD7Q9BUK0 85 aa8.46□□□□□ -1.06
POLR2J3-211ENST00000506060 TRAV9-2A0A087WT02 112 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 TRAV26-1A0A087WT03 109 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 DPM2O94777 84 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 LINC00694P0DN24 101 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 PMVKQ15126 192 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 C12orf74Q32Q52 190 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 DEFB104AQ8WTQ1 72 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
POLR2J3-211ENST00000506060 H3BNG1 76 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 PKIAP61925 76 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 ODF1Q14990 250 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 BAALCQ8WXS3 180 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 TMEM101Q96IK0 257 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 B9D2Q9BPU9 175 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 VCX2Q9H322 139 aa8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
POLR2J3-211ENST00000506060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 A0A0J9YY99 117 aa8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 F8VRH5 84 aa8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 IGKCP01834 107 aa8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 C2orf88Q9BSF0 95 aa8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
POLR2J3-211ENST00000506060 PRSS29PA6NIE9 313 aa8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 NHLRC4P0CG21 123 aaPredicted RBP8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 ZNF25P17030 456 aaPredicted RBP8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 SPATA45Q537H7 98 aa8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 MRPL52Q86TS9 123 aaKnown RBP8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 ATOH7Q8N100 152 aa8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 VSIG2Q96IQ7 327 aa8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 PAM16Q9Y3D7 125 aa8.42□□□□□ -1.06
POLR2J3-211ENST00000506060 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
POLR2J3-211ENST00000506060 NTM-AS1Q6ZSK4 140 aa8.41□□□□□ -1.06
POLR2J3-211ENST00000506060 OR5A1Q8NGJ0 315 aa8.41□□□□□ -1.06
POLR2J3-211ENST00000506060 PMCHL2Q9BQD1 86 aa8.41□□□□□ -1.06
POLR2J3-211ENST00000506060 CHCHD5Q9BSY4 110 aa8.41□□□□□ -1.06
POLR2J3-211ENST00000506060 MRPL35Q9NZE8 188 aaKnown RBP8.41□□□□□ -1.06
POLR2J3-211ENST00000506060 DEFB131BA0A096LNP1 70 aa8.4□□□□□ -1.06
POLR2J3-211ENST00000506060 TRAV10A0A0B4J240 114 aa8.4□□□□□ -1.06
POLR2J3-211ENST00000506060 FGF6P10767 208 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms