RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 CEMP1Q6PRD7 247 aaPredicted RBP14.15□□□□□ -0.14
SDHA-206ENST00000505555 NACAE9PAV3 2078 aa14.15□□□□□ -0.14
SDHA-206ENST00000505555 IGLV4-3A0A075B6K6 122 aa14.15□□□□□ -0.14
SDHA-206ENST00000505555 EDA2RQ9HAV5 297 aa14.15□□□□□ -0.14
SDHA-206ENST00000505555 TRAV25A0A0B4J276 109 aa14.14□□□□□ -0.15
SDHA-206ENST00000505555 TSSC4Q9Y5U2 329 aaPredicted RBP14.14□□□□□ -0.15
SDHA-206ENST00000505555 C1orf158Q8N1D5 194 aa14.14□□□□□ -0.15
SDHA-206ENST00000505555 SETXQ7Z333 2677 aaKnown RBP14.13□□□□□ -0.15
SDHA-206ENST00000505555 ZNF479Q96JC4 524 aa14.13□□□□□ -0.15
SDHA-206ENST00000505555 LINC00467Q9BRT7 94 aa14.13□□□□□ -0.15
SDHA-206ENST00000505555 VCX2Q9H322 139 aa14.13□□□□□ -0.15
SDHA-206ENST00000505555 UNC79Q9P2D8 2635 aa14.13□□□□□ -0.15
SDHA-206ENST00000505555 A0A0J9YXV3 536 aa14.13□□□□□ -0.15
SDHA-206ENST00000505555 RNASE1P07998 156 aaKnown RBP14.13□□□□□ -0.15
SDHA-206ENST00000505555 FAM104AQ969W3 186 aa14.13□□□□□ -0.15
SDHA-206ENST00000505555 IGHV3-38A0A0C4DH36 116 aa14.12□□□□□ -0.15
SDHA-206ENST00000505555 PIK3CD-AS1Q5SR53 167 aa14.12□□□□□ -0.15
SDHA-206ENST00000505555 NFE4Q86UQ8 179 aa14.12□□□□□ -0.15
SDHA-206ENST00000505555 IGHV3-64A0A075B6Q5 118 aa14.11□□□□□ -0.15
SDHA-206ENST00000505555 SRSF9Q13242 221 aaKnown RBP eCLIP14.11□□□□□ -0.15
SDHA-206ENST00000505555 RNASE13Q5GAN3 156 aaKnown RBP14.11□□□□□ -0.15
SDHA-206ENST00000505555 PTH2Q96A98 100 aa14.11□□□□□ -0.15
SDHA-206ENST00000505555 SPXQ9BT56 116 aa14.11□□□□□ -0.15
SDHA-206ENST00000505555 RRN3P1Q2M238 152 aa14.11□□□□□ -0.15
SDHA-206ENST00000505555 BEAN1Q3B7T3 259 aa14.11□□□□□ -0.15
SDHA-206ENST00000505555 CLUHP3Q96NS8 147 aa14.1□□□□□ -0.15
SDHA-206ENST00000505555 SMR3AQ99954 134 aa14.1□□□□□ -0.15
SDHA-206ENST00000505555 A0A0J9YY99 117 aa14.1□□□□□ -0.15
SDHA-206ENST00000505555 C16orf95Q9H693 158 aa14.1□□□□□ -0.15
SDHA-206ENST00000505555 J3QQQ9 107 aa14.09□□□□□ -0.15
SDHA-206ENST00000505555 IGHV3-53P01767 116 aa14.09□□□□□ -0.15
SDHA-206ENST00000505555 WFDC10AQ9H1F0 79 aa14.09□□□□□ -0.15
SDHA-206ENST00000505555 TMEM223A0PJW6 202 aa14.09□□□□□ -0.15
SDHA-206ENST00000505555 RS1O15537 224 aa14.09□□□□□ -0.15
SDHA-206ENST00000505555 ZNF22P17026 224 aaPredicted RBP14.09□□□□□ -0.15
SDHA-206ENST00000505555 AMELXQ99217 191 aa14.09□□□□□ -0.15
SDHA-206ENST00000505555 CHCHD7Q9BUK0 85 aa14.09□□□□□ -0.15
SDHA-206ENST00000505555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.08□□□□□ -0.16
SDHA-206ENST00000505555 IGKV2-29A2NJV5 120 aaPredicted RBP14.08□□□□□ -0.16
SDHA-206ENST00000505555 RHODO00212 210 aa14.08□□□□□ -0.16
SDHA-206ENST00000505555 JMJD1CQ15652 2540 aa14.08□□□□□ -0.16
SDHA-206ENST00000505555 TRGV1A0A0A0MS02 117 aa14.07□□□□□ -0.16
SDHA-206ENST00000505555 PYGO1Q9Y3Y4 419 aa14.07□□□□□ -0.16
SDHA-206ENST00000505555 LGALS3P17931 250 aaKnown RBP14.06□□□□□ -0.16
SDHA-206ENST00000505555 FASNP49327 2511 aaKnown RBP14.06□□□□□ -0.16
SDHA-206ENST00000505555 F8W1H4 67 aa14.06□□□□□ -0.16
SDHA-206ENST00000505555 TEX48A0A1B0GUV7 120 aa14.05□□□□□ -0.16
SDHA-206ENST00000505555 UBE2D1P51668 147 aa14.05□□□□□ -0.16
SDHA-206ENST00000505555 COTL1Q14019 142 aa14.05□□□□□ -0.16
SDHA-206ENST00000505555 NOTCH3Q9UM47 2321 aa14.04□□□□□ -0.16
SDHA-206ENST00000505555 LEPROTO15243 131 aa14.04□□□□□ -0.16
SDHA-206ENST00000505555 WFDC2Q14508 124 aa14.04□□□□□ -0.16
SDHA-206ENST00000505555 Q6ZTI0 123 aa14.04□□□□□ -0.16
SDHA-206ENST00000505555 ZNF418Q8TF45 676 aaPredicted RBP14.04□□□□□ -0.16
SDHA-206ENST00000505555 UBE2D4Q9Y2X8 147 aa14.04□□□□□ -0.16
SDHA-206ENST00000505555 ADARB2-AS1A8MUL3 147 aa14.03□□□□□ -0.16
SDHA-206ENST00000505555 H3BMG7 143 aa14.03□□□□□ -0.16
SDHA-206ENST00000505555 GIG44P09565 113 aaPredicted RBP14.03□□□□□ -0.16
SDHA-206ENST00000505555 SLC25A29Q8N8R3 303 aa14.03□□□□□ -0.16
SDHA-206ENST00000505555 IL17DQ8TAD2 202 aa14.03□□□□□ -0.16
SDHA-206ENST00000505555 RPL35AP18077 110 aaKnown RBP14.03□□□□□ -0.16
SDHA-206ENST00000505555 HILS1P60008 231 aa14.03□□□□□ -0.16
SDHA-206ENST00000505555 RPL24P83731 157 aaKnown RBP14.03□□□□□ -0.16
SDHA-206ENST00000505555 DNAJC30Q96LL9 226 aa14.03□□□□□ -0.16
SDHA-206ENST00000505555 PRO0461Q9UI25 63 aa14.03□□□□□ -0.16
SDHA-206ENST00000505555 SPANXB1Q9NS25 103 aaPredicted RBP14.02□□□□□ -0.16
SDHA-206ENST00000505555 PGPEP1Q9NXJ5 209 aa14.02□□□□□ -0.16
SDHA-206ENST00000505555 GCN1Q92616 2671 aaKnown RBP14.02□□□□□ -0.17
SDHA-206ENST00000505555 TMEM238LA0A1B0GVL6 79 aa14.01□□□□□ -0.17
SDHA-206ENST00000505555 A6NJY4 79 aa14.01□□□□□ -0.17
SDHA-206ENST00000505555 APOMO95445 188 aa14.01□□□□□ -0.17
SDHA-206ENST00000505555 IGLV1-51P01701 117 aa14.01□□□□□ -0.17
SDHA-206ENST00000505555 IGHV3-30P01768 117 aa14.01□□□□□ -0.17
SDHA-206ENST00000505555 IGHV3-30-5P0DP03 117 aa14.01□□□□□ -0.17
SDHA-206ENST00000505555 MRPS36P82909 103 aaKnown RBP14□□□□□ -0.17
SDHA-206ENST00000505555 Q6ZUT4 128 aa14□□□□□ -0.17
SDHA-206ENST00000505555 NOP10Q9NPE3 64 aaKnown RBP14□□□□□ -0.17
SDHA-206ENST00000505555 SFTA2Q6UW10 78 aa14□□□□□ -0.17
SDHA-206ENST00000505555 TRAV8-3A0A0A6YYJ7 113 aa13.99□□□□□ -0.17
SDHA-206ENST00000505555 TMEM263Q8WUH6 116 aaKnown RBP13.99□□□□□ -0.17
SDHA-206ENST00000505555 SPANXA1Q9NS26 97 aa13.99□□□□□ -0.17
SDHA-206ENST00000505555 C19orf73Q9NVV2 129 aa13.99□□□□□ -0.17
SDHA-206ENST00000505555 IGHV3-30-3P0DP02 117 aa13.98□□□□□ -0.17
SDHA-206ENST00000505555 HECTD1Q9ULT8 2610 aa13.98□□□□□ -0.17
SDHA-206ENST00000505555 CRYBA4P53673 196 aa13.98□□□□□ -0.17
SDHA-206ENST00000505555 GAGE13Q4V321 117 aa13.98□□□□□ -0.17
SDHA-206ENST00000505555 KRTAP10-3P60369 221 aa13.97□□□□□ -0.17
SDHA-206ENST00000505555 C10orf126Q8N4M7 172 aa13.97□□□□□ -0.17
SDHA-206ENST00000505555 TIMM21Q9BVV7 248 aa13.97□□□□□ -0.17
SDHA-206ENST00000505555 TSPAN13O95857 204 aa13.96□□□□□ -0.17
SDHA-206ENST00000505555 MTURNQ8N3F0 131 aa13.96□□□□□ -0.17
SDHA-206ENST00000505555 HIVEP2P31629 2446 aa13.96□□□□□ -0.17
SDHA-206ENST00000505555 A8MZ25 164 aa13.96□□□□□ -0.17
SDHA-206ENST00000505555 CFC1BP0CG36 223 aa13.96□□□□□ -0.17
SDHA-206ENST00000505555 CFC1P0CG37 223 aa13.96□□□□□ -0.17
SDHA-206ENST00000505555 NDUFA11Q86Y39 141 aa13.96□□□□□ -0.17
SDHA-206ENST00000505555 CMC4P56277 68 aaPredicted RBP13.95□□□□□ -0.18
SDHA-206ENST00000505555 SH2D6Q7Z4S9 175 aa13.95□□□□□ -0.18
SDHA-206ENST00000505555 TINCRA0A1B0GVN0 87 aa13.94□□□□□ -0.18
SDHA-206ENST00000505555 PLAC8L1A1L4L8 177 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms