RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 A0A087WW49 117 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 IGKV1-12A0A0C4DH73 117 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 IGKV1D-12P01611 117 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 B3GALT5-AS1P59052 145 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 CHCHD10Q8WYQ3 142 aaPredicted RBP4.55□□□□□ -1.68
CLCN3-204ENST00000504131 CAMK2N2Q96S95 79 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 LOC101927531A0A1B0GV80 90 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 IGLV2-8P01709 118 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 MIR7-3HGQ8N6C7 128 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 C11orf1Q9H5F2 150 aa4.55□□□□□ -1.68
CLCN3-204ENST00000504131 NUP210Q8TEM1 1887 aaPredicted RBP4.55□□□□□ -1.68
CLCN3-204ENST00000504131 TET1Q8NFU7 2136 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 Q8TAT8 98 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 NLRC5Q86WI3 1866 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 EP300Q09472 2414 aaPredicted RBP4.54□□□□□ -1.68
CLCN3-204ENST00000504131 WISP2O76076 250 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 MSMBP08118 114 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 FAM27BQ5VT28 67 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 SPINK14Q6IE38 97 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 C1orf64Q8NEQ6 169 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 C1orf147Q96MC9 270 aaPredicted RBP4.54□□□□□ -1.68
CLCN3-204ENST00000504131 KLK9Q9UKQ9 250 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 IGLV3-32A0A0A0MS00 114 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 RNASE4P34096 147 aaKnown RBP4.54□□□□□ -1.68
CLCN3-204ENST00000504131 DSCR9P59020 149 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 FBXL19-AS1Q494R0 122 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 ASXL3Q9C0F0 2248 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 LYPD5Q6UWN5 251 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 PLA2G2DQ9UNK4 145 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 CACNA1BQ00975 2339 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 FAM229BQ4G0N7 80 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 CNTRLQ7Z7A1 2325 aa4.54□□□□□ -1.68
CLCN3-204ENST00000504131 PMS2P5A8MQ11 134 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 TTTY12Q9BZ98 90 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 C16orf95Q9H693 158 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 UBE2DNLQ8IWF7 75 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 DEFB108BQ8NET1 73 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 CCL19Q99731 98 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 CNOT1A5YKK6 2376 aaKnown RBP4.53□□□□□ -1.68
CLCN3-204ENST00000504131 TRBV6-5A0A0K0K1A5 114 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 ZNF503-AS2A6NEH8 195 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 LINC00271P0C7V0 271 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 PIP4P2Q8N4L2 257 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 ZGRF1Q86YA3 2104 aa4.53□□□□□ -1.68
CLCN3-204ENST00000504131 LINC01547P58512 204 aaPredicted RBP4.52□□□□□ -1.69
CLCN3-204ENST00000504131 C9orf66Q5T8R8 295 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 Q6ZQY7 126 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 THADAQ6YHU6 1953 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 RPL37AP8A6NKH3 93 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 IGHV4-38-2P0DP08 117 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 RPL39P5Q59GN2 51 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 FAM167A-AS1Q96KT0 104 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 U3KQK5 164 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 IGLV3-21P80748 117 aaPredicted RBP4.52□□□□□ -1.69
CLCN3-204ENST00000504131 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
CLCN3-204ENST00000504131 KLF14Q8TD94 323 aaPredicted RBP4.52□□□□□ -1.69
CLCN3-204ENST00000504131 TNRC6BQ9UPQ9 1833 aaKnown RBP4.52□□□□□ -1.69
CLCN3-204ENST00000504131 IBA57-AS1B1ANH7 110 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 PRCDQ00LT1 54 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 C17orf82Q86X59 251 aaPredicted RBP4.51□□□□□ -1.69
CLCN3-204ENST00000504131 IGHV4-59P01825 116 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 CHTF8P0CG12 524 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 LINC00337Q8N6G1 96 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 MUC6Q6W4X9 2439 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 ARHGAP32A7KAX9 2087 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 PI4KAP42356 2102 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 KIF26BQ2KJY2 2108 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 EIF4EBP1Q13541 118 aaPredicted RBP4.51□□□□□ -1.69
CLCN3-204ENST00000504131 MSRB1Q9NZV6 116 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 MINOS1-NBL1R4GNA1 71 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 C16orf90A8MZG2 172 aa4.51□□□□□ -1.69
CLCN3-204ENST00000504131 RNF223E7ERA6 249 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 ZNF702PQ9H963 129 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 BRWD1Q9NSI6 2320 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 IGHV4-61A0A0C4DH41 118 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 A0A0J9YWU9 116 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 A0A1B0GW54 56 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 IGKV1-39P01597 117 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 IGKV1D-39P04432 117 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 XAGE1AQ9HD64 81 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 TANC2Q9HCD6 1990 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 TCF20Q9UGU0 1960 aaKnown RBP4.5□□□□□ -1.69
CLCN3-204ENST00000504131 ACACAQ13085 2346 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 CACNA1HO95180 2353 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 CUL9Q8IWT3 2517 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 PCDH15Q96QU1 1955 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 PSCAO43653 123 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 ZNF295-AS1Q8N0V1 137 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 FER1L5A0AVI2 2057 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 AHCTF1Q8WYP5 2266 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 IGKV3-7A0A075B6H7 116 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 Q8N814 137 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 PTPRSQ13332 1948 aa4.5□□□□□ -1.69
CLCN3-204ENST00000504131 IGKV1-6A0A0C4DH72 117 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 Q8N9L7 120 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 LINC00476Q8WZB0 136 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 NDUFA4L2Q9NRX3 87 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 PLXNB3Q9ULL4 1909 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 BBC3Q96PG8 261 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms