RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 C6orf52Q5T4I8 152 aa0.72□□□□□ -2.29
SUB1-204ENST00000504016 WFDC6Q9BQY6 131 aa0.72□□□□□ -2.29
SUB1-204ENST00000504016 V9GYH0 126 aa0.72□□□□□ -2.29
SUB1-204ENST00000504016 C10orf71Q711Q0 1435 aa0.72□□□□□ -2.29
SUB1-204ENST00000504016 PI4KAP42356 2102 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 PHRF1Q9P1Y6 1649 aaKnown RBP0.71□□□□□ -2.3
SUB1-204ENST00000504016 NRKQ7Z2Y5 1582 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 ASH1LQ9NR48 2969 aaKnown RBP0.71□□□□□ -2.3
SUB1-204ENST00000504016 RBBP6Q7Z6E9 1792 aaKnown RBP0.71□□□□□ -2.3
SUB1-204ENST00000504016 CDK13Q14004 1512 aaKnown RBP0.71□□□□□ -2.3
SUB1-204ENST00000504016 NDUFC1O43677 76 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 GCHFRP30047 84 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 S100A3P33764 101 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 SNCAP37840 140 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 S100A10P60903 97 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 PKIAP61925 76 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 COL5A1-AS1Q5SY13 56 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 DPY30Q9C005 99 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 PHLPP1O60346 1717 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 RREB1Q92766 1687 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 CNTLNQ9NXG0 1405 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 AFDNP55196 1824 aaKnown RBP0.71□□□□□ -2.3
SUB1-204ENST00000504016 FOCADQ5VW36 1801 aa0.71□□□□□ -2.3
SUB1-204ENST00000504016 MYO7AQ13402 2215 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 CCNB3Q8WWL7 1395 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 ABCA1O95477 2261 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 A0A087WTM6 91 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 TRGV1A0A0A0MS02 117 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 CTXND1A0A1B0GTU2 59 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 F8VRH5 84 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 UQCR11O14957 56 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 TRAPPC2P0DI81 140 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 TRAPPC2BP0DI82 140 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 FAM167A-AS1Q96KT0 104 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 PROK2Q9HC23 129 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 FAIMQ9NVQ4 179 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 NAV3Q8IVL0 2385 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 SCAPERQ9BY12 1400 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 NSD3Q9BZ95 1437 aa0.7□□□□□ -2.3
SUB1-204ENST00000504016 TRAV1-2A0A0B4J238 106 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 CLPSL1A2RUU4 121 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 CRYM-AS1A6NIL9 109 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 CHKB-CPT1BH3BT56 60 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 M0R135 149 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 LY6G6CO95867 125 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 CCL18P55774 89 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 Q6ZRX8 168 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 BAGE2Q86Y30 109 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 Q96NJ1 140 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 Q9H521 79 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 MANBALQ9NQG1 85 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 PRO1854Q9UHT4 67 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 MED13LQ71F56 2210 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 NWD2Q9ULI1 1742 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 ARHGAP5Q13017 1502 aa0.69□□□□□ -2.3
SUB1-204ENST00000504016 GVQW2A0A096LPI5 108 aaPredicted RBP0.68□□□□□ -2.3
SUB1-204ENST00000504016 GNGT2O14610 69 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 SFT2D2O95562 160 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 MGPP08493 103 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 SEC11AP67812 179 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 VAMP8Q9BV40 100 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 NPVFQ9HCQ7 196 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 NDUFA4L2Q9NRX3 87 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 NRXN2Q9P2S2 1712 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 ZFYVE16Q7Z3T8 1539 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 JMJD1CQ15652 2540 aa0.68□□□□□ -2.3
SUB1-204ENST00000504016 TEX14Q8IWB6 1497 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 BCORL1Q5H9F3 1711 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 CADP27708 2225 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 ATOX1O00244 68 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 HMGN4O00479 90 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 UBA52P62987 128 aaKnown RBP0.67□□□□□ -2.3
SUB1-204ENST00000504016 Q0VG73 95 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 CFAP126Q5VTH2 177 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 C10orf95Q9H7T3 257 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 NXT2Q9NPJ8 142 aaKnown RBP0.67□□□□□ -2.3
SUB1-204ENST00000504016 LINC01558Q9Y6Z2 57 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 QRICH2Q9H0J4 1663 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 NOTCH1P46531 2555 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 SHANK2Q9UPX8 1470 aa0.67□□□□□ -2.3
SUB1-204ENST00000504016 TNS1Q9HBL0 1735 aaKnown RBP0.67□□□□□ -2.3
SUB1-204ENST00000504016 PARP14Q460N5 1801 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 PHIPQ8WWQ0 1821 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 DOCK11Q5JSL3 2073 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 CUL7Q14999 1698 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 IGLC7A0M8Q6 106 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 MPC2O95563 127 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 SAA2P0DJI9 122 aaPredicted RBP0.66□□□□□ -2.3
SUB1-204ENST00000504016 ASIPP42127 132 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 UBE2D3P61077 147 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 UBE2D2P62837 147 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 NCMAPQ5T1S8 102 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 UBE2DNLQ8IWF7 75 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 TSLPQ969D9 159 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 CDC42SE2Q9NRR3 84 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 LINC00474Q9P2X8 69 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 V9GYS6 101 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 ARAP2Q8WZ64 1704 aa0.66□□□□□ -2.3
SUB1-204ENST00000504016 MRC1P22897 1456 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms