RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TMEM263Q8WUH6 116 aaKnown RBP16.19■□□□□ 0.18
PCDH1-204ENST00000503492 RAB37Q96AX2 223 aa16.19■□□□□ 0.18
PCDH1-204ENST00000503492 DNAJC30Q96LL9 226 aa16.19■□□□□ 0.18
PCDH1-204ENST00000503492 TAL2Q16559 108 aa16.19■□□□□ 0.18
PCDH1-204ENST00000503492 NFE4Q86UQ8 179 aa16.19■□□□□ 0.18
PCDH1-204ENST00000503492 FAM104AQ969W3 186 aa16.19■□□□□ 0.18
PCDH1-204ENST00000503492 INAFM1C9JVW0 142 aa16.18■□□□□ 0.18
PCDH1-204ENST00000503492 HERVK_113P61574 105 aa16.18■□□□□ 0.18
PCDH1-204ENST00000503492 PYGO1Q9Y3Y4 419 aa16.18■□□□□ 0.18
PCDH1-204ENST00000503492 ZNF815PA8K554 130 aa16.18■□□□□ 0.18
PCDH1-204ENST00000503492 OR4C5Q8NGB2 326 aa16.18■□□□□ 0.18
PCDH1-204ENST00000503492 CHCHD7Q9BUK0 85 aa16.18■□□□□ 0.18
PCDH1-204ENST00000503492 Q6ZTI0 123 aa16.17■□□□□ 0.18
PCDH1-204ENST00000503492 NAA38Q9BRA0 125 aaKnown RBP16.17■□□□□ 0.18
PCDH1-204ENST00000503492 JMJD1CQ15652 2540 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 TRBV7-3A0A075B6L6 115 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 IGHV3-38A0A0C4DH36 116 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 PHLDA1Q8WV24 401 aaPredicted RBP16.16■□□□□ 0.18
PCDH1-204ENST00000503492 ZNF479Q96JC4 524 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 HIST1H4GQ99525 98 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 VCX2Q9H322 139 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 NOTCH2Q04721 2471 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 H3BUT2 72 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 SMIM13P0DJ93 91 aa16.16■□□□□ 0.18
PCDH1-204ENST00000503492 CEMP1Q6PRD7 247 aaPredicted RBP16.16■□□□□ 0.18
PCDH1-204ENST00000503492 NIPBLQ6KC79 2804 aaeCLIP16.16■□□□□ 0.18
PCDH1-204ENST00000503492 PLEKHB2Q96CS7 222 aa16.15■□□□□ 0.18
PCDH1-204ENST00000503492 PF4P02776 101 aa16.15■□□□□ 0.18
PCDH1-204ENST00000503492 LINC00482Q8N8I6 264 aa16.15■□□□□ 0.18
PCDH1-204ENST00000503492 TSPEAR-AS2P59090 65 aa16.14■□□□□ 0.17
PCDH1-204ENST00000503492 K7ERJ3 54 aa16.14■□□□□ 0.17
PCDH1-204ENST00000503492 CSNK1G2-AS1Q8NCQ2 148 aa16.14■□□□□ 0.17
PCDH1-204ENST00000503492 AMELXQ99217 191 aa16.14■□□□□ 0.17
PCDH1-204ENST00000503492 A0A0J9YXV3 536 aa16.13■□□□□ 0.17
PCDH1-204ENST00000503492 NOP10Q9NPE3 64 aaKnown RBP16.13■□□□□ 0.17
PCDH1-204ENST00000503492 NHP2Q9NX24 153 aaKnown RBP16.13■□□□□ 0.17
PCDH1-204ENST00000503492 PLAC8L1A1L4L8 177 aa16.13■□□□□ 0.17
PCDH1-204ENST00000503492 OTOGQ6ZRI0 2925 aa16.12■□□□□ 0.17
PCDH1-204ENST00000503492 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.12■□□□□ 0.17
PCDH1-204ENST00000503492 IGKV2-29A2NJV5 120 aaPredicted RBP16.12■□□□□ 0.17
PCDH1-204ENST00000503492 UBE2D4Q9Y2X8 147 aa16.12■□□□□ 0.17
PCDH1-204ENST00000503492 ZNF22P17026 224 aaPredicted RBP16.12■□□□□ 0.17
PCDH1-204ENST00000503492 COTL1Q14019 142 aa16.12■□□□□ 0.17
PCDH1-204ENST00000503492 TMEM223A0PJW6 202 aa16.11■□□□□ 0.17
PCDH1-204ENST00000503492 DAZ2Q13117 558 aaKnown RBP16.11■□□□□ 0.17
PCDH1-204ENST00000503492 SCGB1D4Q6XE38 83 aa16.11■□□□□ 0.17
PCDH1-204ENST00000503492 C1QTNF4Q9BXJ3 329 aa16.11■□□□□ 0.17
PCDH1-204ENST00000503492 NOTCH3Q9UM47 2321 aa16.11■□□□□ 0.17
PCDH1-204ENST00000503492 TRAV4A0A0B4J268 109 aa16.11■□□□□ 0.17
PCDH1-204ENST00000503492 CRYBA4P53673 196 aa16.1■□□□□ 0.17
PCDH1-204ENST00000503492 RNASE13Q5GAN3 156 aaKnown RBP16.1■□□□□ 0.17
PCDH1-204ENST00000503492 C16orf74Q96GX8 76 aa16.1■□□□□ 0.17
PCDH1-204ENST00000503492 SPANXA1Q9NS26 97 aa16.09■□□□□ 0.17
PCDH1-204ENST00000503492 J3QQQ9 107 aa16.08■□□□□ 0.16
PCDH1-204ENST00000503492 K7EQD1 137 aa16.08■□□□□ 0.16
PCDH1-204ENST00000503492 A0A1W2PPM0 123 aa16.07■□□□□ 0.16
PCDH1-204ENST00000503492 GAGE10A6NGK3 116 aa16.07■□□□□ 0.16
PCDH1-204ENST00000503492 MRPS36P82909 103 aaKnown RBP16.07■□□□□ 0.16
PCDH1-204ENST00000503492 C12orf74Q32Q52 190 aa16.07■□□□□ 0.16
PCDH1-204ENST00000503492 A0A0J9YY99 117 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 RRN3P1Q2M238 152 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 SPATA3Q8NHX4 192 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 LEPROTO15243 131 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 SAMD5Q5TGI4 173 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 Q6ZUT4 128 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 SLC25A29Q8N8R3 303 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 C2CD3Q4AC94 2353 aa16.06■□□□□ 0.16
PCDH1-204ENST00000503492 TRBV10-1A0A0K0K1A3 114 aa16.05■□□□□ 0.16
PCDH1-204ENST00000503492 FN1P02751 2386 aaKnown RBP16.05■□□□□ 0.16
PCDH1-204ENST00000503492 IGHV3-64A0A075B6Q5 118 aa16.05■□□□□ 0.16
PCDH1-204ENST00000503492 GAGE12BA1L429 117 aa16.05■□□□□ 0.16
PCDH1-204ENST00000503492 GAGE7O76087 117 aa16.05■□□□□ 0.16
PCDH1-204ENST00000503492 GAGE12FP0CL80 117 aa16.05■□□□□ 0.16
PCDH1-204ENST00000503492 GAGE12GP0CL81 117 aa16.05■□□□□ 0.16
PCDH1-204ENST00000503492 GAGE12IP0CL82 117 aa16.05■□□□□ 0.16
PCDH1-204ENST00000503492 LGALS3P17931 250 aaKnown RBP16.05■□□□□ 0.16
PCDH1-204ENST00000503492 RPL36AP83881 106 aaKnown RBP16.05■□□□□ 0.16
PCDH1-204ENST00000503492 RPL36ALQ969Q0 106 aaKnown RBP16.05■□□□□ 0.16
PCDH1-204ENST00000503492 K7EP34 96 aa16.04■□□□□ 0.16
PCDH1-204ENST00000503492 OVOL2Q9BRP0 275 aa16.04■□□□□ 0.16
PCDH1-204ENST00000503492 SRSF9Q13242 221 aaKnown RBP eCLIP16.03■□□□□ 0.16
PCDH1-204ENST00000503492 GTF2H5Q6ZYL4 71 aa16.03■□□□□ 0.16
PCDH1-204ENST00000503492 A0A1B0GWB2 263 aa16.02■□□□□ 0.16
PCDH1-204ENST00000503492 OR5A1Q8NGJ0 315 aa16.02■□□□□ 0.16
PCDH1-204ENST00000503492 TRGV2A0A075B6R0 118 aa16.02■□□□□ 0.15
PCDH1-204ENST00000503492 NSD1Q96L73 2696 aaPredicted RBP16.01■□□□□ 0.15
PCDH1-204ENST00000503492 GAGE12JA6NER3 117 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 FABP2P12104 132 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 UBE2D3P61077 147 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 UBE2D2P62837 147 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 GAGE4Q13068 117 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 GAGE5Q13069 117 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 GAGE13Q4V321 117 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 NTM-AS1Q6ZSK4 140 aa16.01■□□□□ 0.15
PCDH1-204ENST00000503492 IGLL5B9A064 214 aa16■□□□□ 0.15
PCDH1-204ENST00000503492 SPCS1Q9Y6A9 102 aa16■□□□□ 0.15
PCDH1-204ENST00000503492 TINCRA0A1B0GVN0 87 aa16■□□□□ 0.15
PCDH1-204ENST00000503492 DAZ4Q86SG3 579 aaKnown RBP16■□□□□ 0.15
PCDH1-204ENST00000503492 DAZ3Q9NR90 486 aaKnown RBP16■□□□□ 0.15
PCDH1-204ENST00000503492 TIMM21Q9BVV7 248 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms