RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 TRBV6-8A0A0A6YYG3 113 aa14.05□□□□□ -0.16
CDC42SE2-206ENST00000503291 FCER1GP30273 86 aa14.05□□□□□ -0.16
CDC42SE2-206ENST00000503291 TIRAPP58753 221 aa14.05□□□□□ -0.16
CDC42SE2-206ENST00000503291 TMEM97Q5BJF2 176 aa14.05□□□□□ -0.16
CDC42SE2-206ENST00000503291 NIT1Q86X76 327 aa14.05□□□□□ -0.16
CDC42SE2-206ENST00000503291 BAGE3Q86Y29 109 aa14.04□□□□□ -0.16
CDC42SE2-206ENST00000503291 URB1-AS1Q96HZ7 61 aa14.04□□□□□ -0.16
CDC42SE2-206ENST00000503291 LINC00614P0C842 121 aa14.03□□□□□ -0.16
CDC42SE2-206ENST00000503291 CCL18P55774 89 aa14.03□□□□□ -0.16
CDC42SE2-206ENST00000503291 FA2HQ7L5A8 372 aa14.03□□□□□ -0.16
CDC42SE2-206ENST00000503291 PLECQ15149 4684 aaKnown RBP14.03□□□□□ -0.16
CDC42SE2-206ENST00000503291 LELP1Q5T871 98 aa14.03□□□□□ -0.16
CDC42SE2-206ENST00000503291 AMTP48728 403 aa14.02□□□□□ -0.16
CDC42SE2-206ENST00000503291 LINC00588Q9Y4M8 146 aa14.02□□□□□ -0.16
CDC42SE2-206ENST00000503291 TRBV25-1A0A075B6N4 114 aa14.02□□□□□ -0.17
CDC42SE2-206ENST00000503291 IGHV1-24A0A0C4DH33 117 aa14.02□□□□□ -0.17
CDC42SE2-206ENST00000503291 RAB5BP61020 215 aa14.02□□□□□ -0.17
CDC42SE2-206ENST00000503291 LINC01546A6NGU7 62 aa14.01□□□□□ -0.17
CDC42SE2-206ENST00000503291 K7EMI3 77 aa14.01□□□□□ -0.17
CDC42SE2-206ENST00000503291 LAGE3Q14657 143 aa14.01□□□□□ -0.17
CDC42SE2-206ENST00000503291 CHCHD7Q9BUK0 85 aa14.01□□□□□ -0.17
CDC42SE2-206ENST00000503291 AP5S1Q9NUS5 200 aa14.01□□□□□ -0.17
CDC42SE2-206ENST00000503291 RNASEKQ6P5S7 137 aaKnown RBP14□□□□□ -0.17
CDC42SE2-206ENST00000503291 ESDP10768 282 aa14□□□□□ -0.17
CDC42SE2-206ENST00000503291 ORMDL2Q53FV1 153 aa13.99□□□□□ -0.17
CDC42SE2-206ENST00000503291 TMEM243Q9BU79 118 aa13.99□□□□□ -0.17
CDC42SE2-206ENST00000503291 SERF1AO75920 110 aa13.98□□□□□ -0.17
CDC42SE2-206ENST00000503291 CHCHD1Q96BP2 118 aaKnown RBP13.98□□□□□ -0.17
CDC42SE2-206ENST00000503291 CHCHD5Q9BSY4 110 aa13.98□□□□□ -0.17
CDC42SE2-206ENST00000503291 MRPS16Q9Y3D3 137 aaKnown RBP13.98□□□□□ -0.17
CDC42SE2-206ENST00000503291 TRAV8-6A0A0B4J262 113 aa13.97□□□□□ -0.17
CDC42SE2-206ENST00000503291 NDUFA6P56556 154 aa13.97□□□□□ -0.17
CDC42SE2-206ENST00000503291 LINC00310P59036 64 aa13.97□□□□□ -0.17
CDC42SE2-206ENST00000503291 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.97□□□□□ -0.17
CDC42SE2-206ENST00000503291 IGKV2-29A2NJV5 120 aaPredicted RBP13.97□□□□□ -0.17
CDC42SE2-206ENST00000503291 C20orf203Q8NBC4 194 aa13.97□□□□□ -0.17
CDC42SE2-206ENST00000503291 NUPR1O60356 82 aa13.96□□□□□ -0.17
CDC42SE2-206ENST00000503291 WFDC10BQ8IUB3 73 aa13.96□□□□□ -0.17
CDC42SE2-206ENST00000503291 UBE2DNLQ8IWF7 75 aa13.96□□□□□ -0.17
CDC42SE2-206ENST00000503291 BTF3P20290 206 aaKnown RBP13.95□□□□□ -0.18
CDC42SE2-206ENST00000503291 GAGE6Q13070 117 aa13.95□□□□□ -0.18
CDC42SE2-206ENST00000503291 PMCHL1Q16048 86 aa13.95□□□□□ -0.18
CDC42SE2-206ENST00000503291 TMEM262E9PQX1 116 aa13.94□□□□□ -0.18
CDC42SE2-206ENST00000503291 UBE2L6O14933 153 aa13.94□□□□□ -0.18
CDC42SE2-206ENST00000503291 HSBP1O75506 76 aa13.94□□□□□ -0.18
CDC42SE2-206ENST00000503291 RPL39P62891 51 aaKnown RBP13.94□□□□□ -0.18
CDC42SE2-206ENST00000503291 UPK3BQ9BT76 320 aa13.94□□□□□ -0.18
CDC42SE2-206ENST00000503291 LYSTQ99698 3801 aa13.94□□□□□ -0.18
CDC42SE2-206ENST00000503291 COA6Q5JTJ3 125 aaKnown RBP13.93□□□□□ -0.18
CDC42SE2-206ENST00000503291 C2orf66Q6UXQ4 117 aa13.93□□□□□ -0.18
CDC42SE2-206ENST00000503291 TMEM18Q96B42 140 aa13.93□□□□□ -0.18
CDC42SE2-206ENST00000503291 H7C423 109 aa13.92□□□□□ -0.18
CDC42SE2-206ENST00000503291 G0S2P27469 103 aa13.92□□□□□ -0.18
CDC42SE2-206ENST00000503291 A0A096LNJ9 63 aa13.91□□□□□ -0.18
CDC42SE2-206ENST00000503291 FAM19A2Q8N3H0 131 aa13.91□□□□□ -0.18
CDC42SE2-206ENST00000503291 CYSLTR1Q9Y271 337 aa13.91□□□□□ -0.18
CDC42SE2-206ENST00000503291 FGF6P10767 208 aa13.91□□□□□ -0.18
CDC42SE2-206ENST00000503291 Q9H8V8 135 aa13.91□□□□□ -0.18
CDC42SE2-206ENST00000503291 SIVA1O15304 175 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 LGALS9CQ6DKI2 356 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 Q8N3U1 123 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 A0A087WX48 190 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 HBDP02042 147 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 MPV17L2Q567V2 206 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 TOMM6Q96B49 74 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 UBE2D4Q9Y2X8 147 aa13.9□□□□□ -0.18
CDC42SE2-206ENST00000503291 S100A6P06703 90 aa13.89□□□□□ -0.19
CDC42SE2-206ENST00000503291 AMMECR1LQ6DCA0 310 aa13.89□□□□□ -0.19
CDC42SE2-206ENST00000503291 Q8N976 141 aa13.89□□□□□ -0.19
CDC42SE2-206ENST00000503291 DNAH10OSP0CZ25 163 aa13.88□□□□□ -0.19
CDC42SE2-206ENST00000503291 PKIAP61925 76 aa13.88□□□□□ -0.19
CDC42SE2-206ENST00000503291 RBX1P62877 108 aa13.88□□□□□ -0.19
CDC42SE2-206ENST00000503291 MRPL52Q86TS9 123 aaKnown RBP13.88□□□□□ -0.19
CDC42SE2-206ENST00000503291 TMA7Q9Y2S6 64 aaKnown RBP13.88□□□□□ -0.19
CDC42SE2-206ENST00000503291 A0A1B0GUV1 79 aa13.87□□□□□ -0.19
CDC42SE2-206ENST00000503291 IGHV3-30P01768 117 aa13.87□□□□□ -0.19
CDC42SE2-206ENST00000503291 IGHV3-33P01772 117 aa13.87□□□□□ -0.19
CDC42SE2-206ENST00000503291 IGHV3-30-3P0DP02 117 aa13.87□□□□□ -0.19
CDC42SE2-206ENST00000503291 IGHV3-30-5P0DP03 117 aa13.87□□□□□ -0.19
CDC42SE2-206ENST00000503291 LINC01556Q5JQF7 62 aa13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 DGAT2L7PQ6IED9 249 aa13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 TIMM21Q9BVV7 248 aa13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 IGLV4-60A0A075B6I1 120 aa13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 LY6G6CO95867 125 aa13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 ZNF25P17030 456 aaPredicted RBP13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 LINC00476Q8WZB0 136 aa13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 CSDC2Q9Y534 153 aaKnown RBP13.86□□□□□ -0.19
CDC42SE2-206ENST00000503291 LINC01549A6NIU2 74 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 IGIPA6NJ69 53 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 SMAGPQ0VAQ4 97 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 TMEM101Q96IK0 257 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 SCGB3A1Q96QR1 104 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 SPANXA1Q9NS26 97 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 PYGO1Q9Y3Y4 419 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 OR5A1Q8NGJ0 315 aa13.85□□□□□ -0.19
CDC42SE2-206ENST00000503291 PDZD11Q5EBL8 140 aa13.84□□□□□ -0.19
CDC42SE2-206ENST00000503291 ERASQ7Z444 233 aa13.84□□□□□ -0.19
CDC42SE2-206ENST00000503291 OPRPNQ99935 248 aaPredicted RBP13.84□□□□□ -0.19
CDC42SE2-206ENST00000503291 SNRPEP62304 92 aaKnown RBP13.83□□□□□ -0.2
CDC42SE2-206ENST00000503291 FAM104AQ969W3 186 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms