RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 COX7CP15954 63 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 RPL13AP40429 203 aaKnown RBP3.87□□□□□ -1.79
CLDND1-208ENST00000503004 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 C10orf105Q8TEF2 133 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 PLEKHB2Q96CS7 222 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 U3KQE9 123 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 V9GYY9 64 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 UBR5O95071 2799 aaPredicted RBP3.87□□□□□ -1.79
CLDND1-208ENST00000503004 NOTCH3Q9UM47 2321 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 APCP25054 2843 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 NDUFA11Q86Y39 141 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 MAPK1IP1LQ8NDC0 245 aa3.87□□□□□ -1.79
CLDND1-208ENST00000503004 ZNF815PA8K554 130 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 SPANXN1Q5VSR9 72 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 AKAP9Q99996 3911 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 FAM236DA0A1B0GTK5 79 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 FAM223BA6NKX1 122 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 M0R381 172 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 IGHG2P01859 326 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 MSMBP08118 114 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 FAM236CP0DP71 79 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 SLC25A16P16260 332 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 ZNF22P17026 224 aaPredicted RBP3.86□□□□□ -1.79
CLDND1-208ENST00000503004 ZNF415Q09FC8 603 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 HIST2H2BCQ6DN03 193 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 HIST2H2BDQ6DRA6 164 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 C10orf99Q6UWK7 81 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 C9orf47Q6ZRZ4 202 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 FAM223AQ8IWN6 122 aa3.86□□□□□ -1.79
CLDND1-208ENST00000503004 WNK1Q9H4A3 2382 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 J3QQQ9 107 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 ELANEP08246 267 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 PFN2P35080 140 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 MYOZ3Q8TDC0 251 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 MTORP42345 2549 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 H3BMM0 161 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 NDUFA4O00483 81 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 TRACP01848 142 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 CFC1BP0CG36 223 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 CFC1P0CG37 223 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 C9orf139Q6ZV77 190 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 ZFAND2AQ8N6M9 145 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 UBE2WQ96B02 151 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 LINC01600Q96MT4 127 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 RHPN1-AS1Q9BWJ2 59 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 FAM30AQ9NZY2 134 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 A6NDX4 124 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 SOCS3O14543 225 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 PRB1P04280 392 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 TMEM258P61165 79 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 LINC01620Q4KN68 170 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 MRPL53Q96EL3 112 aaKnown RBP3.85□□□□□ -1.79
CLDND1-208ENST00000503004 SPANXCQ9NY87 97 aa3.85□□□□□ -1.79
CLDND1-208ENST00000503004 ACANP16112 2415 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 MUC4Q99102 2169 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 IGLV2-18A0A075B6J9 118 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 GNRH2O43555 120 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 IGHV4-59P01825 116 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 S100A4P26447 101 aaKnown RBP3.84□□□□□ -1.79
CLDND1-208ENST00000503004 RNASE4P34096 147 aaKnown RBP3.84□□□□□ -1.79
CLDND1-208ENST00000503004 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 C6orf226Q5I0X4 101 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 C14orf178Q8N769 122 aaPredicted RBP3.84□□□□□ -1.79
CLDND1-208ENST00000503004 NRACQ8N912 160 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 NXT2Q9NPJ8 142 aaKnown RBP3.84□□□□□ -1.79
CLDND1-208ENST00000503004 FLNAP21333 2647 aaKnown RBP3.84□□□□□ -1.79
CLDND1-208ENST00000503004 ITPR3Q14573 2671 aa3.84□□□□□ -1.79
CLDND1-208ENST00000503004 JMJD1CQ15652 2540 aa3.84□□□□□ -1.8
CLDND1-208ENST00000503004 HERVK_113P61574 105 aa3.84□□□□□ -1.8
CLDND1-208ENST00000503004 Q1RN00 199 aa3.84□□□□□ -1.8
CLDND1-208ENST00000503004 IL17DQ8TAD2 202 aa3.84□□□□□ -1.8
CLDND1-208ENST00000503004 SMCR5Q8TEV8 140 aa3.84□□□□□ -1.8
CLDND1-208ENST00000503004 IMUPQ9GZP8 106 aa3.84□□□□□ -1.8
CLDND1-208ENST00000503004 DAZ1Q9NQZ3 744 aaKnown RBP3.84□□□□□ -1.8
CLDND1-208ENST00000503004 TRBV10-2A0A0K0K1G8 114 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 FAM240AA0A1B0GVK7 77 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 B4DSR2 109 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 IGLV1-40P01703 118 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 DEFB112Q30KQ8 113 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 C1orf195Q5TG92 126 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 Q8N8P6 123 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 RPL39LQ96EH5 51 aaKnown RBP3.83□□□□□ -1.8
CLDND1-208ENST00000503004 USMG5Q96IX5 58 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 C9orf85Q96MD7 179 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 ZNF256Q9Y2P7 627 aaPredicted RBP3.83□□□□□ -1.8
CLDND1-208ENST00000503004 PHLDA3Q9Y5J5 127 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 TENM4Q6N022 2769 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 TRAV13-1A0A0B4J241 112 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 TRAV21A0A0B4J279 112 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 LINC01546A6NGU7 62 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 IGKV3-20P01619 116 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 LINC01561Q8N1V8 128 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 ITPR2Q14571 2701 aa3.83□□□□□ -1.8
CLDND1-208ENST00000503004 MGPP08493 103 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 RNASE3P12724 160 aaKnown RBP3.82□□□□□ -1.8
CLDND1-208ENST00000503004 PLNP26678 52 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 LAGE3Q14657 143 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 CD164L2Q6UWJ8 174 aa3.82□□□□□ -1.8
CLDND1-208ENST00000503004 C2CD3Q4AC94 2353 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms