RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 FER1L6-AS1Q8NA97 138 aa4.57□□□□□ -1.68
VPS45-210ENST00000497638 C20orf203Q8NBC4 194 aa4.57□□□□□ -1.68
VPS45-210ENST00000497638 DIRC1Q969H9 104 aa4.57□□□□□ -1.68
VPS45-210ENST00000497638 DERL1Q9BUN8 251 aa4.57□□□□□ -1.68
VPS45-210ENST00000497638 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 KRBOX1C9JBD0 128 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 H3BMQ9 156 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 S100A5P33763 92 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 BTCP35070 178 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 RAB5CP51148 216 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 INO80EQ8NBZ0 244 aaPredicted RBP4.56□□□□□ -1.68
VPS45-210ENST00000497638 GFRA4Q9GZZ7 299 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 EPDR1Q9UM22 224 aa4.56□□□□□ -1.68
VPS45-210ENST00000497638 GRIFINA4D1Z8 144 aa4.55□□□□□ -1.68
VPS45-210ENST00000497638 M0R036 132 aa4.55□□□□□ -1.68
VPS45-210ENST00000497638 NOL3O60936 208 aaKnown RBP4.55□□□□□ -1.68
VPS45-210ENST00000497638 MT-ND6P03923 174 aa4.55□□□□□ -1.68
VPS45-210ENST00000497638 ARL14EPLP0DKL9 152 aa4.55□□□□□ -1.68
VPS45-210ENST00000497638 SULT1A2P50226 295 aa4.55□□□□□ -1.68
VPS45-210ENST00000497638 AQP10Q96PS8 301 aa4.55□□□□□ -1.68
VPS45-210ENST00000497638 ARL2-SNX15V9GYD0 113 aa4.55□□□□□ -1.68
VPS45-210ENST00000497638 IGLV4-60A0A075B6I1 120 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 TRAV1-1A0A0B4J248 108 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 RPL13AP40429 203 aaKnown RBP4.54□□□□□ -1.68
VPS45-210ENST00000497638 Q86TA4 180 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 SUN5Q8TC36 379 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 SCGB1C1Q8TD33 95 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 SEC22CQ9BRL7 303 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 TMEM243Q9BU79 118 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 CTDSP1Q9GZU7 261 aa4.54□□□□□ -1.68
VPS45-210ENST00000497638 H0Y9J4 135 aa4.53□□□□□ -1.68
VPS45-210ENST00000497638 HMGB3O15347 200 aaKnown RBP4.53□□□□□ -1.68
VPS45-210ENST00000497638 SH2D1AO60880 128 aa4.53□□□□□ -1.68
VPS45-210ENST00000497638 UBE2D1P51668 147 aa4.53□□□□□ -1.68
VPS45-210ENST00000497638 C1orf137Q5JT78 98 aa4.53□□□□□ -1.68
VPS45-210ENST00000497638 FAM162BQ5T6X4 162 aa4.53□□□□□ -1.68
VPS45-210ENST00000497638 COX8CQ7Z4L0 72 aa4.53□□□□□ -1.68
VPS45-210ENST00000497638 CARD19Q96LW7 228 aa4.53□□□□□ -1.68
VPS45-210ENST00000497638 TMSB15BA0A087X1C1 80 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 TRAV34A0A0B4J273 112 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 STAG3L2P0CL84 134 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 STAG3L3P0CL85 134 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 GCHFRP30047 84 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 CDC34P49427 236 aaPredicted RBP4.52□□□□□ -1.69
VPS45-210ENST00000497638 CRIP1P50238 77 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 LINC01547P58512 204 aaPredicted RBP4.52□□□□□ -1.69
VPS45-210ENST00000497638 ZNF471Q9BX82 626 aaPredicted RBP4.52□□□□□ -1.69
VPS45-210ENST00000497638 MED28Q9H204 178 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 TMEM167BQ9NRX6 74 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 HSPB11Q9Y547 144 aa4.52□□□□□ -1.69
VPS45-210ENST00000497638 A0A1W2PRE2 83 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 UBE2L6O14933 153 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 KRTAP1-4P0C5Y4 121 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 KRTAP5-9P26371 169 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 ZNF674Q2M3X9 581 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 OR10AG1Q8NH19 301 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 CHCHD10Q8WYQ3 142 aaPredicted RBP4.51□□□□□ -1.69
VPS45-210ENST00000497638 NUDT15Q9NV35 164 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 ZFP30Q9Y2G7 519 aa4.51□□□□□ -1.69
VPS45-210ENST00000497638 IGKV3OR2-268A0A0C4DH90 116 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 LOC107984640A0A0U1RRK4 108 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 PEX7O00628 323 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 CXCL1P09341 107 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 SMIM17P0DL12 118 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 SYCNQ0VAF6 134 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 LRRC37A5PQ49AS3 106 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 PGLYRP4Q96LB8 373 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 AP1S3Q96PC3 154 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 MUC17Q685J3 4493 aa4.5□□□□□ -1.69
VPS45-210ENST00000497638 IGHV1-58A0A0C4DH39 117 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 A0A1W2PNN7 141 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 LYRM1O43325 122 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 CXorf1O96002 111 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 FGF6P10767 208 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 IL7P13232 177 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 RPL12P30050 165 aaKnown RBP4.49□□□□□ -1.69
VPS45-210ENST00000497638 EIF5AP63241 154 aaKnown RBP4.49□□□□□ -1.69
VPS45-210ENST00000497638 CYCSP99999 105 aaKnown RBP4.49□□□□□ -1.69
VPS45-210ENST00000497638 GAGE2BQ13066 116 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 PAPPA-AS1Q5QFB9 102 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 SPANXN1Q5VSR9 72 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 HIST1H2BAQ96A08 127 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 SMIM3Q9BZL3 60 aa4.49□□□□□ -1.69
VPS45-210ENST00000497638 CARHSP1Q9Y2V2 147 aaKnown RBP4.49□□□□□ -1.69
VPS45-210ENST00000497638 M0QY20 66 aa4.48□□□□□ -1.69
VPS45-210ENST00000497638 SNAI2O43623 268 aa4.48□□□□□ -1.69
VPS45-210ENST00000497638 OR5AL1P0C617 328 aa4.48□□□□□ -1.69
VPS45-210ENST00000497638 C9orf116Q5BN46 136 aaPredicted RBP4.48□□□□□ -1.69
VPS45-210ENST00000497638 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
VPS45-210ENST00000497638 TSKUQ8WUA8 353 aa4.48□□□□□ -1.69
VPS45-210ENST00000497638 ISOC2Q96AB3 205 aa4.48□□□□□ -1.69
VPS45-210ENST00000497638 FMC1Q96HJ9 113 aa4.48□□□□□ -1.69
VPS45-210ENST00000497638 SDHCQ99643 169 aaPredicted RBP4.48□□□□□ -1.69
VPS45-210ENST00000497638 NKX6-2Q9C056 277 aaPredicted RBP4.48□□□□□ -1.69
VPS45-210ENST00000497638 PLA2G10O15496 165 aa4.47□□□□□ -1.69
VPS45-210ENST00000497638 SIX6O95475 246 aa4.47□□□□□ -1.69
VPS45-210ENST00000497638 TSPAN13O95857 204 aa4.47□□□□□ -1.69
VPS45-210ENST00000497638 MBP02144 154 aa4.47□□□□□ -1.69
VPS45-210ENST00000497638 PET100P0DJ07 73 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms