RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 CBLN2Q8IUK8 224 aa9.81□□□□□ -0.84
USP11-212ENST00000497179 SMCO4Q9NRQ5 59 aa9.81□□□□□ -0.84
USP11-212ENST00000497179 LAMTOR2Q9Y2Q5 125 aa9.81□□□□□ -0.84
USP11-212ENST00000497179 DNAH17Q9UFH2 4485 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 TRAV9-2A0A087WT02 112 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 TSHBP01222 138 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 APCSP02743 223 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 PMCHP20382 165 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 AMTP48728 403 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 PKIAP61925 76 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 CHCHD5Q9BSY4 110 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
USP11-212ENST00000497179 VCYO14598 125 aa9.79□□□□□ -0.84
USP11-212ENST00000497179 Q8N3U1 123 aa9.79□□□□□ -0.84
USP11-212ENST00000497179 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
USP11-212ENST00000497179 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
USP11-212ENST00000497179 TMEM243Q9BU79 118 aa9.79□□□□□ -0.84
USP11-212ENST00000497179 IGHV3-30P01768 117 aa9.78□□□□□ -0.84
USP11-212ENST00000497179 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
USP11-212ENST00000497179 IGHV3-30-3P0DP02 117 aa9.78□□□□□ -0.84
USP11-212ENST00000497179 IGHV3-30-5P0DP03 117 aa9.78□□□□□ -0.84
USP11-212ENST00000497179 BTF3P20290 206 aaKnown RBP9.78□□□□□ -0.84
USP11-212ENST00000497179 SMIM2Q9BVW6 85 aa9.78□□□□□ -0.84
USP11-212ENST00000497179 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
USP11-212ENST00000497179 A0A087WX48 190 aa9.77□□□□□ -0.85
USP11-212ENST00000497179 PRSS47A8MTI9 375 aa9.77□□□□□ -0.85
USP11-212ENST00000497179 GAGE6Q13070 117 aa9.77□□□□□ -0.85
USP11-212ENST00000497179 TMEM262E9PQX1 116 aa9.76□□□□□ -0.85
USP11-212ENST00000497179 ESDP10768 282 aa9.76□□□□□ -0.85
USP11-212ENST00000497179 KIAA1644Q3SXP7 199 aa9.76□□□□□ -0.85
USP11-212ENST00000497179 MPV17L2Q567V2 206 aa9.76□□□□□ -0.85
USP11-212ENST00000497179 C6orf223Q8N319 242 aa9.76□□□□□ -0.85
USP11-212ENST00000497179 KIR2DL4Q99706 377 aa9.76□□□□□ -0.85
USP11-212ENST00000497179 MAP1LC3AQ9H492 121 aa9.76□□□□□ -0.85
USP11-212ENST00000497179 IBA57-AS1B1ANH7 110 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 UBE2L6O14933 153 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 TCAPO15273 167 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 FCER1GP30273 86 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 FABP9Q0Z7S8 132 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 LAGE3Q14657 143 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 C1orf134Q5TEV5 83 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
USP11-212ENST00000497179 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
USP11-212ENST00000497179 H7C423 109 aa9.74□□□□□ -0.85
USP11-212ENST00000497179 RBX1P62877 108 aa9.74□□□□□ -0.85
USP11-212ENST00000497179 ALKBH7Q9BT30 221 aaPredicted RBP9.74□□□□□ -0.85
USP11-212ENST00000497179 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.73□□□□□ -0.85
USP11-212ENST00000497179 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
USP11-212ENST00000497179 IGKV2-29A2NJV5 120 aaPredicted RBP9.73□□□□□ -0.85
USP11-212ENST00000497179 RTL8CO15255 209 aa9.73□□□□□ -0.85
USP11-212ENST00000497179 Q8N8P6 123 aa9.73□□□□□ -0.85
USP11-212ENST00000497179 Q8N976 141 aa9.73□□□□□ -0.85
USP11-212ENST00000497179 LOC389332A0A1B0GUA5 103 aa9.72□□□□□ -0.85
USP11-212ENST00000497179 ATP6V1G1O75348 118 aa9.72□□□□□ -0.85
USP11-212ENST00000497179 NFE4Q86UQ8 179 aa9.72□□□□□ -0.85
USP11-212ENST00000497179 KLK12Q9UKR0 248 aa9.72□□□□□ -0.85
USP11-212ENST00000497179 SCO1O75880 301 aa9.71□□□□□ -0.86
USP11-212ENST00000497179 S100A1P23297 94 aa9.71□□□□□ -0.86
USP11-212ENST00000497179 Q6ZRN7 208 aaPredicted RBP9.71□□□□□ -0.86
USP11-212ENST00000497179 C20orf203Q8NBC4 194 aa9.71□□□□□ -0.86
USP11-212ENST00000497179 NXT2Q9NPJ8 142 aaKnown RBP9.71□□□□□ -0.86
USP11-212ENST00000497179 COLCA2A8K830 154 aa9.7□□□□□ -0.86
USP11-212ENST00000497179 ANGP03950 147 aaKnown RBP9.7□□□□□ -0.86
USP11-212ENST00000497179 FGF6P10767 208 aa9.7□□□□□ -0.86
USP11-212ENST00000497179 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
USP11-212ENST00000497179 AMMECR1LQ6DCA0 310 aa9.7□□□□□ -0.86
USP11-212ENST00000497179 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
USP11-212ENST00000497179 IGLV4-60A0A075B6I1 120 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 TRAV8-3A0A0A6YYJ7 113 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 K7EMI3 77 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 RAB5AP20339 215 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
USP11-212ENST00000497179 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 UBE2WQ96B02 151 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 Q9HAA7 133 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 PRR34Q9NV39 138 aa9.69□□□□□ -0.86
USP11-212ENST00000497179 HECTD4Q9Y4D8 3996 aa9.68□□□□□ -0.86
USP11-212ENST00000497179 CRPP02741 224 aa9.68□□□□□ -0.86
USP11-212ENST00000497179 IFI27P40305 119 aaPredicted RBP9.68□□□□□ -0.86
USP11-212ENST00000497179 SMAGPQ0VAQ4 97 aa9.68□□□□□ -0.86
USP11-212ENST00000497179 Q0VG73 95 aa9.68□□□□□ -0.86
USP11-212ENST00000497179 ENHOQ6UWT2 76 aa9.68□□□□□ -0.86
USP11-212ENST00000497179 LINC00269Q8N2A0 174 aa9.68□□□□□ -0.86
USP11-212ENST00000497179 TMEM18Q96B42 140 aa9.68□□□□□ -0.86
USP11-212ENST00000497179 DNAH11Q96DT5 4516 aa9.67□□□□□ -0.86
USP11-212ENST00000497179 ORMDL2Q53FV1 153 aa9.67□□□□□ -0.86
USP11-212ENST00000497179 C18orf32Q8TCD1 76 aa9.67□□□□□ -0.86
USP11-212ENST00000497179 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
USP11-212ENST00000497179 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
USP11-212ENST00000497179 UBE2D4Q9Y2X8 147 aa9.67□□□□□ -0.86
USP11-212ENST00000497179 PKD1P98161 4303 aa9.67□□□□□ -0.86
USP11-212ENST00000497179 LINC01546A6NGU7 62 aa9.66□□□□□ -0.86
USP11-212ENST00000497179 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
USP11-212ENST00000497179 MIAQ16674 131 aa9.66□□□□□ -0.86
USP11-212ENST00000497179 OR5A1Q8NGJ0 315 aa9.66□□□□□ -0.86
USP11-212ENST00000497179 PRSS3P2Q8NHM4 247 aa9.66□□□□□ -0.86
USP11-212ENST00000497179 RMI2Q96E14 147 aa9.66□□□□□ -0.86
USP11-212ENST00000497179 CSDC2Q9Y534 153 aaKnown RBP9.66□□□□□ -0.86
USP11-212ENST00000497179 PRSS29PA6NIE9 313 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 268.7 ms