RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 DPM2O94777 84 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 IGKV1-5P01602 117 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 IGHV1-46P01743 117 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 HLA-DRB4P13762 266 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 CBLN1P23435 193 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 INSL3P51460 131 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 LGALS9BQ3B8N2 356 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 C9orf153Q5TBE3 101 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 LINC01545Q5VT33 79 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 Q5XG85 94 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 LGALS9CQ6DKI2 356 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 KTN1-AS1Q86SY8 53 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 C10orf126Q8N4M7 172 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 MYOZ3Q8TDC0 251 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 HLA-DRB4X5D2U9 266 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 SMG1Q96Q15 3661 aaKnown RBP2.76□□□□□ -1.97
SF3B1-212ENST00000496458 USP9XQ93008 2570 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-212ENST00000496458 MAP1AP78559 2803 aaPredicted RBP2.76□□□□□ -1.97
SF3B1-212ENST00000496458 PTPN13Q12923 2485 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 NAV2Q8IVL1 2488 aa2.76□□□□□ -1.97
SF3B1-212ENST00000496458 SETXQ7Z333 2677 aaKnown RBP2.75□□□□□ -1.97
SF3B1-212ENST00000496458 UTP20O75691 2785 aaKnown RBP2.75□□□□□ -1.97
SF3B1-212ENST00000496458 DNAJC13O75165 2243 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 IGKV1D-43A0A0B4J1Z2 117 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 TRBV7-7A0A0K0K1E9 115 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 CTXND1A0A1B0GTU2 59 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 OVOL1O14753 267 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 RBP4P02753 201 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 PSMB8P28062 276 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 HLA-DMBP28068 263 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 PLGLB1Q02325 96 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.75□□□□□ -1.97
SF3B1-212ENST00000496458 HRCT1Q6UXD1 115 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 ZFAND2AQ8N6M9 145 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 DPH3Q96FX2 82 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 ZC2HC1AQ96GY0 325 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 TP73-AS1Q9UF72 201 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 LINC00588Q9Y4M8 146 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 BAHCC1Q9P281 2608 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 HECTD1Q9ULT8 2610 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 COL12A1Q99715 3063 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 ZGRF1Q86YA3 2104 aa2.75□□□□□ -1.97
SF3B1-212ENST00000496458 HIVEP3Q5T1R4 2406 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 TRAV41A0A0B4J266 112 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 A8MWP4 228 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 ZNF73O43830 326 aaPredicted RBP2.74□□□□□ -1.97
SF3B1-212ENST00000496458 LEPROTL1O95214 131 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 P0DMU3 169 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 FAM231AP0DMU4 169 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 FAM231CP0DMU5 169 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 IGHV3-30-3P0DP02 117 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 CCL4P13236 92 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 NPPCP23582 126 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 DYNLT3P51808 116 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 QRFPP83859 136 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 SLC38A11Q08AI6 406 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 MRPL51Q4U2R6 128 aaKnown RBP2.74□□□□□ -1.97
SF3B1-212ENST00000496458 TMEM14EPQ6UXP3 125 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 LCA10Q71F78 164 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 LYPD6Q86Y78 171 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 FAM19A2Q8N3H0 131 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 DAND5Q8N907 189 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 C15orf53Q8NAA6 179 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 OR5C1Q8NGR4 320 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 OR10AC1Q8NH08 325 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 CARD19Q96LW7 228 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 OSTCQ9NRP0 149 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 USP9YO00507 2555 aaPredicted RBP2.74□□□□□ -1.97
SF3B1-212ENST00000496458 ESPL1Q14674 2120 aa2.74□□□□□ -1.97
SF3B1-212ENST00000496458 POLEQ07864 2286 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 TENM4Q6N022 2769 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 IGLV3-12A0A075B6K2 115 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 FAM24AA6NFZ4 105 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 A8MWV9 139 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 LY6LH3BQJ8 138 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 UBE2L6O14933 153 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 NDUFB2O95178 105 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 LHBP01229 141 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 PPYP01298 95 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 TRACP01848 142 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 COX7CP15954 63 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 CSN1S1P47710 185 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 FOXA3P55318 350 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-212ENST00000496458 TSPEAR-AS2P59090 65 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 RPL30P62888 115 aaKnown RBP2.73□□□□□ -1.97
SF3B1-212ENST00000496458 EIF3IQ13347 325 aaKnown RBP2.73□□□□□ -1.97
SF3B1-212ENST00000496458 MYO7BQ6PIF6 2116 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 PRR15Q8IV56 129 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 SPANXA2-OT1Q8N9U9 137 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 GPX7Q96SL4 187 aaPredicted RBP2.73□□□□□ -1.97
SF3B1-212ENST00000496458 LINC00574Q9H8X3 128 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 HILPDAQ9Y5L2 63 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 V9GYV3 84 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 DOPEY2Q9Y3R5 2298 aa2.73□□□□□ -1.97
SF3B1-212ENST00000496458 SMIM27A0A1W2PRY6 76 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 TCRBV4S1A1TA0A5B7 111 aa2.72□□□□□ -1.97
SF3B1-212ENST00000496458 TMEM14DPA8MWL7 114 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms