RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LINC01549A6NIU2 74 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 H7C1H1 209 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 UQCRQO14949 82 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 SLC25A20O43772 301 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 ACYP1P07311 99 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 P0DMU3 169 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 FAM231AP0DMU4 169 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 FAM231CP0DMU5 169 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 ORM2P19652 201 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 HLA-DMBP28068 263 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 LEPP41159 167 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 KLK9Q2XQG4 91 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 PAPPA-AS1Q5QFB9 102 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 CLEC19AQ6UXS0 136 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 UNQ9165/PRO28630Q6UXU0 137 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 LINC00305Q7Z4B0 112 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 Q8N8P6 123 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 SGK494Q96LW2 274 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 LINC01587Q99440 93 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 PPDPFQ9H3Y8 114 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 KLK9Q9UKQ9 250 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 KMT2AQ03164 3969 aa6.05□□□□□ -1.44
HDAC6-234ENST00000493923 IGKV1OR2-108A0A075B7D4 117 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 IGHV3-21A0A0B4J1V1 117 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 F8VRH5 84 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 K7EMI3 77 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 M0R2P5 195 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 HERVK_113P61574 105 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 TMEM170BQ5T4T1 132 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 C15orf53Q8NAA6 179 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 ZNRF2Q8NHG8 242 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 AAMDCQ9H7C9 122 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
HDAC6-234ENST00000493923 FRAS1Q86XX4 4008 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 TRAV4A0A0B4J268 109 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 A4D1N5 150 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 C9JAW5 83 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 WT1-ASQ06250 92 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 PMVKQ15126 192 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 ATXN8Q156A1 80 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 C9orf153Q5TBE3 101 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 PATE2Q6UY27 113 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 COX8CQ7Z4L0 72 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 PRNTQ86SH4 94 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 TMEM61Q8N0U2 210 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 C3orf22Q8N5N4 141 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 KIR2DL4Q99706 377 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 PRADC1Q9BSG0 188 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 HIGD1AQ9Y241 93 aa6.03□□□□□ -1.44
HDAC6-234ENST00000493923 IGHV3OR16-8A0A075B7F1 116 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 F8W735 103 aaPredicted RBP6.02□□□□□ -1.45
HDAC6-234ENST00000493923 H3BMM0 161 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 H3BT86 120 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 H3BVH4 76 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 LGALS9O00182 355 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 TCL1BO95988 128 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 EMP1P54849 157 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 MFAP4P55083 255 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 SRSF9Q13242 221 aaKnown RBP eCLIP6.02□□□□□ -1.45
HDAC6-234ENST00000493923 GPHB5Q86YW7 130 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 AMN1Q8IY45 258 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 Q8N3U1 123 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 C10orf126Q8N4M7 172 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 DYNLRB2Q8TF09 96 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 NPIPB3Q92617 1050 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 UBE2WQ96B02 151 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 LINC00526Q96FQ7 95 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 PEMTQ9UBM1 199 aa6.02□□□□□ -1.45
HDAC6-234ENST00000493923 VPS13DQ5THJ4 4388 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 LAGE3Q14657 143 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 MORN5Q5VZ52 161 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 LYZL1Q6UWQ5 148 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 SCGB1D4Q6XE38 83 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 MAPKAPK5-AS1Q8N8E1 139 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 EEF1AKMT3Q96AZ1 226 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 MRPL35Q9NZE8 188 aaKnown RBP6.01□□□□□ -1.45
HDAC6-234ENST00000493923 PRO1854Q9UHT4 67 aa6.01□□□□□ -1.45
HDAC6-234ENST00000493923 DNAH6Q9C0G6 4158 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 TRAV16A0A0A6YYK6 109 aaPredicted RBP6□□□□□ -1.45
HDAC6-234ENST00000493923 TRBV10-2A0A0K0K1G8 114 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 IGLV2-11P01706 119 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 GOLT1AQ6ZVE7 132 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 OVOL2Q9BRP0 275 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 CNFNQ9BYD5 112 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 NDUFA4L2Q9NRX3 87 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 C21orf62Q9NYP8 219 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 AGRNO00468 2067 aa6□□□□□ -1.45
HDAC6-234ENST00000493923 IGKV1D-37A0A075B6S9 117 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 TRAV8-1A0A0A6YYK1 113 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 A0A0B4J2C4 111 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 ZNF815PA8K554 130 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 K7EIM0 57 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 TNFRSF6BO95407 300 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 IGHV3-48P01763 117 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 CXCL5P42830 114 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 TMEM258P61165 79 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 PDE6HQ13956 83 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 ORMDL2Q53FV1 153 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 BAALCQ8WXS3 180 aa5.99□□□□□ -1.45
HDAC6-234ENST00000493923 ODF3Q96PU9 254 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms