RNA–Protein interactions for RNA: ENST00000492545.1

CTDSP1-211, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-211ENST00000492545 LINC01551Q86U37 167 aa15.47■□□□□ 0.07
CTDSP1-211ENST00000492545 GFRA4Q9GZZ7 299 aa15.47■□□□□ 0.07
CTDSP1-211ENST00000492545 SRRM2Q9UQ35 2752 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-211ENST00000492545 UBE2L6O14933 153 aa15.46■□□□□ 0.07
CTDSP1-211ENST00000492545 REG3AQ06141 175 aa15.46■□□□□ 0.07
CTDSP1-211ENST00000492545 A0A1B0GVG6 124 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 USP17L23D6RBM5 183 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 NCR2O95944 276 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 HLA-DQA1P01909 254 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 SRP19P09132 144 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 AMTP48728 403 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 C20orf203Q8NBC4 194 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 TSKUQ8WUA8 353 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 OSTCQ9NRP0 149 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 DNAH8Q96JB1 4490 aa15.45■□□□□ 0.06
CTDSP1-211ENST00000492545 DGAT2L7PQ6IED9 249 aa15.44■□□□□ 0.06
CTDSP1-211ENST00000492545 TRAV26-2A0A0B4J265 109 aa15.43■□□□□ 0.06
CTDSP1-211ENST00000492545 FAM74A3Q4VXF1 159 aa15.43■□□□□ 0.06
CTDSP1-211ENST00000492545 KRTAP26-1Q6PEX3 210 aa15.43■□□□□ 0.06
CTDSP1-211ENST00000492545 CLPSL2Q6UWE3 100 aa15.43■□□□□ 0.06
CTDSP1-211ENST00000492545 CLRN3Q8NCR9 226 aa15.43■□□□□ 0.06
CTDSP1-211ENST00000492545 A0A1B0GUT8 65 aa15.42■□□□□ 0.06
CTDSP1-211ENST00000492545 LINC01620Q4KN68 170 aa15.42■□□□□ 0.06
CTDSP1-211ENST00000492545 IGLV4-60A0A075B6I1 120 aa15.41■□□□□ 0.06
CTDSP1-211ENST00000492545 HIGD1CA8MV81 97 aa15.41■□□□□ 0.06
CTDSP1-211ENST00000492545 VPS13BQ7Z7G8 4022 aa15.4■□□□□ 0.06
CTDSP1-211ENST00000492545 H7C423 109 aa15.4■□□□□ 0.06
CTDSP1-211ENST00000492545 CHAC1Q9BUX1 264 aa15.4■□□□□ 0.06
CTDSP1-211ENST00000492545 TRBV6-5A0A0K0K1A5 114 aa15.39■□□□□ 0.05
CTDSP1-211ENST00000492545 PLA2G1BP04054 148 aaKnown RBP15.39■□□□□ 0.05
CTDSP1-211ENST00000492545 TMEM241Q24JQ0 296 aa15.39■□□□□ 0.05
CTDSP1-211ENST00000492545 RPL39LQ96EH5 51 aaKnown RBP15.39■□□□□ 0.05
CTDSP1-211ENST00000492545 TMEM191AQ9H0A3 160 aa15.39■□□□□ 0.05
CTDSP1-211ENST00000492545 SDHAF1A6NFY7 115 aa15.38■□□□□ 0.05
CTDSP1-211ENST00000492545 PRSS1P07477 247 aa15.38■□□□□ 0.05
CTDSP1-211ENST00000492545 SMDT1Q9H4I9 107 aa15.38■□□□□ 0.05
CTDSP1-211ENST00000492545 IGLV10-54A0A075B6I4 117 aa15.37■□□□□ 0.05
CTDSP1-211ENST00000492545 SCXQ7RTU7 201 aa15.37■□□□□ 0.05
CTDSP1-211ENST00000492545 DEFB104AQ8WTQ1 72 aa15.37■□□□□ 0.05
CTDSP1-211ENST00000492545 I3L3M4 83 aa15.36■□□□□ 0.05
CTDSP1-211ENST00000492545 APCSP02743 223 aa15.36■□□□□ 0.05
CTDSP1-211ENST00000492545 PEA15Q15121 130 aa15.36■□□□□ 0.05
CTDSP1-211ENST00000492545 AMMECR1LQ6DCA0 310 aa15.36■□□□□ 0.05
CTDSP1-211ENST00000492545 RIGQ13278 110 aa15.35■□□□□ 0.05
CTDSP1-211ENST00000492545 LINC00528Q8N1L1 170 aa15.35■□□□□ 0.05
CTDSP1-211ENST00000492545 C9orf163Q8N9P6 203 aa15.35■□□□□ 0.05
CTDSP1-211ENST00000492545 ISOC2Q96AB3 205 aa15.35■□□□□ 0.05
CTDSP1-211ENST00000492545 V9GYV3 84 aa15.35■□□□□ 0.05
CTDSP1-211ENST00000492545 PMCHP20382 165 aa15.34■□□□□ 0.05
CTDSP1-211ENST00000492545 MRAP2Q96G30 205 aa15.34■□□□□ 0.05
CTDSP1-211ENST00000492545 ST20Q9HBF5 79 aa15.34■□□□□ 0.05
CTDSP1-211ENST00000492545 DMBT1Q9UGM3 2413 aaPredicted RBP15.33■□□□□ 0.04
CTDSP1-211ENST00000492545 NAT8Q9UHE5 227 aa15.33■□□□□ 0.04
CTDSP1-211ENST00000492545 FLG2Q5D862 2391 aaPredicted RBP15.33■□□□□ 0.04
CTDSP1-211ENST00000492545 ZNF25P17030 456 aaPredicted RBP15.32■□□□□ 0.04
CTDSP1-211ENST00000492545 RAB4AP20338 218 aa15.32■□□□□ 0.04
CTDSP1-211ENST00000492545 RPL23P62829 140 aaKnown RBP15.32■□□□□ 0.04
CTDSP1-211ENST00000492545 NUP35Q8NFH5 326 aa15.32■□□□□ 0.04
CTDSP1-211ENST00000492545 CIRBP-AS1Q8TBR5 109 aa15.32■□□□□ 0.04
CTDSP1-211ENST00000492545 NAT8BQ9UHF3 227 aa15.32■□□□□ 0.04
CTDSP1-211ENST00000492545 PPP1R17O96001 155 aa15.31■□□□□ 0.04
CTDSP1-211ENST00000492545 CNBPP62633 177 aaKnown RBP15.31■□□□□ 0.04
CTDSP1-211ENST00000492545 RNF185Q96GF1 192 aa15.31■□□□□ 0.04
CTDSP1-211ENST00000492545 FGF6P10767 208 aa15.3■□□□□ 0.04
CTDSP1-211ENST00000492545 RNASEKQ6P5S7 137 aaKnown RBP15.3■□□□□ 0.04
CTDSP1-211ENST00000492545 CFAP161Q6P656 301 aa15.3■□□□□ 0.04
CTDSP1-211ENST00000492545 AP5S1Q9NUS5 200 aa15.3■□□□□ 0.04
CTDSP1-211ENST00000492545 TRBV27A0A0K0K1C4 114 aa15.29■□□□□ 0.04
CTDSP1-211ENST00000492545 hDV102S1A0JD36 115 aa15.29■□□□□ 0.04
CTDSP1-211ENST00000492545 C9JQL5 133 aa15.29■□□□□ 0.04
CTDSP1-211ENST00000492545 ADIRFQ15847 76 aa15.29■□□□□ 0.04
CTDSP1-211ENST00000492545 BTF3L4Q96K17 158 aa15.29■□□□□ 0.04
CTDSP1-211ENST00000492545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-211ENST00000492545 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-211ENST00000492545 IGKV2-29A2NJV5 120 aaPredicted RBP15.28■□□□□ 0.04
CTDSP1-211ENST00000492545 ESDP10768 282 aa15.28■□□□□ 0.04
CTDSP1-211ENST00000492545 POLR2KP53803 58 aaKnown RBP15.28■□□□□ 0.04
CTDSP1-211ENST00000492545 AMN1Q8IY45 258 aa15.28■□□□□ 0.04
CTDSP1-211ENST00000492545 TMEM101Q96IK0 257 aa15.28■□□□□ 0.04
CTDSP1-211ENST00000492545 MYCBP2O75592 4640 aa15.26■□□□□ 0.03
CTDSP1-211ENST00000492545 A0A1B0GW15 77 aa15.26■□□□□ 0.03
CTDSP1-211ENST00000492545 SMIM27A0A1W2PRY6 76 aa15.26■□□□□ 0.03
CTDSP1-211ENST00000492545 VCYO14598 125 aa15.26■□□□□ 0.03
CTDSP1-211ENST00000492545 GAS8-AS1O95177 125 aa15.26■□□□□ 0.03
CTDSP1-211ENST00000492545 TSHBP01222 138 aa15.26■□□□□ 0.03
CTDSP1-211ENST00000492545 SDIM1Q6ZPB5 146 aa15.26■□□□□ 0.03
CTDSP1-211ENST00000492545 GAGE12HA6NDE8 117 aa15.25■□□□□ 0.03
CTDSP1-211ENST00000492545 IGKV3OR2-268A0A0C4DH90 116 aa15.24■□□□□ 0.03
CTDSP1-211ENST00000492545 RPS10P46783 165 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-211ENST00000492545 SRSF3P84103 164 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-211ENST00000492545 MRPL52Q86TS9 123 aaKnown RBP15.24■□□□□ 0.03
CTDSP1-211ENST00000492545 OR5A1Q8NGJ0 315 aa15.24■□□□□ 0.03
CTDSP1-211ENST00000492545 CHCHD10Q8WYQ3 142 aaPredicted RBP15.24■□□□□ 0.03
CTDSP1-211ENST00000492545 TMEM242Q9NWH2 141 aa15.24■□□□□ 0.03
CTDSP1-211ENST00000492545 HERC1Q15751 4861 aa15.22■□□□□ 0.03
CTDSP1-211ENST00000492545 IGHV3-64A0A075B6Q5 118 aa15.22■□□□□ 0.03
CTDSP1-211ENST00000492545 PPP1R2P9O14990 202 aa15.22■□□□□ 0.03
CTDSP1-211ENST00000492545 SMAGPQ0VAQ4 97 aa15.22■□□□□ 0.03
CTDSP1-211ENST00000492545 C7orf77A4D0Y5 90 aa15.21■□□□□ 0.03
CTDSP1-211ENST00000492545 LINC00862A6NCI5 91 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms