RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CNFNQ9BYD5 112 aa5.68□□□□□ -1.5
NUP50-217ENST00000491860 RAB19A4D1S5 217 aa5.67□□□□□ -1.5
NUP50-217ENST00000491860 H7C423 109 aa5.67□□□□□ -1.5
NUP50-217ENST00000491860 NCR2O95944 276 aa5.67□□□□□ -1.5
NUP50-217ENST00000491860 PRSS1P07477 247 aa5.67□□□□□ -1.5
NUP50-217ENST00000491860 RPL37AP61513 92 aaKnown RBP5.67□□□□□ -1.5
NUP50-217ENST00000491860 TWIST1Q15672 202 aa5.67□□□□□ -1.5
NUP50-217ENST00000491860 RNF185Q96GF1 192 aa5.67□□□□□ -1.5
NUP50-217ENST00000491860 RPP21Q9H633 154 aaKnown RBP5.67□□□□□ -1.5
NUP50-217ENST00000491860 TMEM250H0YL14 139 aa5.66□□□□□ -1.5
NUP50-217ENST00000491860 AMTP48728 403 aa5.66□□□□□ -1.5
NUP50-217ENST00000491860 CLPSL2Q6UWE3 100 aa5.66□□□□□ -1.5
NUP50-217ENST00000491860 C20orf203Q8NBC4 194 aa5.66□□□□□ -1.5
NUP50-217ENST00000491860 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
NUP50-217ENST00000491860 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
NUP50-217ENST00000491860 PKIGQ9Y2B9 76 aa5.66□□□□□ -1.5
NUP50-217ENST00000491860 TRBV20OR9-2A0A075B6H5 130 aa5.65□□□□□ -1.5
NUP50-217ENST00000491860 IGHV3-64A0A075B6Q5 118 aa5.65□□□□□ -1.5
NUP50-217ENST00000491860 hDV102S1A0JD36 115 aa5.65□□□□□ -1.5
NUP50-217ENST00000491860 BLOC1S1P78537 153 aa5.65□□□□□ -1.5
NUP50-217ENST00000491860 AMMECR1LQ6DCA0 310 aa5.65□□□□□ -1.5
NUP50-217ENST00000491860 KRTAP26-1Q6PEX3 210 aa5.65□□□□□ -1.5
NUP50-217ENST00000491860 BORCS7Q96B45 105 aa5.65□□□□□ -1.5
NUP50-217ENST00000491860 IGLV10-54A0A075B6I4 117 aa5.64□□□□□ -1.51
NUP50-217ENST00000491860 A8MWL6 223 aa5.64□□□□□ -1.51
NUP50-217ENST00000491860 NDUFS6O75380 124 aaKnown RBP5.64□□□□□ -1.51
NUP50-217ENST00000491860 APCSP02743 223 aa5.64□□□□□ -1.51
NUP50-217ENST00000491860 ZNF25P17030 456 aaPredicted RBP5.64□□□□□ -1.51
NUP50-217ENST00000491860 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
NUP50-217ENST00000491860 CT83Q5H943 113 aa5.64□□□□□ -1.51
NUP50-217ENST00000491860 SDIM1Q6ZPB5 146 aa5.64□□□□□ -1.51
NUP50-217ENST00000491860 FAM231DQ6ZW35 169 aa5.64□□□□□ -1.51
NUP50-217ENST00000491860 IGLV4-60A0A075B6I1 120 aa5.63□□□□□ -1.51
NUP50-217ENST00000491860 GATCO43716 136 aaKnown RBP5.63□□□□□ -1.51
NUP50-217ENST00000491860 CIRBPQ14011 172 aaKnown RBP5.63□□□□□ -1.51
NUP50-217ENST00000491860 OCC1Q8TAD7 63 aa5.63□□□□□ -1.51
NUP50-217ENST00000491860 DPH3Q96FX2 82 aa5.63□□□□□ -1.51
NUP50-217ENST00000491860 TMEM101Q96IK0 257 aa5.63□□□□□ -1.51
NUP50-217ENST00000491860 RNASE7Q9H1E1 156 aaKnown RBP5.63□□□□□ -1.51
NUP50-217ENST00000491860 PLA2G2DQ9UNK4 145 aa5.63□□□□□ -1.51
NUP50-217ENST00000491860 LRP1Q07954 4544 aaKnown RBP5.63□□□□□ -1.51
NUP50-217ENST00000491860 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
NUP50-217ENST00000491860 FAM231BA6NCW3 169 aa5.62□□□□□ -1.51
NUP50-217ENST00000491860 FOXA3P55318 350 aaPredicted RBP5.62□□□□□ -1.51
NUP50-217ENST00000491860 SMAGPQ0VAQ4 97 aa5.62□□□□□ -1.51
NUP50-217ENST00000491860 AKAP14Q86UN6 197 aa5.62□□□□□ -1.51
NUP50-217ENST00000491860 GATD1Q8NB37 220 aa5.62□□□□□ -1.51
NUP50-217ENST00000491860 BTF3L4Q96K17 158 aa5.62□□□□□ -1.51
NUP50-217ENST00000491860 PKHD1L1Q86WI1 4243 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 TRBV6-5A0A0K0K1A5 114 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 SDHAF1A6NFY7 115 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 I3L3M4 83 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 K7EN84 100 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 PPP1R17O96001 155 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 PMCHP20382 165 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 RPS10P46783 165 aaKnown RBP5.61□□□□□ -1.51
NUP50-217ENST00000491860 RNASEKQ6P5S7 137 aaKnown RBP5.61□□□□□ -1.51
NUP50-217ENST00000491860 Q6ZRU5 148 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 C7orf33Q8WU49 177 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 GFRA4Q9GZZ7 299 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 LINC00474Q9P2X8 69 aa5.61□□□□□ -1.51
NUP50-217ENST00000491860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.61□□□□□ -1.51
NUP50-217ENST00000491860 GAGE12HA6NDE8 117 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 FGF6P10767 208 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 OR5A1Q8NGJ0 315 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 LYPD6BQ8NI32 183 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 SPACA4Q8TDM5 124 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 CHCHD10Q8WYQ3 142 aaPredicted RBP5.6□□□□□ -1.51
NUP50-217ENST00000491860 MRAP2Q96G30 205 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 ST20Q9HBF5 79 aa5.6□□□□□ -1.51
NUP50-217ENST00000491860 TRAV26-2A0A0B4J265 109 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 A0A1B0GUT8 65 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 CCL25O15444 150 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 Q6ZNX1 250 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 TSKUQ8WUA8 353 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
NUP50-217ENST00000491860 SMIM7Q9BQ49 75 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 EIF5A2Q9GZV4 153 aaKnown RBP5.59□□□□□ -1.51
NUP50-217ENST00000491860 TMEM191AQ9H0A3 160 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 PLAC8Q9NZF1 115 aa5.59□□□□□ -1.51
NUP50-217ENST00000491860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.58□□□□□ -1.52
NUP50-217ENST00000491860 A0A087WYN8 130 aa5.58□□□□□ -1.52
NUP50-217ENST00000491860 GVQW2A0A096LPI5 108 aaPredicted RBP5.58□□□□□ -1.52
NUP50-217ENST00000491860 IGKV3OR2-268A0A0C4DH90 116 aa5.58□□□□□ -1.52
NUP50-217ENST00000491860 IGKV2-29A2NJV5 120 aaPredicted RBP5.58□□□□□ -1.52
NUP50-217ENST00000491860 SS18Q15532 418 aa5.58□□□□□ -1.52
NUP50-217ENST00000491860 ALKAL2Q6UX46 152 aa5.58□□□□□ -1.52
NUP50-217ENST00000491860 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
NUP50-217ENST00000491860 OSTCQ9NRP0 149 aa5.58□□□□□ -1.52
NUP50-217ENST00000491860 IGHV1-58A0A0C4DH39 117 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 TRBV27A0A0K0K1C4 114 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 ZNF727A8MUV8 499 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 HIGD1CA8MV81 97 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 PPP1R2P9O14990 202 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 TCAPO15273 167 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 ESDP10768 282 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 CEBPGP53567 150 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 RIGQ13278 110 aa5.57□□□□□ -1.52
NUP50-217ENST00000491860 FAM74A3Q4VXF1 159 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms