RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CTRLP40313 264 aa7.05□□□□□ -1.28
TTC28-207ENST00000490475 AMTP48728 403 aa7.05□□□□□ -1.28
TTC28-207ENST00000490475 Q6ZSN1 163 aa7.05□□□□□ -1.28
TTC28-207ENST00000490475 CHCHD1Q96BP2 118 aaKnown RBP7.05□□□□□ -1.28
TTC28-207ENST00000490475 DAZAP1Q96EP5 407 aaKnown RBP7.05□□□□□ -1.28
TTC28-207ENST00000490475 PHLDA3Q9Y5J5 127 aa7.05□□□□□ -1.28
TTC28-207ENST00000490475 A0A1B0GW15 77 aa7.04□□□□□ -1.28
TTC28-207ENST00000490475 C19orf71A6NCJ1 209 aa7.04□□□□□ -1.28
TTC28-207ENST00000490475 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
TTC28-207ENST00000490475 M0R381 172 aa7.04□□□□□ -1.28
TTC28-207ENST00000490475 OR5AL1P0C617 328 aa7.04□□□□□ -1.28
TTC28-207ENST00000490475 SLC25A29Q8N8R3 303 aa7.04□□□□□ -1.28
TTC28-207ENST00000490475 A0A087WTM6 91 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 A0A1B0GXF2 115 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 A8MWV9 139 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 DLEU1O43261 78 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 PIK3CD-AS1Q5SR53 167 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 UFSP1Q6NVU6 142 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 Q8N976 141 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 SYT8Q8NBV8 401 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 NUDT10Q8NFP7 164 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 OR2D3Q8NGH3 330 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 OR10AG1Q8NH19 301 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 NUDT11Q96G61 164 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 PRADC1Q9BSG0 188 aa7.03□□□□□ -1.28
TTC28-207ENST00000490475 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
TTC28-207ENST00000490475 RNASE7Q9H1E1 156 aaKnown RBP7.03□□□□□ -1.28
TTC28-207ENST00000490475 ABCA13Q86UQ4 5058 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 A0A087WWL8 130 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 IGHV3-38A0A0C4DH36 116 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 A6NJY4 79 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 PSCAO43653 123 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 HSBP1O75506 76 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 P01737 135 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 CRYGDP07320 174 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 IGLC3P0DOY3 106 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
TTC28-207ENST00000490475 KRTDAPP60985 99 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 HBBP68871 147 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 RHOHQ15669 191 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 ZFP2Q6ZN57 461 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
TTC28-207ENST00000490475 ALKBH7Q9BT30 221 aaPredicted RBP7.02□□□□□ -1.29
TTC28-207ENST00000490475 Q9UF83 564 aa7.02□□□□□ -1.29
TTC28-207ENST00000490475 TRBV6-4A0A1B0GX49 114 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 SNAI2O43623 268 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 LINC01556Q5JQF7 62 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 FAM74A4Q5TZK3 123 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 NIT1Q86X76 327 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 WFDC10BQ8IUB3 73 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 C14orf178Q8N769 122 aaPredicted RBP7.01□□□□□ -1.29
TTC28-207ENST00000490475 GATD1Q8NB37 220 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 NUP35Q8NFH5 326 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 TPPP3Q9BW30 176 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 RPP21Q9H633 154 aaKnown RBP7.01□□□□□ -1.29
TTC28-207ENST00000490475 PAM16Q9Y3D7 125 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 HSPG2P98160 4391 aa7.01□□□□□ -1.29
TTC28-207ENST00000490475 C3orf79P0CE67 100 aa7□□□□□ -1.29
TTC28-207ENST00000490475 IGLC6P0CF74 106 aa7□□□□□ -1.29
TTC28-207ENST00000490475 RPS20P60866 119 aaKnown RBP7□□□□□ -1.29
TTC28-207ENST00000490475 SPATA45Q537H7 98 aa7□□□□□ -1.29
TTC28-207ENST00000490475 SPANXN1Q5VSR9 72 aa7□□□□□ -1.29
TTC28-207ENST00000490475 ORAOV1Q8WV07 137 aa7□□□□□ -1.29
TTC28-207ENST00000490475 ST20Q9HBF5 79 aa7□□□□□ -1.29
TTC28-207ENST00000490475 LRP1BQ9NZR2 4599 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 HIGD1CA8MV81 97 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 ZNF25P17030 456 aaPredicted RBP6.99□□□□□ -1.29
TTC28-207ENST00000490475 GCSHP23434 173 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 HNRNPA3P51991 378 aaKnown RBP6.99□□□□□ -1.29
TTC28-207ENST00000490475 LAGE3Q14657 143 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 MRPL54Q6P161 138 aaKnown RBP6.99□□□□□ -1.29
TTC28-207ENST00000490475 LYZL1Q6UWQ5 148 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 FER1L6-AS1Q8NA97 138 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 TM2D2Q9BX73 214 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 LAMTOR2Q9Y2Q5 125 aa6.99□□□□□ -1.29
TTC28-207ENST00000490475 GAGE12JA6NER3 117 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 IBA57-AS1B1ANH7 110 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 GAGE4Q13068 117 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 GAGE5Q13069 117 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 GAGE13Q4V321 117 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 LELP1Q5T871 98 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 TMEM70Q9BUB7 260 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 TNFRSF18Q9Y5U5 241 aa6.98□□□□□ -1.29
TTC28-207ENST00000490475 F2Z2F3 143 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 RHODO00212 210 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 Q6ZN92 141 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 ATP6V0E2Q8NHE4 81 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 PMCHL2Q9BQD1 86 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 TMEM191AQ9H0A3 160 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 GTSF1LQ9H1H1 148 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 HSPB8Q9UJY1 196 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 COX11Q9Y6N1 276 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 KIF25-AS1Q9Y6Z4 181 aa6.97□□□□□ -1.29
TTC28-207ENST00000490475 DMBT1Q9UGM3 2413 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 1019.8 ms