RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	TIMM17A	Q99595	171 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	MAP6D1	Q9H9H5	199 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	TRAV2	A0A0B4J234	112 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	FSHB	P01225	129 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	PSMB2	P49721	201 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	TAL2	Q16559	108 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	TMEM141	Q96I45	108 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	RAX2	Q96IS3	184 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	TRBV6-5	A0A0K0K1A5	114 aa		11.47	□□□□□ -0.57
BRD9-208	ENST00000489816	IGLV4-3	A0A075B6K6	122 aa		11.46	□□□□□ -0.57
BRD9-208	ENST00000489816	ODF3	Q96PU9	254 aa		11.46	□□□□□ -0.57
BRD9-208	ENST00000489816	TMEM89	A2RUT3	159 aa		11.46	□□□□□ -0.58
BRD9-208	ENST00000489816	PTH2	Q96A98	100 aa		11.45	□□□□□ -0.58
BRD9-208	ENST00000489816		Q6ZSV7	163 aa		11.45	□□□□□ -0.58
BRD9-208	ENST00000489816	GAGE13	Q4V321	117 aa		11.44	□□□□□ -0.58
BRD9-208	ENST00000489816	WFDC10A	Q9H1F0	79 aa		11.44	□□□□□ -0.58
BRD9-208	ENST00000489816	PRSS2	P07478	247 aa		11.44	□□□□□ -0.58
BRD9-208	ENST00000489816		A0A1B0GWB2	263 aa		11.44	□□□□□ -0.58
BRD9-208	ENST00000489816	TSPAN13	O95857	204 aa		11.44	□□□□□ -0.58
BRD9-208	ENST00000489816	ZNF22	P17026	224 aa	Predicted RBP	11.44	□□□□□ -0.58
BRD9-208	ENST00000489816	DEFB114	Q30KQ6	69 aa		11.44	□□□□□ -0.58
BRD9-208	ENST00000489816	PEMT	Q9UBM1	199 aa		11.43	□□□□□ -0.58
BRD9-208	ENST00000489816	UNC79	Q9P2D8	2635 aa		11.43	□□□□□ -0.58
BRD9-208	ENST00000489816	RPL32	P62910	135 aa	Known RBP	11.43	□□□□□ -0.58
BRD9-208	ENST00000489816	VWF	P04275	2813 aa		11.43	□□□□□ -0.58
BRD9-208	ENST00000489816	PAPPA-AS1	Q5QFB9	102 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	ESM1	Q9NQ30	184 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816		M0R2P5	195 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	GTSF1L	Q9H1H1	148 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	RHOD	O00212	210 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	CFC1B	P0CG36	223 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	CFC1	P0CG37	223 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	NSUN5P1	Q3KNT7	163 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	CFAP126	Q5VTH2	177 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816	AMELX	Q99217	191 aa		11.42	□□□□□ -0.58
BRD9-208	ENST00000489816		A0A0U1RRA0	63 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816	SCGB1C2	P0DMR2	95 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816	PLA2G2A	P14555	144 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816	KRTAP1-3	Q8IUG1	177 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816	TRGV1	A0A0A0MS02	117 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816		A4D1N5	150 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816	DNAJC9-AS1	A6NH13	148 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816	NDUFA11	Q86Y39	141 aa		11.41	□□□□□ -0.58
BRD9-208	ENST00000489816	TMEM238L	A0A1B0GVL6	79 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816		A6NJY4	79 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	NDUFA7	O95182	113 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	IGHV3-30	P01768	117 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	SPINK8	P0C7L1	97 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	IGHV3-30-5	P0DP03	117 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	RHOH	Q15669	191 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	ODF3L2	Q3SX64	289 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	C4orf3	Q8WVX3	66 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	CITED2	Q99967	270 aa	Predicted RBP	11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	SPANXB1	Q9NS25	103 aa	Predicted RBP	11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	TMEM223	A0PJW6	202 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	SLC25A29	Q8N8R3	303 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	FAM104A	Q969W3	186 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	LINC00467	Q9BRT7	94 aa		11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.4	□□□□□ -0.58
BRD9-208	ENST00000489816	C10orf126	Q8N4M7	172 aa		11.4	□□□□□ -0.59
BRD9-208	ENST00000489816	RNF152	Q8N8N0	203 aa		11.4	□□□□□ -0.59
BRD9-208	ENST00000489816	UBE2D1	P51668	147 aa		11.39	□□□□□ -0.59
BRD9-208	ENST00000489816	ZNF415	Q09FC8	603 aa		11.39	□□□□□ -0.59
BRD9-208	ENST00000489816	STH	Q8IWL8	128 aa		11.39	□□□□□ -0.59
BRD9-208	ENST00000489816	DAND5	Q8N907	189 aa		11.39	□□□□□ -0.59
BRD9-208	ENST00000489816	PDZD2	O15018	2839 aa		11.39	□□□□□ -0.59
BRD9-208	ENST00000489816		Q6ZUT4	128 aa		11.39	□□□□□ -0.59
BRD9-208	ENST00000489816	MUSTN1	Q8IVN3	82 aa		11.39	□□□□□ -0.59
BRD9-208	ENST00000489816	ZNF625	Q96I27	306 aa	Predicted RBP	11.38	□□□□□ -0.59
BRD9-208	ENST00000489816		F8W1H4	67 aa		11.38	□□□□□ -0.59
BRD9-208	ENST00000489816	IGHV3-30-3	P0DP02	117 aa		11.38	□□□□□ -0.59
BRD9-208	ENST00000489816	RPL35A	P18077	110 aa	Known RBP	11.38	□□□□□ -0.59
BRD9-208	ENST00000489816	COTL1	Q14019	142 aa		11.38	□□□□□ -0.59
BRD9-208	ENST00000489816		A8MWV9	139 aa		11.37	□□□□□ -0.59
BRD9-208	ENST00000489816	CCL24	O00175	119 aa		11.37	□□□□□ -0.59
BRD9-208	ENST00000489816	NFE4	Q86UQ8	179 aa		11.37	□□□□□ -0.59
BRD9-208	ENST00000489816	C11orf72	Q8NBR9	251 aa		11.37	□□□□□ -0.59
BRD9-208	ENST00000489816	INS	P01308	110 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	SMCP	P49901	116 aa	Predicted RBP	11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	SMAGP	Q0VAQ4	97 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816		Q1RN00	199 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	DGAT2L7P	Q6IED9	249 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816		Q6ZTI0	123 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	TIMM21	Q9BVV7	248 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	EIF4EBP3	O60516	100 aa	Predicted RBP	11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	TCL1B	O95988	128 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	PRO0461	Q9UI25	63 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	CHCHD7	Q9BUK0	85 aa		11.36	□□□□□ -0.59
BRD9-208	ENST00000489816	LEPROT	O15243	131 aa		11.35	□□□□□ -0.59
BRD9-208	ENST00000489816	C1orf158	Q8N1D5	194 aa		11.35	□□□□□ -0.59
BRD9-208	ENST00000489816	YAE1D1	Q9NRH1	226 aa		11.35	□□□□□ -0.59
BRD9-208	ENST00000489816	ADAMTSL4-AS1	Q5T5F5	129 aa		11.34	□□□□□ -0.59
BRD9-208	ENST00000489816		Q8N2B8	174 aa		11.34	□□□□□ -0.59
BRD9-208	ENST00000489816	PRO1854	Q9UHT4	67 aa		11.34	□□□□□ -0.59
BRD9-208	ENST00000489816		A0A0J9YXY3	114 aa		11.34	□□□□□ -0.59
BRD9-208	ENST00000489816	LINC00694	P0DN24	101 aa		11.34	□□□□□ -0.59
BRD9-208	ENST00000489816	SMR3A	Q99954	134 aa		11.34	□□□□□ -0.59
BRD9-208	ENST00000489816	NOP10	Q9NPE3	64 aa	Known RBP	11.34	□□□□□ -0.59
BRD9-208	ENST00000489816	GEMIN7	Q9H840	131 aa	Known RBP	11.33	□□□□□ -0.6
BRD9-208	ENST00000489816	CDKN2A-AS1	Q9UH64	79 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms