RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TIMM17AQ99595 171 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 MAP6D1Q9H9H5 199 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 TRAV2A0A0B4J234 112 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 FSHBP01225 129 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 PSMB2P49721 201 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 TAL2Q16559 108 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 TMEM141Q96I45 108 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 RAX2Q96IS3 184 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 TRBV6-5A0A0K0K1A5 114 aa11.47□□□□□ -0.57
BRD9-208ENST00000489816 IGLV4-3A0A075B6K6 122 aa11.46□□□□□ -0.57
BRD9-208ENST00000489816 ODF3Q96PU9 254 aa11.46□□□□□ -0.57
BRD9-208ENST00000489816 TMEM89A2RUT3 159 aa11.46□□□□□ -0.58
BRD9-208ENST00000489816 PTH2Q96A98 100 aa11.45□□□□□ -0.58
BRD9-208ENST00000489816 Q6ZSV7 163 aa11.45□□□□□ -0.58
BRD9-208ENST00000489816 GAGE13Q4V321 117 aa11.44□□□□□ -0.58
BRD9-208ENST00000489816 WFDC10AQ9H1F0 79 aa11.44□□□□□ -0.58
BRD9-208ENST00000489816 PRSS2P07478 247 aa11.44□□□□□ -0.58
BRD9-208ENST00000489816 A0A1B0GWB2 263 aa11.44□□□□□ -0.58
BRD9-208ENST00000489816 TSPAN13O95857 204 aa11.44□□□□□ -0.58
BRD9-208ENST00000489816 ZNF22P17026 224 aaPredicted RBP11.44□□□□□ -0.58
BRD9-208ENST00000489816 DEFB114Q30KQ6 69 aa11.44□□□□□ -0.58
BRD9-208ENST00000489816 PEMTQ9UBM1 199 aa11.43□□□□□ -0.58
BRD9-208ENST00000489816 UNC79Q9P2D8 2635 aa11.43□□□□□ -0.58
BRD9-208ENST00000489816 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
BRD9-208ENST00000489816 VWFP04275 2813 aa11.43□□□□□ -0.58
BRD9-208ENST00000489816 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 ESM1Q9NQ30 184 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 M0R2P5 195 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 GTSF1LQ9H1H1 148 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 RHODO00212 210 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 CFC1P0CG37 223 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 NSUN5P1Q3KNT7 163 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 CFAP126Q5VTH2 177 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 AMELXQ99217 191 aa11.42□□□□□ -0.58
BRD9-208ENST00000489816 A0A0U1RRA0 63 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 PLA2G2AP14555 144 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 KRTAP1-3Q8IUG1 177 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 TRGV1A0A0A0MS02 117 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 A4D1N5 150 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 DNAJC9-AS1A6NH13 148 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
BRD9-208ENST00000489816 TMEM238LA0A1B0GVL6 79 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 A6NJY4 79 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 NDUFA7O95182 113 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 SPINK8P0C7L1 97 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 RHOHQ15669 191 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 ODF3L2Q3SX64 289 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 C4orf3Q8WVX3 66 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 CITED2Q99967 270 aaPredicted RBP11.4□□□□□ -0.58
BRD9-208ENST00000489816 SPANXB1Q9NS25 103 aaPredicted RBP11.4□□□□□ -0.58
BRD9-208ENST00000489816 TMEM223A0PJW6 202 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 LINC00467Q9BRT7 94 aa11.4□□□□□ -0.58
BRD9-208ENST00000489816 TSSC4Q9Y5U2 329 aaPredicted RBP11.4□□□□□ -0.58
BRD9-208ENST00000489816 C10orf126Q8N4M7 172 aa11.4□□□□□ -0.59
BRD9-208ENST00000489816 RNF152Q8N8N0 203 aa11.4□□□□□ -0.59
BRD9-208ENST00000489816 UBE2D1P51668 147 aa11.39□□□□□ -0.59
BRD9-208ENST00000489816 ZNF415Q09FC8 603 aa11.39□□□□□ -0.59
BRD9-208ENST00000489816 STHQ8IWL8 128 aa11.39□□□□□ -0.59
BRD9-208ENST00000489816 DAND5Q8N907 189 aa11.39□□□□□ -0.59
BRD9-208ENST00000489816 PDZD2O15018 2839 aa11.39□□□□□ -0.59
BRD9-208ENST00000489816 Q6ZUT4 128 aa11.39□□□□□ -0.59
BRD9-208ENST00000489816 MUSTN1Q8IVN3 82 aa11.39□□□□□ -0.59
BRD9-208ENST00000489816 ZNF625Q96I27 306 aaPredicted RBP11.38□□□□□ -0.59
BRD9-208ENST00000489816 F8W1H4 67 aa11.38□□□□□ -0.59
BRD9-208ENST00000489816 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
BRD9-208ENST00000489816 RPL35AP18077 110 aaKnown RBP11.38□□□□□ -0.59
BRD9-208ENST00000489816 COTL1Q14019 142 aa11.38□□□□□ -0.59
BRD9-208ENST00000489816 A8MWV9 139 aa11.37□□□□□ -0.59
BRD9-208ENST00000489816 CCL24O00175 119 aa11.37□□□□□ -0.59
BRD9-208ENST00000489816 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
BRD9-208ENST00000489816 C11orf72Q8NBR9 251 aa11.37□□□□□ -0.59
BRD9-208ENST00000489816 INSP01308 110 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 SMCPP49901 116 aaPredicted RBP11.36□□□□□ -0.59
BRD9-208ENST00000489816 SMAGPQ0VAQ4 97 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 Q1RN00 199 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 Q6ZTI0 123 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 TIMM21Q9BVV7 248 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 EIF4EBP3O60516 100 aaPredicted RBP11.36□□□□□ -0.59
BRD9-208ENST00000489816 TCL1BO95988 128 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 PRO0461Q9UI25 63 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 CHCHD7Q9BUK0 85 aa11.36□□□□□ -0.59
BRD9-208ENST00000489816 LEPROTO15243 131 aa11.35□□□□□ -0.59
BRD9-208ENST00000489816 C1orf158Q8N1D5 194 aa11.35□□□□□ -0.59
BRD9-208ENST00000489816 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
BRD9-208ENST00000489816 ADAMTSL4-AS1Q5T5F5 129 aa11.34□□□□□ -0.59
BRD9-208ENST00000489816 Q8N2B8 174 aa11.34□□□□□ -0.59
BRD9-208ENST00000489816 PRO1854Q9UHT4 67 aa11.34□□□□□ -0.59
BRD9-208ENST00000489816 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
BRD9-208ENST00000489816 LINC00694P0DN24 101 aa11.34□□□□□ -0.59
BRD9-208ENST00000489816 SMR3AQ99954 134 aa11.34□□□□□ -0.59
BRD9-208ENST00000489816 NOP10Q9NPE3 64 aaKnown RBP11.34□□□□□ -0.59
BRD9-208ENST00000489816 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
BRD9-208ENST00000489816 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms