RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 LINC00336Q6ZUF6 198 aa9.7□□□□□ -0.86
HLA-F-229ENST00000489502 SVBPQ8N300 66 aa9.7□□□□□ -0.86
HLA-F-229ENST00000489502 Q8N976 141 aa9.7□□□□□ -0.86
HLA-F-229ENST00000489502 SNAPINO95295 136 aa9.69□□□□□ -0.86
HLA-F-229ENST00000489502 TSHBP01222 138 aa9.69□□□□□ -0.86
HLA-F-229ENST00000489502 NPYP01303 97 aa9.69□□□□□ -0.86
HLA-F-229ENST00000489502 APCSP02743 223 aa9.69□□□□□ -0.86
HLA-F-229ENST00000489502 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
HLA-F-229ENST00000489502 EPPK1P58107 5090 aaKnown RBP9.68□□□□□ -0.86
HLA-F-229ENST00000489502 HECTD4Q9Y4D8 3996 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 TRAV9-1A0A075B6T8 112 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 I3L3M4 83 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 PMCHP20382 165 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 POLR2KP53803 58 aaKnown RBP9.68□□□□□ -0.86
HLA-F-229ENST00000489502 SUMO2P61956 95 aaKnown RBP9.68□□□□□ -0.86
HLA-F-229ENST00000489502 RBX1P62877 108 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 ATRAIDQ6UW56 229 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 TMEM136Q6ZRR5 245 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 CHCHD7Q9BUK0 85 aa9.68□□□□□ -0.86
HLA-F-229ENST00000489502 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.67□□□□□ -0.86
HLA-F-229ENST00000489502 IGKV2-29A2NJV5 120 aaPredicted RBP9.67□□□□□ -0.86
HLA-F-229ENST00000489502 BTF3P20290 206 aaKnown RBP9.67□□□□□ -0.86
HLA-F-229ENST00000489502 LAGE3Q14657 143 aa9.67□□□□□ -0.86
HLA-F-229ENST00000489502 CLPSL2Q6UWE3 100 aa9.67□□□□□ -0.86
HLA-F-229ENST00000489502 ORMDL3Q8N138 153 aa9.67□□□□□ -0.86
HLA-F-229ENST00000489502 TRBV27A0A0K0K1C4 114 aa9.66□□□□□ -0.86
HLA-F-229ENST00000489502 UBE2L6O14933 153 aa9.66□□□□□ -0.86
HLA-F-229ENST00000489502 PPP1R17O96001 155 aa9.66□□□□□ -0.86
HLA-F-229ENST00000489502 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
HLA-F-229ENST00000489502 PKIAP61925 76 aa9.66□□□□□ -0.86
HLA-F-229ENST00000489502 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
HLA-F-229ENST00000489502 UBE2WQ96B02 151 aa9.66□□□□□ -0.86
HLA-F-229ENST00000489502 PRELID3AQ96N28 172 aa9.66□□□□□ -0.86
HLA-F-229ENST00000489502 A0A1B0GVY2 172 aa9.65□□□□□ -0.86
HLA-F-229ENST00000489502 PPBPP02775 128 aa9.65□□□□□ -0.86
HLA-F-229ENST00000489502 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
HLA-F-229ENST00000489502 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 TRBV24-1A0A075B6N3 115 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 TGIF2-C20orf24A0A0A6YYL0 155 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 VCYO14598 125 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 CRPP02741 224 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 FCER1GP30273 86 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 ELOBQ15370 118 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
HLA-F-229ENST00000489502 HLA-DQA1P01909 254 aa9.63□□□□□ -0.87
HLA-F-229ENST00000489502 KIAA1644Q3SXP7 199 aa9.63□□□□□ -0.87
HLA-F-229ENST00000489502 C20orf203Q8NBC4 194 aa9.63□□□□□ -0.87
HLA-F-229ENST00000489502 PKD1P98161 4303 aa9.63□□□□□ -0.87
HLA-F-229ENST00000489502 DNAH11Q96DT5 4516 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 PKHD1P08F94 4074 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 TRAV8-3A0A0A6YYJ7 113 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 PHOX2AO14813 284 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 PSCAO43653 123 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 ESDP10768 282 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 RPL32P62910 135 aaKnown RBP9.62□□□□□ -0.87
HLA-F-229ENST00000489502 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 RNASEKQ6P5S7 137 aaKnown RBP9.62□□□□□ -0.87
HLA-F-229ENST00000489502 ENHOQ6UWT2 76 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 LINC00269Q8N2A0 174 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 KIR2DL4Q99706 377 aa9.62□□□□□ -0.87
HLA-F-229ENST00000489502 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
HLA-F-229ENST00000489502 LOC389332A0A1B0GUA5 103 aa9.61□□□□□ -0.87
HLA-F-229ENST00000489502 FGF6P10767 208 aa9.61□□□□□ -0.87
HLA-F-229ENST00000489502 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
HLA-F-229ENST00000489502 GNB1LQ9BYB4 327 aa9.61□□□□□ -0.87
HLA-F-229ENST00000489502 TCAPO15273 167 aa9.6□□□□□ -0.87
HLA-F-229ENST00000489502 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
HLA-F-229ENST00000489502 LAMTOR2Q9Y2Q5 125 aa9.6□□□□□ -0.87
HLA-F-229ENST00000489502 A0A087WTM6 91 aa9.59□□□□□ -0.87
HLA-F-229ENST00000489502 A0A1B0GUV1 79 aa9.59□□□□□ -0.87
HLA-F-229ENST00000489502 REG3AQ06141 175 aa9.59□□□□□ -0.87
HLA-F-229ENST00000489502 Q0VG73 95 aa9.59□□□□□ -0.87
HLA-F-229ENST00000489502 RMI2Q96E14 147 aa9.59□□□□□ -0.87
HLA-F-229ENST00000489502 TM2D2Q9BX73 214 aa9.59□□□□□ -0.87
HLA-F-229ENST00000489502 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
HLA-F-229ENST00000489502 PRR34Q9NV39 138 aa9.59□□□□□ -0.87
HLA-F-229ENST00000489502 IGLV10-54A0A075B6I4 117 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 H7C423 109 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 LECT2O14960 151 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 MT-ND6P03923 174 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 WFDC2Q14508 124 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 COX19Q49B96 90 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 YPEL4Q96NS1 127 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 C1orf43Q9BWL3 253 aa9.58□□□□□ -0.88
HLA-F-229ENST00000489502 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
HLA-F-229ENST00000489502 FUSP35637 526 aaKnown RBP eCLIP9.57□□□□□ -0.88
HLA-F-229ENST00000489502 KRTAP10-2P60368 255 aa9.57□□□□□ -0.88
HLA-F-229ENST00000489502 RPL39P62891 51 aaKnown RBP9.57□□□□□ -0.88
HLA-F-229ENST00000489502 FABP9Q0Z7S8 132 aa9.57□□□□□ -0.88
HLA-F-229ENST00000489502 MIAQ16674 131 aa9.57□□□□□ -0.88
HLA-F-229ENST00000489502 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
HLA-F-229ENST00000489502 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
HLA-F-229ENST00000489502 LRCOL1A6NCL2 159 aa9.56□□□□□ -0.88
HLA-F-229ENST00000489502 SPATA12Q7Z6I5 190 aa9.56□□□□□ -0.88
HLA-F-229ENST00000489502 MRPL52Q86TS9 123 aaKnown RBP9.56□□□□□ -0.88
HLA-F-229ENST00000489502 TMEM101Q96IK0 257 aa9.56□□□□□ -0.88
HLA-F-229ENST00000489502 BIRC6Q9NR09 4857 aa9.56□□□□□ -0.88
HLA-F-229ENST00000489502 PRSS47A8MTI9 375 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms