RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 DEFB104AQ8WTQ1 72 aa6.04□□□□□ -1.44
HDAC6-232ENST00000489053 SRRM2Q9UQ35 2752 aaKnown RBP6.03□□□□□ -1.44
HDAC6-232ENST00000489053 IGLV10-54A0A075B6I4 117 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 IGKV3OR2-268A0A0C4DH90 116 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 FAM231BA6NCW3 169 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 SMR3BP02814 79 aaPredicted RBP6.03□□□□□ -1.44
HDAC6-232ENST00000489053 PMCHP20382 165 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 RAB14P61106 215 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 REG3AQ06141 175 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 WFDC2Q14508 124 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 Q5VSD8 79 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 RNASEKQ6P5S7 137 aaKnown RBP6.03□□□□□ -1.44
HDAC6-232ENST00000489053 ENHOQ6UWT2 76 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 GATD1Q8NB37 220 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 TMEM101Q96IK0 257 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 BTF3L4Q96K17 158 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 GFRA4Q9GZZ7 299 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 ST20Q9HBF5 79 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 OSTCQ9NRP0 149 aa6.03□□□□□ -1.44
HDAC6-232ENST00000489053 TRAV8-4A0A0B4J246 113 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 SDHAF1A6NFY7 115 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 USP17L23D6RBM5 183 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 NCR2O95944 276 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 PPP1R17O96001 155 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 HAMPP81172 84 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 RPL39LQ96EH5 51 aaKnown RBP6.02□□□□□ -1.45
HDAC6-232ENST00000489053 KRTAP17-1Q9BYP8 105 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 SMDT1Q9H4I9 107 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 AP5S1Q9NUS5 200 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 NAT8Q9UHE5 227 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 NAT8BQ9UHF3 227 aa6.02□□□□□ -1.45
HDAC6-232ENST00000489053 A0A1B0GUV1 79 aa6.01□□□□□ -1.45
HDAC6-232ENST00000489053 I3L3M4 83 aa6.01□□□□□ -1.45
HDAC6-232ENST00000489053 FCER1GP30273 86 aa6.01□□□□□ -1.45
HDAC6-232ENST00000489053 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
HDAC6-232ENST00000489053 XGP55808 180 aa6.01□□□□□ -1.45
HDAC6-232ENST00000489053 MRAP2Q96G30 205 aa6.01□□□□□ -1.45
HDAC6-232ENST00000489053 TMEM191AQ9H0A3 160 aa6.01□□□□□ -1.45
HDAC6-232ENST00000489053 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6□□□□□ -1.45
HDAC6-232ENST00000489053 IGKV2-29A2NJV5 120 aaPredicted RBP6□□□□□ -1.45
HDAC6-232ENST00000489053 PLA2G1BP04054 148 aaKnown RBP6□□□□□ -1.45
HDAC6-232ENST00000489053 S100A8P05109 93 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 INAFM2P0DMQ5 153 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 SMAGPQ0VAQ4 97 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 DGAT2L7PQ6IED9 249 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 CFAP161Q6P656 301 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 CLRN3Q8NCR9 226 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 ISOC2Q96AB3 205 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 PRR34Q9NV39 138 aa6□□□□□ -1.45
HDAC6-232ENST00000489053 FAT1Q14517 4588 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.99□□□□□ -1.45
HDAC6-232ENST00000489053 A0A1B0GW15 77 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 hDV102S1A0JD36 115 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 H7C423 109 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 CAMPP49913 170 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 RPL23P62829 140 aaKnown RBP5.99□□□□□ -1.45
HDAC6-232ENST00000489053 LINC01620Q4KN68 170 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 C20orf203Q8NBC4 194 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 NUP35Q8NFH5 326 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 OR5A1Q8NGJ0 315 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 TMEM242Q9NWH2 141 aa5.99□□□□□ -1.45
HDAC6-232ENST00000489053 IGLV4-60A0A075B6I1 120 aa5.98□□□□□ -1.45
HDAC6-232ENST00000489053 F8W036 122 aa5.98□□□□□ -1.45
HDAC6-232ENST00000489053 FGF6P10767 208 aa5.98□□□□□ -1.45
HDAC6-232ENST00000489053 ZNF25P17030 456 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-232ENST00000489053 AMN1Q8IY45 258 aa5.98□□□□□ -1.45
HDAC6-232ENST00000489053 DPH3Q96FX2 82 aa5.98□□□□□ -1.45
HDAC6-232ENST00000489053 KIR2DL4Q99706 377 aa5.98□□□□□ -1.45
HDAC6-232ENST00000489053 V9GYV3 84 aa5.98□□□□□ -1.45
HDAC6-232ENST00000489053 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
HDAC6-232ENST00000489053 TRBV6-5A0A0K0K1A5 114 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 C7orf77A4D0Y5 90 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 GAGE12HA6NDE8 117 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 VCYO14598 125 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 PPP1R2P9O14990 202 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 PRSS1P07477 247 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 RAB4AP20338 218 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 CKS2P33552 79 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 LINC00528Q8N1L1 170 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 FAM30AQ9NZY2 134 aa5.97□□□□□ -1.45
HDAC6-232ENST00000489053 SMKR1H3BMG3 65 aa5.96□□□□□ -1.46
HDAC6-232ENST00000489053 TMEM18Q96B42 140 aa5.96□□□□□ -1.46
HDAC6-232ENST00000489053 CHAC1Q9BUX1 264 aa5.96□□□□□ -1.46
HDAC6-232ENST00000489053 VPS13BQ7Z7G8 4022 aa5.96□□□□□ -1.46
HDAC6-232ENST00000489053 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 SMIM27A0A1W2PRY6 76 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 TCAPO15273 167 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 TSHBP01222 138 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 XCL1P47992 114 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 SUMO2P61956 95 aaKnown RBP5.95□□□□□ -1.46
HDAC6-232ENST00000489053 HBBP68871 147 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 SRSF3P84103 164 aaKnown RBP5.95□□□□□ -1.46
HDAC6-232ENST00000489053 SS18Q15532 418 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 MRPL54Q6P161 138 aaKnown RBP5.95□□□□□ -1.46
HDAC6-232ENST00000489053 SCXQ7RTU7 201 aa5.95□□□□□ -1.46
HDAC6-232ENST00000489053 CHCHD10Q8WYQ3 142 aaPredicted RBP5.95□□□□□ -1.46
HDAC6-232ENST00000489053 IGHV3-64A0A075B6Q5 118 aa5.94□□□□□ -1.46
HDAC6-232ENST00000489053 TRBV27A0A0K0K1C4 114 aa5.94□□□□□ -1.46
HDAC6-232ENST00000489053 LINC00862A6NCI5 91 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 706.7 ms