RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 NUDT3O95989 172 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BJP06899 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 LINC00614P0C842 121 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BOP23527 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BBP33778 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BDP58876 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BCP62807 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST2H2BEQ16778 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BHQ93079 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BNQ99877 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 HIST1H2BMQ99879 126 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 AP5S1Q9NUS5 200 aa7.69□□□□□ -1.18
HDLBP-242ENST00000488013 TRBV25-1A0A075B6N4 114 aa7.68□□□□□ -1.18
HDLBP-242ENST00000488013 IGHV1-24A0A0C4DH33 117 aa7.68□□□□□ -1.18
HDLBP-242ENST00000488013 LOC100131303A0A0U1RQF7 123 aa7.68□□□□□ -1.18
HDLBP-242ENST00000488013 LINC01546A6NGU7 62 aa7.68□□□□□ -1.18
HDLBP-242ENST00000488013 H7C423 109 aa7.68□□□□□ -1.18
HDLBP-242ENST00000488013 CCL18P55774 89 aa7.68□□□□□ -1.18
HDLBP-242ENST00000488013 LAGE3Q14657 143 aa7.68□□□□□ -1.18
HDLBP-242ENST00000488013 IGLV2-18A0A075B6J9 118 aa7.67□□□□□ -1.18
HDLBP-242ENST00000488013 TRBV6-8A0A0A6YYG3 113 aa7.67□□□□□ -1.18
HDLBP-242ENST00000488013 S100A6P06703 90 aa7.67□□□□□ -1.18
HDLBP-242ENST00000488013 IFI27P40305 119 aaPredicted RBP7.67□□□□□ -1.18
HDLBP-242ENST00000488013 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
HDLBP-242ENST00000488013 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
HDLBP-242ENST00000488013 LELP1Q5T871 98 aa7.67□□□□□ -1.18
HDLBP-242ENST00000488013 NIT1Q86X76 327 aa7.67□□□□□ -1.18
HDLBP-242ENST00000488013 Q9UF83 564 aa7.67□□□□□ -1.18
HDLBP-242ENST00000488013 TRAV8-6A0A0B4J262 113 aa7.66□□□□□ -1.18
HDLBP-242ENST00000488013 HSBP1O75506 76 aa7.66□□□□□ -1.18
HDLBP-242ENST00000488013 AMTP48728 403 aa7.66□□□□□ -1.18
HDLBP-242ENST00000488013 LYPD5Q6UWN5 251 aa7.66□□□□□ -1.18
HDLBP-242ENST00000488013 TMEM243Q9BU79 118 aa7.66□□□□□ -1.18
HDLBP-242ENST00000488013 TSHBP01222 138 aa7.65□□□□□ -1.18
HDLBP-242ENST00000488013 RNASEKQ6P5S7 137 aaKnown RBP7.65□□□□□ -1.18
HDLBP-242ENST00000488013 IGHV3-38A0A0C4DH36 116 aa7.64□□□□□ -1.19
HDLBP-242ENST00000488013 UBE2L6O14933 153 aa7.64□□□□□ -1.19
HDLBP-242ENST00000488013 NPSP0C0P6 89 aa7.64□□□□□ -1.19
HDLBP-242ENST00000488013 ESDP10768 282 aa7.64□□□□□ -1.19
HDLBP-242ENST00000488013 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
HDLBP-242ENST00000488013 APLNQ9ULZ1 77 aa7.64□□□□□ -1.19
HDLBP-242ENST00000488013 CYSLTR1Q9Y271 337 aa7.64□□□□□ -1.19
HDLBP-242ENST00000488013 K7EP13 123 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 SERF1AO75920 110 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 HBDP02042 147 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 ZNF25P17030 456 aaPredicted RBP7.63□□□□□ -1.19
HDLBP-242ENST00000488013 NDUFA6P56556 154 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 PAPPA-AS1Q5QFB9 102 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 C20orf203Q8NBC4 194 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 CHCHD5Q9BSY4 110 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 COL7A1Q02388 2944 aa7.63□□□□□ -1.19
HDLBP-242ENST00000488013 ESRGQ1W209 222 aa7.62□□□□□ -1.19
HDLBP-242ENST00000488013 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
HDLBP-242ENST00000488013 PACRGQ96M98 296 aaPredicted RBP7.62□□□□□ -1.19
HDLBP-242ENST00000488013 UPK3BQ9BT76 320 aa7.62□□□□□ -1.19
HDLBP-242ENST00000488013 TIMM21Q9BVV7 248 aa7.62□□□□□ -1.19
HDLBP-242ENST00000488013 SPANXA1Q9NS26 97 aa7.62□□□□□ -1.19
HDLBP-242ENST00000488013 MRPS16Q9Y3D3 137 aaKnown RBP7.62□□□□□ -1.19
HDLBP-242ENST00000488013 CSDC2Q9Y534 153 aaKnown RBP7.62□□□□□ -1.19
HDLBP-242ENST00000488013 ATP5LO75964 103 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 BTF3P20290 206 aaKnown RBP7.61□□□□□ -1.19
HDLBP-242ENST00000488013 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 ZFAND6Q6FIF0 208 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 DGAT2L7PQ6IED9 249 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 C2orf66Q6UXQ4 117 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 TOMM6Q96B49 74 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 TMEM141Q96I45 108 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 TMEM101Q96IK0 257 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 HSPB8Q9UJY1 196 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 PYGO1Q9Y3Y4 419 aa7.61□□□□□ -1.19
HDLBP-242ENST00000488013 TRAV9-2A0A087WT02 112 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 A0A087WX48 190 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 S100A2P29034 98 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 MRPL52Q86TS9 123 aaKnown RBP7.6□□□□□ -1.19
HDLBP-242ENST00000488013 UBE2DNLQ8IWF7 75 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 URB1-AS1Q96HZ7 61 aa7.6□□□□□ -1.19
HDLBP-242ENST00000488013 Q6ZN92 141 aa7.59□□□□□ -1.19
HDLBP-242ENST00000488013 ERASQ7Z444 233 aa7.59□□□□□ -1.19
HDLBP-242ENST00000488013 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
HDLBP-242ENST00000488013 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
HDLBP-242ENST00000488013 TIMM17AQ99595 171 aa7.59□□□□□ -1.19
HDLBP-242ENST00000488013 LINC00588Q9Y4M8 146 aa7.59□□□□□ -1.19
HDLBP-242ENST00000488013 NACAE9PAV3 2078 aa7.59□□□□□ -1.19
HDLBP-242ENST00000488013 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.58□□□□□ -1.2
HDLBP-242ENST00000488013 LEPROTL1O95214 131 aa7.58□□□□□ -1.2
HDLBP-242ENST00000488013 FGF6P10767 208 aa7.58□□□□□ -1.2
HDLBP-242ENST00000488013 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
HDLBP-242ENST00000488013 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
HDLBP-242ENST00000488013 LGALS9CQ6DKI2 356 aa7.58□□□□□ -1.2
HDLBP-242ENST00000488013 C10orf126Q8N4M7 172 aa7.58□□□□□ -1.2
HDLBP-242ENST00000488013 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.57□□□□□ -1.2
HDLBP-242ENST00000488013 IGKV2-29A2NJV5 120 aaPredicted RBP7.57□□□□□ -1.2
HDLBP-242ENST00000488013 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
HDLBP-242ENST00000488013 SIVA1O15304 175 aa7.57□□□□□ -1.2
HDLBP-242ENST00000488013 DNAH10OSP0CZ25 163 aa7.57□□□□□ -1.2
HDLBP-242ENST00000488013 GAGE6Q13070 117 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms