RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 UBE2D3P61077 147 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 UBE2D2P62837 147 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 RPL36AP83881 106 aaKnown RBP6.67□□□□□ -1.34
SF3B1-211ENST00000487698 SPATA45Q537H7 98 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 ZNRF2Q8NHG8 242 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 RPL36ALQ969Q0 106 aaKnown RBP6.67□□□□□ -1.34
SF3B1-211ENST00000487698 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 TRGV4A0A0C4DH28 118 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 DEFB4AO15263 64 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 LINC00694P0DN24 101 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 KPRPQ5T749 579 aaPredicted RBP6.67□□□□□ -1.34
SF3B1-211ENST00000487698 BAALCQ8WXS3 180 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
SF3B1-211ENST00000487698 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
SF3B1-211ENST00000487698 A0A087WX48 190 aa6.66□□□□□ -1.34
SF3B1-211ENST00000487698 Q6ZN92 141 aa6.66□□□□□ -1.34
SF3B1-211ENST00000487698 PHLDA1Q8WV24 401 aaPredicted RBP6.66□□□□□ -1.34
SF3B1-211ENST00000487698 TMEM141Q96I45 108 aa6.66□□□□□ -1.34
SF3B1-211ENST00000487698 CELA1Q9UNI1 258 aa6.66□□□□□ -1.34
SF3B1-211ENST00000487698 IGHV3-38A0A0C4DH36 116 aa6.65□□□□□ -1.34
SF3B1-211ENST00000487698 hDV102S1A0JD36 115 aa6.65□□□□□ -1.34
SF3B1-211ENST00000487698 COTL1Q14019 142 aa6.65□□□□□ -1.34
SF3B1-211ENST00000487698 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.34
SF3B1-211ENST00000487698 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.34
SF3B1-211ENST00000487698 LOC100131303A0A0U1RQF7 123 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 GAGE12JA6NER3 117 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 LINC00587B1AMM8 73 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 DDTP30046 118 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 GAGE1Q13065 139 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 GAGE4Q13068 117 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 GAGE5Q13069 117 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 GAGE13Q4V321 117 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 RETNQ9HD89 108 aa6.65□□□□□ -1.35
SF3B1-211ENST00000487698 MRPL35Q9NZE8 188 aaKnown RBP6.65□□□□□ -1.35
SF3B1-211ENST00000487698 FAM104AQ969W3 186 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 PRADC1Q9BSG0 188 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 HHLA3Q9XRX5 114 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 PYGO1Q9Y3Y4 419 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 F8VRH5 84 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 DPM2O94777 84 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 SPART-AS1P0CW21 52 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 CRYBA4P53673 196 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 DAD1P61803 113 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
SF3B1-211ENST00000487698 PRSS29PA6NIE9 313 aa6.63□□□□□ -1.35
SF3B1-211ENST00000487698 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
SF3B1-211ENST00000487698 IGKCP01834 107 aa6.63□□□□□ -1.35
SF3B1-211ENST00000487698 NPSP0C0P6 89 aa6.63□□□□□ -1.35
SF3B1-211ENST00000487698 GTSF1LQ9H1H1 148 aa6.63□□□□□ -1.35
SF3B1-211ENST00000487698 CHTOPQ9Y3Y2 248 aaKnown RBP6.63□□□□□ -1.35
SF3B1-211ENST00000487698 IGLV4-3A0A075B6K6 122 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 K7EIL1 84 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 PLNP26678 52 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 PMVKQ15126 192 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 SBSPONQ8IVN8 264 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-211ENST00000487698 MIEN1Q9BRT3 115 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 C11orf68Q9H3H3 251 aaKnown RBP6.62□□□□□ -1.35
SF3B1-211ENST00000487698 CST9LQ9H4G1 147 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 SPANXA1Q9NS26 97 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 PRO0255Q9UI72 69 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-211ENST00000487698 IGKV2-29A2NJV5 120 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-211ENST00000487698 PRB2P02812 416 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-211ENST00000487698 ANKRD39Q53RE8 183 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 STPG4Q8N801 248 aa6.62□□□□□ -1.35
SF3B1-211ENST00000487698 IGLV4-69A0A075B6H9 119 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 ATP5G1P05496 136 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 TIMM21Q9BVV7 248 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 UQCR10Q9UDW1 63 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 CEMP1Q6PRD7 247 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-211ENST00000487698 C14orf144Q96I85 54 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 AMELXQ99217 191 aa6.61□□□□□ -1.35
SF3B1-211ENST00000487698 GYPEP15421 78 aa6.6□□□□□ -1.35
SF3B1-211ENST00000487698 PAPPA-AS1Q5QFB9 102 aa6.6□□□□□ -1.35
SF3B1-211ENST00000487698 MRPL52Q86TS9 123 aaKnown RBP6.6□□□□□ -1.35
SF3B1-211ENST00000487698 LURAP1LQ8IV03 231 aa6.6□□□□□ -1.35
SF3B1-211ENST00000487698 PAX4O43316 350 aa6.59□□□□□ -1.35
SF3B1-211ENST00000487698 MRPS36P82909 103 aaKnown RBP6.59□□□□□ -1.35
SF3B1-211ENST00000487698 C12orf74Q32Q52 190 aa6.59□□□□□ -1.35
SF3B1-211ENST00000487698 TM2D3Q9BRN9 247 aa6.59□□□□□ -1.35
SF3B1-211ENST00000487698 C11orf86A6NJI1 115 aa6.59□□□□□ -1.35
SF3B1-211ENST00000487698 COX8AP10176 69 aa6.59□□□□□ -1.35
SF3B1-211ENST00000487698 TMEM243Q9BU79 118 aa6.59□□□□□ -1.35
SF3B1-211ENST00000487698 TP73-AS1Q9UF72 201 aa6.59□□□□□ -1.35
SF3B1-211ENST00000487698 CSDC2Q9Y534 153 aaKnown RBP6.59□□□□□ -1.35
SF3B1-211ENST00000487698 TRBV25-1A0A075B6N4 114 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 H7C423 109 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 FGF6P10767 208 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 TMEM97Q5BJF2 176 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 Q6ZUT4 128 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 ATP6V0E2Q8NHE4 81 aa6.58□□□□□ -1.36
SF3B1-211ENST00000487698 SPATA25Q9BR10 227 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 201.4 ms