RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 SDIM1Q6ZPB5 146 aa8.88□□□□□ -0.99
SCAF4-206ENST00000485790 SMIM15Q7Z3B0 74 aa8.88□□□□□ -0.99
SCAF4-206ENST00000485790 SULT1A2P50226 295 aa8.87□□□□□ -0.99
SCAF4-206ENST00000485790 KRTAP26-1Q6PEX3 210 aa8.87□□□□□ -0.99
SCAF4-206ENST00000485790 PGLYRP4Q96LB8 373 aa8.87□□□□□ -0.99
SCAF4-206ENST00000485790 IGHV3-64A0A075B6Q5 118 aa8.86□□□□□ -0.99
SCAF4-206ENST00000485790 AMTP48728 403 aa8.86□□□□□ -0.99
SCAF4-206ENST00000485790 KRTAP10-4P60372 401 aaPredicted RBP8.86□□□□□ -0.99
SCAF4-206ENST00000485790 CNBPP62633 177 aaKnown RBP8.86□□□□□ -0.99
SCAF4-206ENST00000485790 NUDT10Q8NFP7 164 aa8.86□□□□□ -0.99
SCAF4-206ENST00000485790 NUDT11Q96G61 164 aa8.86□□□□□ -0.99
SCAF4-206ENST00000485790 TEX261Q6UWH6 196 aa8.85□□□□□ -0.99
SCAF4-206ENST00000485790 C20orf203Q8NBC4 194 aa8.85□□□□□ -0.99
SCAF4-206ENST00000485790 BCL2P10415 239 aa8.84□□□□□ -0.99
SCAF4-206ENST00000485790 AMMECR1LQ6DCA0 310 aa8.84□□□□□ -0.99
SCAF4-206ENST00000485790 SLC51BQ86UW2 128 aa8.84□□□□□ -0.99
SCAF4-206ENST00000485790 RNF185Q96GF1 192 aa8.84□□□□□ -0.99
SCAF4-206ENST00000485790 IGLV4-60A0A075B6I1 120 aa8.83□□□□□ -1
SCAF4-206ENST00000485790 RPP21Q9H633 154 aaKnown RBP8.83□□□□□ -1
SCAF4-206ENST00000485790 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
SCAF4-206ENST00000485790 TRBV20OR9-2A0A075B6H5 130 aa8.81□□□□□ -1
SCAF4-206ENST00000485790 H7C423 109 aa8.81□□□□□ -1
SCAF4-206ENST00000485790 NCR2O95944 276 aa8.81□□□□□ -1
SCAF4-206ENST00000485790 CTRLP40313 264 aa8.81□□□□□ -1
SCAF4-206ENST00000485790 OCC1Q8TAD7 63 aa8.81□□□□□ -1
SCAF4-206ENST00000485790 CNFNQ9BYD5 112 aa8.81□□□□□ -1
SCAF4-206ENST00000485790 GAGE12HA6NDE8 117 aa8.8□□□□□ -1
SCAF4-206ENST00000485790 A8MWL6 223 aa8.8□□□□□ -1
SCAF4-206ENST00000485790 RNASEKQ6P5S7 137 aaKnown RBP8.8□□□□□ -1
SCAF4-206ENST00000485790 GATD1Q8NB37 220 aa8.8□□□□□ -1
SCAF4-206ENST00000485790 PLA2G2DQ9UNK4 145 aa8.8□□□□□ -1
SCAF4-206ENST00000485790 IGKV3OR2-268A0A0C4DH90 116 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 PMCHP20382 165 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 RPS10P46783 165 aaKnown RBP8.79□□□□□ -1
SCAF4-206ENST00000485790 CIRBPQ14011 172 aaKnown RBP8.79□□□□□ -1
SCAF4-206ENST00000485790 Q6ZRU5 148 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 TCTE3Q8IZS6 198 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 C7orf33Q8WU49 177 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 BORCS7Q96B45 105 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 TMEM101Q96IK0 257 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 BTF3L4Q96K17 158 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 FAM210AQ96ND0 272 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 GFRA4Q9GZZ7 299 aa8.79□□□□□ -1
SCAF4-206ENST00000485790 RNASE7Q9H1E1 156 aaKnown RBP8.79□□□□□ -1
SCAF4-206ENST00000485790 PANO1I0J062 215 aa8.78□□□□□ -1
SCAF4-206ENST00000485790 GATCO43716 136 aaKnown RBP8.78□□□□□ -1
SCAF4-206ENST00000485790 APCSP02743 223 aa8.78□□□□□ -1
SCAF4-206ENST00000485790 BLOC1S1P78537 153 aa8.78□□□□□ -1
SCAF4-206ENST00000485790 A0A087WYN8 130 aa8.77□□□□□ -1.01
SCAF4-206ENST00000485790 TRAV26-2A0A0B4J265 109 aa8.77□□□□□ -1.01
SCAF4-206ENST00000485790 I3L3M4 83 aa8.77□□□□□ -1.01
SCAF4-206ENST00000485790 SLPIP03973 132 aa8.77□□□□□ -1.01
SCAF4-206ENST00000485790 CHCHD10Q8WYQ3 142 aaPredicted RBP8.77□□□□□ -1.01
SCAF4-206ENST00000485790 SDHAF1A6NFY7 115 aa8.76□□□□□ -1.01
SCAF4-206ENST00000485790 TMEM250H0YL14 139 aa8.76□□□□□ -1.01
SCAF4-206ENST00000485790 FGF6P10767 208 aa8.76□□□□□ -1.01
SCAF4-206ENST00000485790 ZNF25P17030 456 aaPredicted RBP8.76□□□□□ -1.01
SCAF4-206ENST00000485790 COX6A2Q02221 97 aa8.76□□□□□ -1.01
SCAF4-206ENST00000485790 PKIGQ9Y2B9 76 aa8.76□□□□□ -1.01
SCAF4-206ENST00000485790 LRP1Q07954 4544 aaKnown RBP8.75□□□□□ -1.01
SCAF4-206ENST00000485790 K7EN84 100 aa8.75□□□□□ -1.01
SCAF4-206ENST00000485790 NDUFS6O75380 124 aaKnown RBP8.75□□□□□ -1.01
SCAF4-206ENST00000485790 FAM231DQ6ZW35 169 aa8.75□□□□□ -1.01
SCAF4-206ENST00000485790 SPACA4Q8TDM5 124 aa8.75□□□□□ -1.01
SCAF4-206ENST00000485790 GTSF1Q8WW33 167 aa8.75□□□□□ -1.01
SCAF4-206ENST00000485790 PLAC8Q9NZF1 115 aa8.75□□□□□ -1.01
SCAF4-206ENST00000485790 LINC00474Q9P2X8 69 aa8.75□□□□□ -1.01
SCAF4-206ENST00000485790 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
SCAF4-206ENST00000485790 FOXA3P55318 350 aaPredicted RBP8.74□□□□□ -1.01
SCAF4-206ENST00000485790 MAJINQ3KP22 176 aa8.74□□□□□ -1.01
SCAF4-206ENST00000485790 Q6ZNX1 250 aa8.74□□□□□ -1.01
SCAF4-206ENST00000485790 RPL39LQ96EH5 51 aaKnown RBP8.74□□□□□ -1.01
SCAF4-206ENST00000485790 ST20Q9HBF5 79 aa8.74□□□□□ -1.01
SCAF4-206ENST00000485790 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
SCAF4-206ENST00000485790 TRBV6-5A0A0K0K1A5 114 aa8.73□□□□□ -1.01
SCAF4-206ENST00000485790 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
SCAF4-206ENST00000485790 CHTF8P0CG12 524 aa8.73□□□□□ -1.01
SCAF4-206ENST00000485790 CEBPGP53567 150 aa8.73□□□□□ -1.01
SCAF4-206ENST00000485790 SS18Q15532 418 aa8.73□□□□□ -1.01
SCAF4-206ENST00000485790 HIGD2BQ4VC39 106 aa8.73□□□□□ -1.01
SCAF4-206ENST00000485790 C15orf56Q8N910 161 aa8.73□□□□□ -1.01
SCAF4-206ENST00000485790 OR5A1Q8NGJ0 315 aa8.73□□□□□ -1.01
SCAF4-206ENST00000485790 HMCN2Q8NDA2 5059 aa8.72□□□□□ -1.01
SCAF4-206ENST00000485790 GVQW2A0A096LPI5 108 aaPredicted RBP8.72□□□□□ -1.01
SCAF4-206ENST00000485790 XCL1P47992 114 aa8.72□□□□□ -1.01
SCAF4-206ENST00000485790 SMAGPQ0VAQ4 97 aa8.72□□□□□ -1.01
SCAF4-206ENST00000485790 CT83Q5H943 113 aa8.72□□□□□ -1.01
SCAF4-206ENST00000485790 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
SCAF4-206ENST00000485790 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.02
SCAF4-206ENST00000485790 A0A1B0GUT8 65 aa8.71□□□□□ -1.02
SCAF4-206ENST00000485790 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
SCAF4-206ENST00000485790 PPP1R17O96001 155 aa8.71□□□□□ -1.02
SCAF4-206ENST00000485790 PRSS3P2Q8NHM4 247 aa8.71□□□□□ -1.02
SCAF4-206ENST00000485790 MRAP2Q96G30 205 aa8.71□□□□□ -1.02
SCAF4-206ENST00000485790 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 LINC00959A0A1B0GUT2 108 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 VCYO14598 125 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 PHOX2AO14813 284 aa8.7□□□□□ -1.02
SCAF4-206ENST00000485790 FOXI1Q12951 378 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms