RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 KDM3BQ7LBC6 1761 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 C2CD3Q4AC94 2353 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 TNRC6BQ9UPQ9 1833 aaKnown RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 TRPM7Q96QT4 1865 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 TRBV6-7A0A0A0MS04 114 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 TRAV10A0A0B4J240 114 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 A0A1W2PPM0 123 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 M0R129 80 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 CDC42EP2O14613 210 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 KLF7O75840 302 aaPredicted RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 LYNX1P0DP58 116 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 CCL4P13236 92 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 HIST1H1DP16402 221 aaKnown RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 FAUP35544 74 aaKnown RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 SNRPGP62308 76 aaKnown RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 SEC11AP67812 179 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 PMCHL1Q16048 86 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 C1orf137Q5JT78 98 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 RPL7L1Q6DKI1 246 aaKnown RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 CLECL1Q8IZS7 167 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 C10orf111Q8N326 155 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 PPP1R1CQ8WVI7 109 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 AMELYQ99218 206 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 C20orf78Q9BR46 151 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 ABRACLQ9P1F3 81 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 IER3IP1Q9Y5U9 82 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 EXPH5Q8NEV8 1989 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 TOPAZ1Q8N9V7 1692 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 TPRP12270 2363 aaKnown RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 PHLPP1O60346 1717 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 C4AP0C0L4 1744 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 C4BP0C0L5 1744 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.57□□□□□ -2.16
SRRM1-213ENST00000485441 COL6A3P12111 3177 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 FREM3P0C091 2139 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 MUC4Q99102 2169 aa1.57□□□□□ -2.16
SRRM1-213ENST00000485441 SZT2Q5T011 3432 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 HELZP42694 1942 aaKnown RBP1.56□□□□□ -2.16
SRRM1-213ENST00000485441 FAM208BQ5VWN6 2430 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 CHD3Q12873 2000 aaKnown RBP1.56□□□□□ -2.16
SRRM1-213ENST00000485441 MYO3AQ8NEV4 1616 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 MROH2AA6NES4 1674 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 TRBV20-1A0A075B6N2 111 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 IGKV3D-7A0A0C4DH55 119 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 IGKV3OR2-268A0A0C4DH90 116 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 FAM236AA0A1B0GUQ0 79 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 FAM236BA0A1B0GV22 79 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 LOC107986453A0A1B0GWG9 222 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 C5orf67F2Z3F1 127 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 F8W1H4 67 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 ERC2-IT1O76042 136 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 TRACP01848 142 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 PRH1P02810 166 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 LINC00032P0C843 101 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 HLA-DRB4P13762 266 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 BLCAPP62952 87 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 Q0VG73 95 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 CIRBPQ14011 172 aaKnown RBP1.56□□□□□ -2.16
SRRM1-213ENST00000485441 WFDC2Q14508 124 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 C2orf82Q6UX34 121 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.56□□□□□ -2.16
SRRM1-213ENST00000485441 BAGE3Q86Y29 109 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 BAGE2Q86Y30 109 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 ATP6V0E2Q8NHE4 81 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 C18orf32Q8TCD1 76 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 AQP10Q96PS8 301 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 NABP2Q9BQ15 211 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 PMCHL2Q9BQD1 86 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 FAM103A1Q9BTL3 118 aaKnown RBP1.56□□□□□ -2.16
SRRM1-213ENST00000485441 CST11Q9H112 138 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 RPRMQ9NS64 109 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 NOP16Q9Y3C1 178 aaKnown RBP1.56□□□□□ -2.16
SRRM1-213ENST00000485441 HLA-DRB4X5D2U9 266 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 UTRNP46939 3433 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 SPTBN4Q9H254 2564 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 KIDINS220Q9ULH0 1771 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 EYSQ5T1H1 3165 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 KIAA1549LQ6ZVL6 1849 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 MRC1P22897 1456 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 JMJD1CQ15652 2540 aa1.56□□□□□ -2.16
SRRM1-213ENST00000485441 USP32Q8NFA0 1604 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 CICQ96RK0 1608 aaPredicted RBP1.55□□□□□ -2.16
SRRM1-213ENST00000485441 CUL7Q14999 1698 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 SPTBN5Q9NRC6 3674 aaKnown RBP1.55□□□□□ -2.16
SRRM1-213ENST00000485441 ZNF736B4DX44 427 aaPredicted RBP1.55□□□□□ -2.16
SRRM1-213ENST00000485441 TMEM262E9PQX1 116 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 NCR2O95944 276 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 C3orf79P0CE67 100 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 SNRPD3P62318 126 aaKnown RBP1.55□□□□□ -2.16
SRRM1-213ENST00000485441 INSL4Q14641 139 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 ETDBQ3ZM63 59 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 C9orf153Q5TBE3 101 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 NCBP2-AS2Q69YL0 99 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 KRTAP26-1Q6PEX3 210 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 ZNF833PQ6ZTB9 187 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 TEN1Q86WV5 123 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 ATOH7Q8N100 152 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 LINC00269Q8N2A0 174 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 Q8TAT8 98 aa1.55□□□□□ -2.16
SRRM1-213ENST00000485441 FAM213BQ8TBF2 198 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms