RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 HIST1H2BLQ99880 126 aa10.11□□□□□ -0.79
LRIF1-202ENST00000485275 AMTP48728 403 aa10.1□□□□□ -0.79
LRIF1-202ENST00000485275 LAGE3Q14657 143 aa10.09□□□□□ -0.79
LRIF1-202ENST00000485275 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
LRIF1-202ENST00000485275 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
LRIF1-202ENST00000485275 DAZ4Q86SG3 579 aaKnown RBP10.09□□□□□ -0.79
LRIF1-202ENST00000485275 CHCHD7Q9BUK0 85 aa10.09□□□□□ -0.79
LRIF1-202ENST00000485275 DAZ3Q9NR90 486 aaKnown RBP10.09□□□□□ -0.79
LRIF1-202ENST00000485275 PLECQ15149 4684 aaKnown RBP10.08□□□□□ -0.8
LRIF1-202ENST00000485275 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
LRIF1-202ENST00000485275 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
LRIF1-202ENST00000485275 FABP4P15090 132 aa10.08□□□□□ -0.8
LRIF1-202ENST00000485275 RPL39P62891 51 aaKnown RBP10.08□□□□□ -0.8
LRIF1-202ENST00000485275 TGP01266 2768 aa10.08□□□□□ -0.8
LRIF1-202ENST00000485275 K7EMI3 77 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 NUDT3O95989 172 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 HBDP02042 147 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 BTF3P20290 206 aaKnown RBP10.06□□□□□ -0.8
LRIF1-202ENST00000485275 FCER1GP30273 86 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 COTL1Q14019 142 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 ORMDL2Q53FV1 153 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 LYSTQ99698 3801 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 H3BNG1 76 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 ICOSQ9Y6W8 199 aa10.06□□□□□ -0.8
LRIF1-202ENST00000485275 S100A2P29034 98 aa10.05□□□□□ -0.8
LRIF1-202ENST00000485275 C2orf66Q6UXQ4 117 aa10.05□□□□□ -0.8
LRIF1-202ENST00000485275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.04□□□□□ -0.8
LRIF1-202ENST00000485275 IGKV2-29A2NJV5 120 aaPredicted RBP10.04□□□□□ -0.8
LRIF1-202ENST00000485275 MRPL23Q16540 153 aaKnown RBP10.04□□□□□ -0.8
LRIF1-202ENST00000485275 C20orf203Q8NBC4 194 aa10.04□□□□□ -0.8
LRIF1-202ENST00000485275 TMEM18Q96B42 140 aa10.04□□□□□ -0.8
LRIF1-202ENST00000485275 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
LRIF1-202ENST00000485275 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
LRIF1-202ENST00000485275 TRBV6-8A0A0A6YYG3 113 aa10.03□□□□□ -0.8
LRIF1-202ENST00000485275 PACRGQ96M98 296 aaPredicted RBP10.03□□□□□ -0.8
LRIF1-202ENST00000485275 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
LRIF1-202ENST00000485275 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
LRIF1-202ENST00000485275 CEMP1Q6PRD7 247 aaPredicted RBP10.02□□□□□ -0.81
LRIF1-202ENST00000485275 SPATA12Q7Z6I5 190 aa10.01□□□□□ -0.81
LRIF1-202ENST00000485275 OR10D4PQ8NGN7 298 aa10.01□□□□□ -0.81
LRIF1-202ENST00000485275 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
LRIF1-202ENST00000485275 IGIPA6NJ69 53 aa10.01□□□□□ -0.81
LRIF1-202ENST00000485275 IGLL5B9A064 214 aa10.01□□□□□ -0.81
LRIF1-202ENST00000485275 TRBV25-1A0A075B6N4 114 aa10□□□□□ -0.81
LRIF1-202ENST00000485275 LYPD5Q6UWN5 251 aa10□□□□□ -0.81
LRIF1-202ENST00000485275 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
LRIF1-202ENST00000485275 UBE2D4Q9Y2X8 147 aa10□□□□□ -0.81
LRIF1-202ENST00000485275 DNAH1Q9P2D7 4330 aa9.99□□□□□ -0.81
LRIF1-202ENST00000485275 C3orf79P0CE67 100 aa9.99□□□□□ -0.81
LRIF1-202ENST00000485275 ESRGQ1W209 222 aa9.99□□□□□ -0.81
LRIF1-202ENST00000485275 Q8N3U1 123 aa9.99□□□□□ -0.81
LRIF1-202ENST00000485275 TMEM243Q9BU79 118 aa9.99□□□□□ -0.81
LRIF1-202ENST00000485275 ZC2HC1BQ5TFG8 222 aa9.98□□□□□ -0.81
LRIF1-202ENST00000485275 GAGE6Q13070 117 aa9.98□□□□□ -0.81
LRIF1-202ENST00000485275 SH2D6Q7Z4S9 175 aa9.98□□□□□ -0.81
LRIF1-202ENST00000485275 IFI27L1Q96BM0 104 aa9.98□□□□□ -0.81
LRIF1-202ENST00000485275 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
LRIF1-202ENST00000485275 FGF6P10767 208 aa9.97□□□□□ -0.81
LRIF1-202ENST00000485275 ERASQ7Z444 233 aa9.97□□□□□ -0.81
LRIF1-202ENST00000485275 Q8N976 141 aa9.97□□□□□ -0.81
LRIF1-202ENST00000485275 C15orf53Q8NAA6 179 aa9.97□□□□□ -0.81
LRIF1-202ENST00000485275 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 AKR1D1P51857 326 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 KRTDAPP60985 99 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 TMEM97Q5BJF2 176 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 RNASE13Q5GAN3 156 aaKnown RBP9.96□□□□□ -0.81
LRIF1-202ENST00000485275 LELP1Q5T871 98 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 Q6ZUT4 128 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 TIMM17AQ99595 171 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 HSPB8Q9UJY1 196 aa9.96□□□□□ -0.81
LRIF1-202ENST00000485275 TIRAPP58753 221 aa9.96□□□□□ -0.82
LRIF1-202ENST00000485275 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
LRIF1-202ENST00000485275 BAALCQ8WXS3 180 aa9.96□□□□□ -0.82
LRIF1-202ENST00000485275 APLNQ9ULZ1 77 aa9.96□□□□□ -0.82
LRIF1-202ENST00000485275 IGLV4-60A0A075B6I1 120 aa9.95□□□□□ -0.82
LRIF1-202ENST00000485275 H0Y8G0 127 aa9.95□□□□□ -0.82
LRIF1-202ENST00000485275 SYS1-DBNDD2H3BUS1 97 aa9.95□□□□□ -0.82
LRIF1-202ENST00000485275 MRPL52Q86TS9 123 aaKnown RBP9.95□□□□□ -0.82
LRIF1-202ENST00000485275 WFDC10BQ8IUB3 73 aa9.95□□□□□ -0.82
LRIF1-202ENST00000485275 PYGO1Q9Y3Y4 419 aa9.95□□□□□ -0.82
LRIF1-202ENST00000485275 NUPR2A6NF83 97 aa9.94□□□□□ -0.82
LRIF1-202ENST00000485275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.94□□□□□ -0.82
LRIF1-202ENST00000485275 ATP5LO75964 103 aa9.94□□□□□ -0.82
LRIF1-202ENST00000485275 PYY3Q5JQD4 70 aa9.94□□□□□ -0.82
LRIF1-202ENST00000485275 ZFAND6Q6FIF0 208 aa9.94□□□□□ -0.82
LRIF1-202ENST00000485275 SPANXA1Q9NS26 97 aa9.94□□□□□ -0.82
LRIF1-202ENST00000485275 TENM2Q9NT68 2774 aa9.94□□□□□ -0.82
LRIF1-202ENST00000485275 UBE2L6O14933 153 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 G0S2P27469 103 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 PMCHL2Q9BQD1 86 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 TIMM21Q9BVV7 248 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 LINC00588Q9Y4M8 146 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 VPS13DQ5THJ4 4388 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 H7C423 109 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 MAP1LC3CQ9BXW4 147 aa9.93□□□□□ -0.82
LRIF1-202ENST00000485275 RBX1P62877 108 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms