RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 TRBV20OR9-2A0A075B6H5 130 aa13.01□□□□□ -0.33
ACTB-212ENST00000484841 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.01□□□□□ -0.33
ACTB-212ENST00000484841 KRTAP26-1Q6PEX3 210 aa13.01□□□□□ -0.33
ACTB-212ENST00000484841 TCTE3Q8IZS6 198 aa13.01□□□□□ -0.33
ACTB-212ENST00000484841 DPH3Q96FX2 82 aa13.01□□□□□ -0.33
ACTB-212ENST00000484841 IGLV4-60A0A075B6I1 120 aa13□□□□□ -0.33
ACTB-212ENST00000484841 OXTP01178 125 aa13□□□□□ -0.33
ACTB-212ENST00000484841 CTRLP40313 264 aa13□□□□□ -0.33
ACTB-212ENST00000484841 MYCBP2O75592 4640 aa12.99□□□□□ -0.33
ACTB-212ENST00000484841 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
ACTB-212ENST00000484841 RNASE7Q9H1E1 156 aaKnown RBP12.98□□□□□ -0.33
ACTB-212ENST00000484841 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
ACTB-212ENST00000484841 KRTAP10-4P60372 401 aaPredicted RBP12.97□□□□□ -0.33
ACTB-212ENST00000484841 SERTAD4-AS1Q5TG53 156 aa12.97□□□□□ -0.33
ACTB-212ENST00000484841 OCC1Q8TAD7 63 aa12.97□□□□□ -0.33
ACTB-212ENST00000484841 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.97□□□□□ -0.33
ACTB-212ENST00000484841 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.33
ACTB-212ENST00000484841 CNBPP62633 177 aaKnown RBP12.96□□□□□ -0.33
ACTB-212ENST00000484841 CFAP161Q6P656 301 aa12.96□□□□□ -0.33
ACTB-212ENST00000484841 TEX261Q6UWH6 196 aa12.95□□□□□ -0.34
ACTB-212ENST00000484841 SDIM1Q6ZPB5 146 aa12.95□□□□□ -0.34
ACTB-212ENST00000484841 CNFNQ9BYD5 112 aa12.95□□□□□ -0.34
ACTB-212ENST00000484841 GATD1Q8NB37 220 aa12.94□□□□□ -0.34
ACTB-212ENST00000484841 BORCS7Q96B45 105 aa12.94□□□□□ -0.34
ACTB-212ENST00000484841 GFRA4Q9GZZ7 299 aa12.94□□□□□ -0.34
ACTB-212ENST00000484841 TRAV26-2A0A0B4J265 109 aa12.93□□□□□ -0.34
ACTB-212ENST00000484841 K7EN84 100 aa12.93□□□□□ -0.34
ACTB-212ENST00000484841 GATCO43716 136 aaKnown RBP12.93□□□□□ -0.34
ACTB-212ENST00000484841 NCR2O95944 276 aa12.93□□□□□ -0.34
ACTB-212ENST00000484841 APCSP02743 223 aa12.93□□□□□ -0.34
ACTB-212ENST00000484841 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
ACTB-212ENST00000484841 GAGE12HA6NDE8 117 aa12.92□□□□□ -0.34
ACTB-212ENST00000484841 A8MWL6 223 aa12.92□□□□□ -0.34
ACTB-212ENST00000484841 BLOC1S1P78537 153 aa12.92□□□□□ -0.34
ACTB-212ENST00000484841 CEBPGP53567 150 aa12.91□□□□□ -0.34
ACTB-212ENST00000484841 TMEM250H0YL14 139 aa12.9□□□□□ -0.34
ACTB-212ENST00000484841 H7C423 109 aa12.9□□□□□ -0.34
ACTB-212ENST00000484841 GTSF1Q8WW33 167 aa12.9□□□□□ -0.34
ACTB-212ENST00000484841 RPL39LQ96EH5 51 aaKnown RBP12.9□□□□□ -0.34
ACTB-212ENST00000484841 RNF185Q96GF1 192 aa12.9□□□□□ -0.34
ACTB-212ENST00000484841 BTF3L4Q96K17 158 aa12.9□□□□□ -0.34
ACTB-212ENST00000484841 PANO1I0J062 215 aa12.89□□□□□ -0.35
ACTB-212ENST00000484841 PMCHP20382 165 aa12.89□□□□□ -0.35
ACTB-212ENST00000484841 Q6ZNX1 250 aa12.89□□□□□ -0.35
ACTB-212ENST00000484841 SDHAF1A6NFY7 115 aa12.88□□□□□ -0.35
ACTB-212ENST00000484841 FAM231DQ6ZW35 169 aa12.88□□□□□ -0.35
ACTB-212ENST00000484841 AKAP14Q86UN6 197 aa12.88□□□□□ -0.35
ACTB-212ENST00000484841 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
ACTB-212ENST00000484841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.87□□□□□ -0.35
ACTB-212ENST00000484841 IGKV2-29A2NJV5 120 aaPredicted RBP12.87□□□□□ -0.35
ACTB-212ENST00000484841 I3L3M4 83 aa12.87□□□□□ -0.35
ACTB-212ENST00000484841 FGF6P10767 208 aa12.87□□□□□ -0.35
ACTB-212ENST00000484841 CIRBPQ14011 172 aaKnown RBP12.87□□□□□ -0.35
ACTB-212ENST00000484841 ALKAL2Q6UX46 152 aa12.87□□□□□ -0.35
ACTB-212ENST00000484841 CHCHD10Q8WYQ3 142 aaPredicted RBP12.87□□□□□ -0.35
ACTB-212ENST00000484841 ZNF25P17030 456 aaPredicted RBP12.86□□□□□ -0.35
ACTB-212ENST00000484841 RPS10P46783 165 aaKnown RBP12.86□□□□□ -0.35
ACTB-212ENST00000484841 FOXA3P55318 350 aaPredicted RBP12.86□□□□□ -0.35
ACTB-212ENST00000484841 HIGD2BQ4VC39 106 aa12.86□□□□□ -0.35
ACTB-212ENST00000484841 A0A087WYN8 130 aa12.85□□□□□ -0.35
ACTB-212ENST00000484841 SLPIP03973 132 aa12.85□□□□□ -0.35
ACTB-212ENST00000484841 CHTF8P0CG12 524 aa12.85□□□□□ -0.35
ACTB-212ENST00000484841 C15orf56Q8N910 161 aa12.85□□□□□ -0.35
ACTB-212ENST00000484841 EIF5A2Q9GZV4 153 aaKnown RBP12.85□□□□□ -0.35
ACTB-212ENST00000484841 ST20Q9HBF5 79 aa12.85□□□□□ -0.35
ACTB-212ENST00000484841 CT83Q5H943 113 aa12.84□□□□□ -0.35
ACTB-212ENST00000484841 SPACA4Q8TDM5 124 aa12.84□□□□□ -0.35
ACTB-212ENST00000484841 C7orf33Q8WU49 177 aa12.84□□□□□ -0.35
ACTB-212ENST00000484841 HNRNPA3P51991 378 aaKnown RBP12.83□□□□□ -0.36
ACTB-212ENST00000484841 COX6A2Q02221 97 aa12.83□□□□□ -0.36
ACTB-212ENST00000484841 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.36
ACTB-212ENST00000484841 PLA2G2DQ9UNK4 145 aa12.83□□□□□ -0.36
ACTB-212ENST00000484841 NDUFS6O75380 124 aaKnown RBP12.82□□□□□ -0.36
ACTB-212ENST00000484841 Q6ZRU5 148 aa12.82□□□□□ -0.36
ACTB-212ENST00000484841 MRAP2Q96G30 205 aa12.82□□□□□ -0.36
ACTB-212ENST00000484841 FAM210AQ96ND0 272 aa12.82□□□□□ -0.36
ACTB-212ENST00000484841 SMIM7Q9BQ49 75 aa12.82□□□□□ -0.36
ACTB-212ENST00000484841 TRBV6-5A0A0K0K1A5 114 aa12.81□□□□□ -0.36
ACTB-212ENST00000484841 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
ACTB-212ENST00000484841 MAJINQ3KP22 176 aa12.81□□□□□ -0.36
ACTB-212ENST00000484841 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
ACTB-212ENST00000484841 hCG_2014768A0A024R1R8 64 aa12.8□□□□□ -0.36
ACTB-212ENST00000484841 IGKV2-24A0A0C4DH68 120 aa12.8□□□□□ -0.36
ACTB-212ENST00000484841 ZNF727A8MUV8 499 aa12.8□□□□□ -0.36
ACTB-212ENST00000484841 XCL1P47992 114 aa12.8□□□□□ -0.36
ACTB-212ENST00000484841 SS18Q15532 418 aa12.8□□□□□ -0.36
ACTB-212ENST00000484841 TSKUQ8WUA8 353 aa12.8□□□□□ -0.36
ACTB-212ENST00000484841 GVQW2A0A096LPI5 108 aaPredicted RBP12.79□□□□□ -0.36
ACTB-212ENST00000484841 HIGD1CA8MV81 97 aa12.79□□□□□ -0.36
ACTB-212ENST00000484841 LYPD6BQ8NI32 183 aa12.79□□□□□ -0.36
ACTB-212ENST00000484841 TMEM191AQ9H0A3 160 aa12.79□□□□□ -0.36
ACTB-212ENST00000484841 TMEM242Q9NWH2 141 aa12.79□□□□□ -0.36
ACTB-212ENST00000484841 PLAC8Q9NZF1 115 aa12.79□□□□□ -0.36
ACTB-212ENST00000484841 FOXI1Q12951 378 aa12.78□□□□□ -0.36
ACTB-212ENST00000484841 LINC01551Q86U37 167 aa12.78□□□□□ -0.36
ACTB-212ENST00000484841 IGHV1-58A0A0C4DH39 117 aa12.77□□□□□ -0.37
ACTB-212ENST00000484841 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
ACTB-212ENST00000484841 FAM231BA6NCW3 169 aa12.77□□□□□ -0.37
ACTB-212ENST00000484841 CCL25O15444 150 aa12.77□□□□□ -0.37
ACTB-212ENST00000484841 RIGQ13278 110 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms