RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 TRANK1O15050 2925 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 TRAV22A0A0B4J277 110 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 C2orf70A6NJV1 201 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 A8MUU9 505 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 IQCF6A8MYZ5 107 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 ERC2-IT1O76042 136 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 ZNF22P17026 224 aaPredicted RBP2.31□□□□□ -2.04
FXN-204ENST00000484259 HMGA1P17096 107 aaKnown RBP2.31□□□□□ -2.04
FXN-204ENST00000484259 TMEM105Q8N8V8 129 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 SPANXA2-OT1Q8N9U9 137 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 FAM103A1Q9BTL3 118 aaKnown RBP2.31□□□□□ -2.04
FXN-204ENST00000484259 C22orf24Q9Y442 160 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 POLEQ07864 2286 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 MUC6Q6W4X9 2439 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 NOTCH4Q99466 2003 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 FER1L5A0AVI2 2057 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 RIF1Q5UIP0 2472 aaKnown RBP2.3□□□□□ -2.04
FXN-204ENST00000484259 IGKV1D-42A0A075B6H8 117 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 IGLV3-32A0A0A0MS00 114 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 A0A1B0GUV1 79 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 SDHAF1A6NFY7 115 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 F8WEM9 126 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 IFI27P40305 119 aaPredicted RBP2.3□□□□□ -2.04
FXN-204ENST00000484259 TSC2P49815 1807 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 PTPRDP23468 1912 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 GREB1Q4ZG55 1949 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 CACNA1IQ9P0X4 2223 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 ZNF318Q5VUA4 2279 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 CHD9Q3L8U1 2897 aa2.3□□□□□ -2.04
FXN-204ENST00000484259 FAM186AA6NE01 2351 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 IGHV1-18A0A0C4DH31 117 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 A0A1W2PPR1 153 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 TMEM30CPA0ZSE6 113 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 C11orf86A6NJI1 115 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 TMEM14DPA8MWL7 114 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 HCRTO43612 131 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 IGHV3-53P01767 116 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 DEFA4P12838 97 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 MRPS21P82921 87 aaKnown RBP2.29□□□□□ -2.04
FXN-204ENST00000484259 Q5VV11 94 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 C2orf82Q6UX34 121 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 C9orf47Q6ZRZ4 202 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 ZCCHC23Q6ZST2 131 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 IMMP1LQ96LU5 166 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 C20orf166-AS1Q96NR2 134 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 NMES1Q9C002 83 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 CCL26Q9Y258 94 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 MYO18AQ92614 2054 aaKnown RBP2.29□□□□□ -2.04
FXN-204ENST00000484259 SZT2Q5T011 3432 aa2.29□□□□□ -2.04
FXN-204ENST00000484259 EP300Q09472 2414 aaPredicted RBP2.28□□□□□ -2.04
FXN-204ENST00000484259 TRAV10A0A0B4J240 114 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 CHKB-CPT1BH3BT56 60 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 H3BVH4 76 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 PANO1I0J062 215 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 MOBPQ13875 183 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 ATXN8Q156A1 80 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 C10orf128Q5T292 105 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.28□□□□□ -2.04
FXN-204ENST00000484259 CLECL1Q8IZS7 167 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 SMIM4Q8WVI0 70 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 LITAFQ99732 161 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 BPESC1Q9GZL8 116 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 CHD7Q9P2D1 2997 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 S4R3C0 116 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 ATG2BQ96BY7 2078 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 MYOFQ9NZM1 2061 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 MYO16Q9Y6X6 1858 aa2.28□□□□□ -2.04
FXN-204ENST00000484259 GON4LQ3T8J9 2241 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 SPAG17Q6Q759 2223 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 DSCAMO60469 2012 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 KIAA1549LQ6ZVL6 1849 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 IGHV3-64A0A075B6Q5 118 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 TRAV12-3A0A0B4J271 114 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 CXorf51AA0A1B0GTR3 108 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 FAM223BA6NKX1 122 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 IGKV3-11P04433 115 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 PRB4P10163 310 aaPredicted RBP2.27□□□□□ -2.05
FXN-204ENST00000484259 MDKP21741 143 aaPredicted RBP2.27□□□□□ -2.05
FXN-204ENST00000484259 IGLV3-21P80748 117 aaPredicted RBP2.27□□□□□ -2.05
FXN-204ENST00000484259 Q6ZR54 194 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 DEFB106AQ8N104 65 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 PPP1R1CQ8WVI7 109 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 CDC42SE2Q9NRR3 84 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 MUC22E2RYF6 1773 aaPredicted RBP2.27□□□□□ -2.05
FXN-204ENST00000484259 SDK1Q7Z5N4 2213 aa2.27□□□□□ -2.05
FXN-204ENST00000484259 ZFHX2Q9C0A1 2572 aaPredicted RBP2.26□□□□□ -2.05
FXN-204ENST00000484259 IGLV3-16A0A075B6K0 115 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 TRBV10-1A0A0K0K1A3 114 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 LOC101927531A0A1B0GV80 90 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 LEPROTL1O95214 131 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 IGLV2-11P01706 119 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 PRH1P02810 166 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 GIG44P09565 113 aaPredicted RBP2.26□□□□□ -2.05
FXN-204ENST00000484259 CISD3P0C7P0 127 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 SAA2P0DJI9 122 aaPredicted RBP2.26□□□□□ -2.05
FXN-204ENST00000484259 UBE2D1P51668 147 aa2.26□□□□□ -2.05
FXN-204ENST00000484259 ELOF1P60002 83 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms