RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 RNASEKQ6P5S7 137 aaKnown RBP13.73□□□□□ -0.21
TRAPPC12-220ENST00000482645 Q8N8P6 123 aa13.73□□□□□ -0.21
TRAPPC12-220ENST00000482645 PRSS47A8MTI9 375 aa13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 I3L3M4 83 aa13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 VCYO14598 125 aa13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 RPL32P62910 135 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 Q0VG73 95 aa13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 FA2HQ7L5A8 372 aa13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 GTSF1LQ9H1H1 148 aa13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 NXT2Q9NPJ8 142 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
TRAPPC12-220ENST00000482645 IGLV2-18A0A075B6J9 118 aa13.71□□□□□ -0.21
TRAPPC12-220ENST00000482645 TRBV27A0A0K0K1C4 114 aa13.71□□□□□ -0.21
TRAPPC12-220ENST00000482645 LCE6AA0A183 80 aa13.71□□□□□ -0.21
TRAPPC12-220ENST00000482645 KIR2DL4Q99706 377 aa13.71□□□□□ -0.21
TRAPPC12-220ENST00000482645 TCAPO15273 167 aa13.7□□□□□ -0.22
TRAPPC12-220ENST00000482645 FCER1GP30273 86 aa13.7□□□□□ -0.22
TRAPPC12-220ENST00000482645 TSHBP01222 138 aa13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 NDUFA6P56556 154 aa13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 URB1-AS1Q96HZ7 61 aa13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 MRPS16Q9Y3D3 137 aaKnown RBP13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 KMT2AQ03164 3969 aa13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 SERF1AO75920 110 aa13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 COTL1Q14019 142 aa13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 NIT1Q86X76 327 aa13.69□□□□□ -0.22
TRAPPC12-220ENST00000482645 LINC00614P0C842 121 aa13.67□□□□□ -0.22
TRAPPC12-220ENST00000482645 LINC00310P59036 64 aa13.67□□□□□ -0.22
TRAPPC12-220ENST00000482645 AP5S1Q9NUS5 200 aa13.67□□□□□ -0.22
TRAPPC12-220ENST00000482645 HYDINQ4G0P3 5121 aa13.67□□□□□ -0.22
TRAPPC12-220ENST00000482645 S100A6P06703 90 aa13.65□□□□□ -0.22
TRAPPC12-220ENST00000482645 AMTP48728 403 aa13.65□□□□□ -0.22
TRAPPC12-220ENST00000482645 TIRAPP58753 221 aa13.65□□□□□ -0.22
TRAPPC12-220ENST00000482645 LAGE3Q14657 143 aa13.65□□□□□ -0.22
TRAPPC12-220ENST00000482645 LELP1Q5T871 98 aa13.65□□□□□ -0.22
TRAPPC12-220ENST00000482645 WFDC10BQ8IUB3 73 aa13.65□□□□□ -0.22
TRAPPC12-220ENST00000482645 CHCHD1Q96BP2 118 aaKnown RBP13.65□□□□□ -0.22
TRAPPC12-220ENST00000482645 PMCHL1Q16048 86 aa13.64□□□□□ -0.23
TRAPPC12-220ENST00000482645 ORMDL2Q53FV1 153 aa13.64□□□□□ -0.23
TRAPPC12-220ENST00000482645 UPK3BQ9BT76 320 aa13.64□□□□□ -0.23
TRAPPC12-220ENST00000482645 TRAV8-6A0A0B4J262 113 aa13.64□□□□□ -0.23
TRAPPC12-220ENST00000482645 HSBP1O75506 76 aa13.64□□□□□ -0.23
TRAPPC12-220ENST00000482645 NTM-AS1Q6ZSK4 140 aa13.64□□□□□ -0.23
TRAPPC12-220ENST00000482645 Q9H8V8 135 aa13.64□□□□□ -0.23
TRAPPC12-220ENST00000482645 LINC01546A6NGU7 62 aa13.63□□□□□ -0.23
TRAPPC12-220ENST00000482645 K7EMI3 77 aa13.63□□□□□ -0.23
TRAPPC12-220ENST00000482645 NUPR1O60356 82 aa13.63□□□□□ -0.23
TRAPPC12-220ENST00000482645 TRBV25-1A0A075B6N4 114 aa13.62□□□□□ -0.23
TRAPPC12-220ENST00000482645 TRBV6-8A0A0A6YYG3 113 aa13.62□□□□□ -0.23
TRAPPC12-220ENST00000482645 IGHV1-24A0A0C4DH33 117 aa13.62□□□□□ -0.23
TRAPPC12-220ENST00000482645 M0R2N4 97 aa13.62□□□□□ -0.23
TRAPPC12-220ENST00000482645 SIVA1O15304 175 aa13.62□□□□□ -0.23
TRAPPC12-220ENST00000482645 TMEM97Q5BJF2 176 aa13.62□□□□□ -0.23
TRAPPC12-220ENST00000482645 COA6Q5JTJ3 125 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-220ENST00000482645 DNAH6Q9C0G6 4158 aa13.61□□□□□ -0.23
TRAPPC12-220ENST00000482645 BTF3P20290 206 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-220ENST00000482645 PDZD11Q5EBL8 140 aa13.61□□□□□ -0.23
TRAPPC12-220ENST00000482645 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
TRAPPC12-220ENST00000482645 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-220ENST00000482645 IGKV2-29A2NJV5 120 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-220ENST00000482645 FAM19A2Q8N3H0 131 aa13.6□□□□□ -0.23
TRAPPC12-220ENST00000482645 TMEM243Q9BU79 118 aa13.59□□□□□ -0.23
TRAPPC12-220ENST00000482645 RYR2Q92736 4967 aa13.59□□□□□ -0.23
TRAPPC12-220ENST00000482645 CHCHD5Q9BSY4 110 aa13.59□□□□□ -0.23
TRAPPC12-220ENST00000482645 A0A096LNJ9 63 aa13.58□□□□□ -0.24
TRAPPC12-220ENST00000482645 UBE2L6O14933 153 aa13.58□□□□□ -0.24
TRAPPC12-220ENST00000482645 HBDP02042 147 aa13.58□□□□□ -0.24
TRAPPC12-220ENST00000482645 SNRPEP62304 92 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-220ENST00000482645 RPL39P62891 51 aaKnown RBP13.58□□□□□ -0.24
TRAPPC12-220ENST00000482645 C2orf66Q6UXQ4 117 aa13.58□□□□□ -0.24
TRAPPC12-220ENST00000482645 C20orf203Q8NBC4 194 aa13.58□□□□□ -0.24
TRAPPC12-220ENST00000482645 TMEM262E9PQX1 116 aa13.57□□□□□ -0.24
TRAPPC12-220ENST00000482645 IGHV3-30P01768 117 aa13.57□□□□□ -0.24
TRAPPC12-220ENST00000482645 IGHV3-33P01772 117 aa13.57□□□□□ -0.24
TRAPPC12-220ENST00000482645 IGHV3-30-3P0DP02 117 aa13.57□□□□□ -0.24
TRAPPC12-220ENST00000482645 IGHV3-30-5P0DP03 117 aa13.57□□□□□ -0.24
TRAPPC12-220ENST00000482645 ESDP10768 282 aa13.57□□□□□ -0.24
TRAPPC12-220ENST00000482645 Q8N3U1 123 aa13.56□□□□□ -0.24
TRAPPC12-220ENST00000482645 CYSLTR1Q9Y271 337 aa13.56□□□□□ -0.24
TRAPPC12-220ENST00000482645 NBDYA0A0U1RRE5 68 aa13.55□□□□□ -0.24
TRAPPC12-220ENST00000482645 GAGE6Q13070 117 aa13.55□□□□□ -0.24
TRAPPC12-220ENST00000482645 DNAH10OSP0CZ25 163 aa13.54□□□□□ -0.24
TRAPPC12-220ENST00000482645 TMEM18Q96B42 140 aa13.54□□□□□ -0.24
TRAPPC12-220ENST00000482645 A0A087WX48 190 aa13.54□□□□□ -0.24
TRAPPC12-220ENST00000482645 C5orf52A6NGY3 159 aa13.54□□□□□ -0.24
TRAPPC12-220ENST00000482645 HIST3H2BBQ8N257 126 aa13.54□□□□□ -0.24
TRAPPC12-220ENST00000482645 TOMM6Q96B49 74 aa13.54□□□□□ -0.24
TRAPPC12-220ENST00000482645 RYR3Q15413 4870 aa13.53□□□□□ -0.24
TRAPPC12-220ENST00000482645 G0S2P27469 103 aa13.53□□□□□ -0.24
TRAPPC12-220ENST00000482645 S100A2P29034 98 aa13.53□□□□□ -0.24
TRAPPC12-220ENST00000482645 TTC32Q5I0X7 151 aa13.53□□□□□ -0.24
TRAPPC12-220ENST00000482645 LINC01556Q5JQF7 62 aa13.53□□□□□ -0.24
TRAPPC12-220ENST00000482645 KRTAP1-5Q9BYS1 174 aa13.53□□□□□ -0.24
TRAPPC12-220ENST00000482645 AMMECR1LQ6DCA0 310 aa13.52□□□□□ -0.25
TRAPPC12-220ENST00000482645 UBE2D4Q9Y2X8 147 aa13.52□□□□□ -0.25
TRAPPC12-220ENST00000482645 TRAV9-2A0A087WT02 112 aa13.51□□□□□ -0.25
TRAPPC12-220ENST00000482645 FGF6P10767 208 aa13.51□□□□□ -0.25
TRAPPC12-220ENST00000482645 MPV17L2Q567V2 206 aa13.51□□□□□ -0.25
TRAPPC12-220ENST00000482645 H7C423 109 aa13.5□□□□□ -0.25
TRAPPC12-220ENST00000482645 FABP4P15090 132 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms