RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 RPL39LQ96EH5 51 aaKnown RBP8.59□□□□□ -1.03
HDAC1-207ENST00000481281 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
HDAC1-207ENST00000481281 C1orf43Q9BWL3 253 aa8.59□□□□□ -1.03
HDAC1-207ENST00000481281 COTL1Q14019 142 aa8.58□□□□□ -1.04
HDAC1-207ENST00000481281 ADIRFQ15847 76 aa8.58□□□□□ -1.04
HDAC1-207ENST00000481281 TMEM191AQ9H0A3 160 aa8.58□□□□□ -1.04
HDAC1-207ENST00000481281 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
HDAC1-207ENST00000481281 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
HDAC1-207ENST00000481281 AMTP48728 403 aa8.57□□□□□ -1.04
HDAC1-207ENST00000481281 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
HDAC1-207ENST00000481281 NUP35Q8NFH5 326 aa8.57□□□□□ -1.04
HDAC1-207ENST00000481281 TMEM70Q9BUB7 260 aa8.57□□□□□ -1.04
HDAC1-207ENST00000481281 NCR2O95944 276 aa8.56□□□□□ -1.04
HDAC1-207ENST00000481281 KRTAP26-1Q6PEX3 210 aa8.56□□□□□ -1.04
HDAC1-207ENST00000481281 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
HDAC1-207ENST00000481281 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
HDAC1-207ENST00000481281 DEFB104AQ8WTQ1 72 aa8.56□□□□□ -1.04
HDAC1-207ENST00000481281 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
HDAC1-207ENST00000481281 NAT8BQ9UHF3 227 aa8.56□□□□□ -1.04
HDAC1-207ENST00000481281 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
HDAC1-207ENST00000481281 IGLV4-60A0A075B6I1 120 aa8.55□□□□□ -1.04
HDAC1-207ENST00000481281 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.55□□□□□ -1.04
HDAC1-207ENST00000481281 SMIM27A0A1W2PRY6 76 aa8.55□□□□□ -1.04
HDAC1-207ENST00000481281 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
HDAC1-207ENST00000481281 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
HDAC1-207ENST00000481281 RAB4AP20338 218 aa8.55□□□□□ -1.04
HDAC1-207ENST00000481281 REG3AQ06141 175 aa8.55□□□□□ -1.04
HDAC1-207ENST00000481281 UBE2L6O14933 153 aa8.54□□□□□ -1.04
HDAC1-207ENST00000481281 RIGQ13278 110 aa8.54□□□□□ -1.04
HDAC1-207ENST00000481281 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
HDAC1-207ENST00000481281 MRAP2Q96G30 205 aa8.54□□□□□ -1.04
HDAC1-207ENST00000481281 HLA-DQA1P01909 254 aa8.53□□□□□ -1.04
HDAC1-207ENST00000481281 APCSP02743 223 aa8.53□□□□□ -1.04
HDAC1-207ENST00000481281 RPS10P46783 165 aaKnown RBP8.53□□□□□ -1.04
HDAC1-207ENST00000481281 C14orf177Q52M58 125 aa8.53□□□□□ -1.04
HDAC1-207ENST00000481281 Q6ZSA8 131 aa8.53□□□□□ -1.04
HDAC1-207ENST00000481281 TRAV8-4A0A0B4J246 113 aa8.52□□□□□ -1.05
HDAC1-207ENST00000481281 USP17L23D6RBM5 183 aa8.52□□□□□ -1.05
HDAC1-207ENST00000481281 H7C423 109 aa8.52□□□□□ -1.05
HDAC1-207ENST00000481281 I3L3M4 83 aa8.52□□□□□ -1.05
HDAC1-207ENST00000481281 ST20Q9HBF5 79 aa8.52□□□□□ -1.05
HDAC1-207ENST00000481281 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.05
HDAC1-207ENST00000481281 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
HDAC1-207ENST00000481281 TSHBP01222 138 aa8.51□□□□□ -1.05
HDAC1-207ENST00000481281 POLR2KP53803 58 aaKnown RBP8.51□□□□□ -1.05
HDAC1-207ENST00000481281 RAB14P61106 215 aa8.51□□□□□ -1.05
HDAC1-207ENST00000481281 LCE2DQ5TA82 110 aaPredicted RBP8.51□□□□□ -1.05
HDAC1-207ENST00000481281 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
HDAC1-207ENST00000481281 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
HDAC1-207ENST00000481281 A0A1B0GW15 77 aa8.5□□□□□ -1.05
HDAC1-207ENST00000481281 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
HDAC1-207ENST00000481281 EPM2AB3EWF7 344 aa8.5□□□□□ -1.05
HDAC1-207ENST00000481281 ESDP10768 282 aa8.5□□□□□ -1.05
HDAC1-207ENST00000481281 PMCHP20382 165 aa8.5□□□□□ -1.05
HDAC1-207ENST00000481281 HAMPP81172 84 aa8.5□□□□□ -1.05
HDAC1-207ENST00000481281 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
HDAC1-207ENST00000481281 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
HDAC1-207ENST00000481281 FGF6P10767 208 aa8.49□□□□□ -1.05
HDAC1-207ENST00000481281 CLLU1Q5K131 121 aa8.49□□□□□ -1.05
HDAC1-207ENST00000481281 FAM104BQ5XKR9 115 aa8.49□□□□□ -1.05
HDAC1-207ENST00000481281 AMMECR1LQ6DCA0 310 aa8.49□□□□□ -1.05
HDAC1-207ENST00000481281 NRACQ8N912 160 aa8.49□□□□□ -1.05
HDAC1-207ENST00000481281 TMEM242Q9NWH2 141 aa8.49□□□□□ -1.05
HDAC1-207ENST00000481281 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
HDAC1-207ENST00000481281 PPP1R17O96001 155 aa8.48□□□□□ -1.05
HDAC1-207ENST00000481281 PRSS1P07477 247 aa8.48□□□□□ -1.05
HDAC1-207ENST00000481281 ZNF25P17030 456 aaPredicted RBP8.48□□□□□ -1.05
HDAC1-207ENST00000481281 CAMPP49913 170 aa8.48□□□□□ -1.05
HDAC1-207ENST00000481281 PNRC1Q12796 327 aaPredicted RBP8.48□□□□□ -1.05
HDAC1-207ENST00000481281 MRPL51Q4U2R6 128 aaKnown RBP8.48□□□□□ -1.05
HDAC1-207ENST00000481281 Q5VSD8 79 aa8.48□□□□□ -1.05
HDAC1-207ENST00000481281 SMR3BP02814 79 aaPredicted RBP8.47□□□□□ -1.05
HDAC1-207ENST00000481281 S100A8P05109 93 aa8.47□□□□□ -1.05
HDAC1-207ENST00000481281 SUMO2P61956 95 aaKnown RBP8.47□□□□□ -1.05
HDAC1-207ENST00000481281 MRPL54Q6P161 138 aaKnown RBP8.47□□□□□ -1.05
HDAC1-207ENST00000481281 RNASEKQ6P5S7 137 aaKnown RBP8.47□□□□□ -1.05
HDAC1-207ENST00000481281 LINC00862A6NCI5 91 aa8.46□□□□□ -1.06
HDAC1-207ENST00000481281 VCYO14598 125 aa8.46□□□□□ -1.06
HDAC1-207ENST00000481281 PPP1R2P9O14990 202 aa8.46□□□□□ -1.06
HDAC1-207ENST00000481281 HBBP68871 147 aa8.46□□□□□ -1.06
HDAC1-207ENST00000481281 DGAT2L7PQ6IED9 249 aa8.46□□□□□ -1.06
HDAC1-207ENST00000481281 MRPL52Q86TS9 123 aaKnown RBP8.46□□□□□ -1.06
HDAC1-207ENST00000481281 CLRN3Q8NCR9 226 aa8.46□□□□□ -1.06
HDAC1-207ENST00000481281 TRBV24-1A0A075B6N3 115 aa8.45□□□□□ -1.06
HDAC1-207ENST00000481281 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
HDAC1-207ENST00000481281 IFITM2Q01629 132 aa8.45□□□□□ -1.06
HDAC1-207ENST00000481281 ATP5L2Q7Z4Y8 100 aa8.45□□□□□ -1.06
HDAC1-207ENST00000481281 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
HDAC1-207ENST00000481281 F8W036 122 aa8.44□□□□□ -1.06
HDAC1-207ENST00000481281 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
HDAC1-207ENST00000481281 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
HDAC1-207ENST00000481281 C9orf163Q8N9P6 203 aa8.44□□□□□ -1.06
HDAC1-207ENST00000481281 OR5A1Q8NGJ0 315 aa8.44□□□□□ -1.06
HDAC1-207ENST00000481281 BTF3L4Q96K17 158 aa8.44□□□□□ -1.06
HDAC1-207ENST00000481281 C20orf78Q9BR46 151 aa8.44□□□□□ -1.06
HDAC1-207ENST00000481281 DNAH8Q96JB1 4490 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 GAGE12HA6NDE8 117 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 FCER1GP30273 86 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 CKS2P33552 79 aa8.43□□□□□ -1.06
HDAC1-207ENST00000481281 CNBPP62633 177 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms