RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 IFITM3Q01628 133 aa9.92□□□□□ -0.82
DDX56-210ENST00000479440 BAGE2Q86Y30 109 aa9.92□□□□□ -0.82
DDX56-210ENST00000479440 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
DDX56-210ENST00000479440 CARD19Q96LW7 228 aa9.92□□□□□ -0.82
DDX56-210ENST00000479440 MLST8Q9BVC4 326 aa9.92□□□□□ -0.82
DDX56-210ENST00000479440 TPPP3Q9BW30 176 aa9.92□□□□□ -0.82
DDX56-210ENST00000479440 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
DDX56-210ENST00000479440 PFDN1O60925 122 aa9.9□□□□□ -0.82
DDX56-210ENST00000479440 AMMECR1LQ6DCA0 310 aa9.9□□□□□ -0.82
DDX56-210ENST00000479440 NIT2Q9NQR4 276 aa9.9□□□□□ -0.82
DDX56-210ENST00000479440 PSORS1C2Q9UIG4 136 aa9.9□□□□□ -0.82
DDX56-210ENST00000479440 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
DDX56-210ENST00000479440 PAGE4O60829 102 aa9.89□□□□□ -0.83
DDX56-210ENST00000479440 CACNG7P62955 275 aa9.89□□□□□ -0.83
DDX56-210ENST00000479440 FER1L6-AS1Q8NA97 138 aa9.89□□□□□ -0.83
DDX56-210ENST00000479440 TRGC1P0CF51 173 aa9.88□□□□□ -0.83
DDX56-210ENST00000479440 FOXI1Q12951 378 aa9.88□□□□□ -0.83
DDX56-210ENST00000479440 MUC2Q02817 5179 aa9.87□□□□□ -0.83
DDX56-210ENST00000479440 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
DDX56-210ENST00000479440 RPS20P60866 119 aaKnown RBP9.87□□□□□ -0.83
DDX56-210ENST00000479440 ALG5Q9Y673 324 aa9.87□□□□□ -0.83
DDX56-210ENST00000479440 MT-ND6P03923 174 aa9.86□□□□□ -0.83
DDX56-210ENST00000479440 IGLC6P0CF74 106 aa9.86□□□□□ -0.83
DDX56-210ENST00000479440 RNASEKQ6P5S7 137 aaKnown RBP9.86□□□□□ -0.83
DDX56-210ENST00000479440 FXYD6-FXYD2A0A087WZ82 144 aa9.85□□□□□ -0.83
DDX56-210ENST00000479440 H7C423 109 aa9.85□□□□□ -0.83
DDX56-210ENST00000479440 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
DDX56-210ENST00000479440 ZNF561-AS1K7EIQ3 104 aa9.84□□□□□ -0.83
DDX56-210ENST00000479440 NCR2O95944 276 aa9.84□□□□□ -0.83
DDX56-210ENST00000479440 XCL1P47992 114 aa9.84□□□□□ -0.83
DDX56-210ENST00000479440 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
DDX56-210ENST00000479440 OR5A1Q8NGJ0 315 aa9.84□□□□□ -0.83
DDX56-210ENST00000479440 ISOC2Q96AB3 205 aa9.84□□□□□ -0.83
DDX56-210ENST00000479440 LOC107984640A0A0U1RRK4 108 aa9.83□□□□□ -0.84
DDX56-210ENST00000479440 XKRY2A2RUG3 117 aa9.83□□□□□ -0.84
DDX56-210ENST00000479440 F2Z2F3 143 aa9.83□□□□□ -0.84
DDX56-210ENST00000479440 APCSP02743 223 aa9.83□□□□□ -0.84
DDX56-210ENST00000479440 GIPP09681 153 aaPredicted RBP9.83□□□□□ -0.84
DDX56-210ENST00000479440 ZNF25P17030 456 aaPredicted RBP9.83□□□□□ -0.84
DDX56-210ENST00000479440 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
DDX56-210ENST00000479440 OR2D3Q8NGH3 330 aa9.83□□□□□ -0.84
DDX56-210ENST00000479440 LINC00526Q96FQ7 95 aa9.83□□□□□ -0.84
DDX56-210ENST00000479440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.82□□□□□ -0.84
DDX56-210ENST00000479440 IGKV2-29A2NJV5 120 aaPredicted RBP9.82□□□□□ -0.84
DDX56-210ENST00000479440 CCL25O15444 150 aa9.82□□□□□ -0.84
DDX56-210ENST00000479440 FGF6P10767 208 aa9.82□□□□□ -0.84
DDX56-210ENST00000479440 NTF3P20783 257 aa9.82□□□□□ -0.84
DDX56-210ENST00000479440 Q5BKY6 102 aa9.82□□□□□ -0.84
DDX56-210ENST00000479440 C1orf137Q5JT78 98 aa9.82□□□□□ -0.84
DDX56-210ENST00000479440 PRR26Q8N8Z3 221 aa9.82□□□□□ -0.84
DDX56-210ENST00000479440 KRTAP9-6A0A140TA67 174 aa9.81□□□□□ -0.84
DDX56-210ENST00000479440 RPL35P42766 123 aaKnown RBP9.81□□□□□ -0.84
DDX56-210ENST00000479440 CAMPP49913 170 aa9.81□□□□□ -0.84
DDX56-210ENST00000479440 Q6ZNX1 250 aa9.81□□□□□ -0.84
DDX56-210ENST00000479440 TMUB2Q71RG4 321 aa9.81□□□□□ -0.84
DDX56-210ENST00000479440 DIRC1Q969H9 104 aa9.81□□□□□ -0.84
DDX56-210ENST00000479440 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
DDX56-210ENST00000479440 BTF3L4Q96K17 158 aa9.81□□□□□ -0.84
DDX56-210ENST00000479440 LINC00959A0A1B0GUT2 108 aa9.79□□□□□ -0.84
DDX56-210ENST00000479440 A0A1B0GV50 99 aa9.79□□□□□ -0.84
DDX56-210ENST00000479440 A0A1W2PNN7 141 aa9.79□□□□□ -0.84
DDX56-210ENST00000479440 PRR4Q16378 134 aa9.79□□□□□ -0.84
DDX56-210ENST00000479440 SFT2D1Q8WV19 159 aa9.79□□□□□ -0.84
DDX56-210ENST00000479440 EIF5AP63241 154 aaKnown RBP9.78□□□□□ -0.84
DDX56-210ENST00000479440 SS18Q15532 418 aa9.78□□□□□ -0.84
DDX56-210ENST00000479440 C9orf116Q5BN46 136 aaPredicted RBP9.78□□□□□ -0.84
DDX56-210ENST00000479440 CENPWQ5EE01 88 aa9.78□□□□□ -0.84
DDX56-210ENST00000479440 EIF5AL1Q6IS14 154 aaKnown RBP9.78□□□□□ -0.84
DDX56-210ENST00000479440 LYZL1Q6UWQ5 148 aa9.78□□□□□ -0.84
DDX56-210ENST00000479440 KCNRGQ8N5I3 272 aa9.78□□□□□ -0.84
DDX56-210ENST00000479440 GATD1Q8NB37 220 aa9.78□□□□□ -0.84
DDX56-210ENST00000479440 FAM213BQ8TBF2 198 aa9.78□□□□□ -0.84
DDX56-210ENST00000479440 IGLV4-69A0A075B6H9 119 aa9.77□□□□□ -0.85
DDX56-210ENST00000479440 IGLV1-50A0A075B6I6 118 aa9.77□□□□□ -0.85
DDX56-210ENST00000479440 C19orf71A6NCJ1 209 aa9.77□□□□□ -0.85
DDX56-210ENST00000479440 APOMO95445 188 aa9.77□□□□□ -0.85
DDX56-210ENST00000479440 IFNA1P01562 189 aa9.77□□□□□ -0.85
DDX56-210ENST00000479440 BCL2P10415 239 aa9.77□□□□□ -0.85
DDX56-210ENST00000479440 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
DDX56-210ENST00000479440 H0Y9J4 135 aa9.76□□□□□ -0.85
DDX56-210ENST00000479440 IGLV7-43P04211 117 aa9.76□□□□□ -0.85
DDX56-210ENST00000479440 CD164L2Q6UWJ8 174 aa9.76□□□□□ -0.85
DDX56-210ENST00000479440 C11orf52Q96A22 123 aa9.76□□□□□ -0.85
DDX56-210ENST00000479440 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
DDX56-210ENST00000479440 CYTL1Q9NRR1 136 aa9.76□□□□□ -0.85
DDX56-210ENST00000479440 UMAD1C9J7I0 102 aa9.75□□□□□ -0.85
DDX56-210ENST00000479440 CTRLP40313 264 aa9.75□□□□□ -0.85
DDX56-210ENST00000479440 UBE2D1P51668 147 aa9.75□□□□□ -0.85
DDX56-210ENST00000479440 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
DDX56-210ENST00000479440 TWIST1Q15672 202 aa9.75□□□□□ -0.85
DDX56-210ENST00000479440 PHF5AQ7RTV0 110 aaKnown RBP9.75□□□□□ -0.85
DDX56-210ENST00000479440 TSKUQ8WUA8 353 aa9.75□□□□□ -0.85
DDX56-210ENST00000479440 CAMK2N2Q96S95 79 aa9.75□□□□□ -0.85
DDX56-210ENST00000479440 FAT4Q6V0I7 4981 aa9.75□□□□□ -0.85
DDX56-210ENST00000479440 MALP21145 153 aa9.74□□□□□ -0.85
DDX56-210ENST00000479440 NUP35Q8NFH5 326 aa9.74□□□□□ -0.85
DDX56-210ENST00000479440 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
DDX56-210ENST00000479440 SDHAF1A6NFY7 115 aa9.73□□□□□ -0.85
DDX56-210ENST00000479440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
DDX56-210ENST00000479440 ARPC5O15511 151 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms