RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, human

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC6-208	ENST00000478914	IGLV10-54	A0A075B6I4	117 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914		A0A1B0GUV1	79 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914		A6NJY4	79 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	TMEM250	H0YL14	139 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	GATC	O43716	136 aa	Known RBP	5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	PRSS1	P07477	247 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	CEBPG	P53567	150 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	ALKAL2	Q6UX46	152 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914		Q6ZNX1	250 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	CLRN3	Q8NCR9	226 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	CIRBP-AS1	Q8TBR5	109 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914	BORCS7	Q96B45	105 aa		5.68	□□□□□ -1.5
XRCC6-208	ENST00000478914		A8MWL6	223 aa		5.67	□□□□□ -1.5
XRCC6-208	ENST00000478914		K7EN84	100 aa		5.67	□□□□□ -1.5
XRCC6-208	ENST00000478914	AMMECR1L	Q6DCA0	310 aa		5.67	□□□□□ -1.5
XRCC6-208	ENST00000478914	TEX261	Q6UWH6	196 aa		5.67	□□□□□ -1.5
XRCC6-208	ENST00000478914	C20orf203	Q8NBC4	194 aa		5.67	□□□□□ -1.5
XRCC6-208	ENST00000478914	CNFN	Q9BYD5	112 aa		5.67	□□□□□ -1.5
XRCC6-208	ENST00000478914	AP5S1	Q9NUS5	200 aa		5.67	□□□□□ -1.5
XRCC6-208	ENST00000478914	VPS13B	Q7Z7G8	4022 aa		5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	IGLV4-60	A0A075B6I1	120 aa		5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	TRAV26-2	A0A0B4J265	109 aa		5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	hDV102S1	A0JD36	115 aa		5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	KRTAP26-1	Q6PEX3	210 aa		5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	C9orf163	Q8N9P6	203 aa		5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	GATD1	Q8NB37	220 aa		5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	EIF5A2	Q9GZV4	153 aa	Known RBP	5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	SRRM2	Q9UQ35	2752 aa	Known RBP	5.66	□□□□□ -1.5
XRCC6-208	ENST00000478914	IGKV3OR2-268	A0A0C4DH90	116 aa		5.65	□□□□□ -1.5
XRCC6-208	ENST00000478914	NCR2	O95944	276 aa		5.65	□□□□□ -1.5
XRCC6-208	ENST00000478914	APCS	P02743	223 aa		5.65	□□□□□ -1.5
XRCC6-208	ENST00000478914	CFAP161	Q6P656	301 aa		5.65	□□□□□ -1.5
XRCC6-208	ENST00000478914	FAM231D	Q6ZW35	169 aa		5.65	□□□□□ -1.5
XRCC6-208	ENST00000478914	SMIM7	Q9BQ49	75 aa		5.65	□□□□□ -1.5
XRCC6-208	ENST00000478914	MYCBP2	O75592	4640 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	IGHV3-64	A0A075B6Q5	118 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914		H7C423	109 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	PMCH	P20382	165 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	RPL37A	P61513	92 aa	Known RBP	5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	CT83	Q5H943	113 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	RNASEK	Q6P5S7	137 aa	Known RBP	5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	GTSF1	Q8WW33	167 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	RPL39L	Q96EH5	51 aa	Known RBP	5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	DPH3	Q96FX2	82 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	GFRA4	Q9GZZ7	299 aa		5.64	□□□□□ -1.51
XRCC6-208	ENST00000478914	GAGE12H	A6NDE8	117 aa		5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	SDHAF1	A6NFY7	115 aa		5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	ZNF727	A8MUV8	499 aa		5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	CNBP	P62633	177 aa	Known RBP	5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	LYPD6B	Q8NI32	183 aa		5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	TMEM101	Q96IK0	257 aa		5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	BTF3L4	Q96K17	158 aa		5.63	□□□□□ -1.51
XRCC6-208	ENST00000478914	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914		A0A1B0GUT8	65 aa		5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	IGKV2-29	A2NJV5	120 aa	Predicted RBP	5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914		I3L3M4	83 aa		5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	NDUFS6	O75380	124 aa	Known RBP	5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	ZNF25	P17030	456 aa	Predicted RBP	5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	FOXA3	P55318	350 aa	Predicted RBP	5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	SDIM1	Q6ZPB5	146 aa		5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	TSKU	Q8WUA8	353 aa		5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	FAM210A	Q96ND0	272 aa		5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	ST20	Q9HBF5	79 aa		5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	5.62	□□□□□ -1.51
XRCC6-208	ENST00000478914	FAM231B	A6NCW3	169 aa		5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	HIGD1C	A8MV81	97 aa		5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	OXT	P01178	125 aa		5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	FGF6	P10767	208 aa		5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	LINC01551	Q86U37	167 aa		5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	MRAP2	Q96G30	205 aa		5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	OSTC	Q9NRP0	149 aa		5.61	□□□□□ -1.51
XRCC6-208	ENST00000478914	TRBV6-5	A0A0K0K1A5	114 aa		5.6	□□□□□ -1.51
XRCC6-208	ENST00000478914	KRTAP10-4	P60372	401 aa	Predicted RBP	5.6	□□□□□ -1.51
XRCC6-208	ENST00000478914	RIG	Q13278	110 aa		5.6	□□□□□ -1.51
XRCC6-208	ENST00000478914	OR5A1	Q8NGJ0	315 aa		5.6	□□□□□ -1.51
XRCC6-208	ENST00000478914	RNF185	Q96GF1	192 aa		5.6	□□□□□ -1.51
XRCC6-208	ENST00000478914	TMEM191A	Q9H0A3	160 aa		5.6	□□□□□ -1.51
XRCC6-208	ENST00000478914	PPP1R17	O96001	155 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	SRP19	P09132	144 aa	Known RBP	5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	FCER1G	P30273	86 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	RPS10	P46783	165 aa	Known RBP	5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	SMAGP	Q0VAQ4	97 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	SS18	Q15532	418 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	TMEM241	Q24JQ0	296 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	HIGD2B	Q4VC39	106 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	FAM74A3	Q4VXF1	159 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	C15orf56	Q8N910	161 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	TMEM242	Q9NWH2	141 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914	PKIG	Q9Y2B9	76 aa		5.59	□□□□□ -1.51
XRCC6-208	ENST00000478914		A0A087WYN8	130 aa		5.58	□□□□□ -1.52
XRCC6-208	ENST00000478914	C7orf77	A4D0Y5	90 aa		5.58	□□□□□ -1.52
XRCC6-208	ENST00000478914	PANO1	I0J062	215 aa		5.58	□□□□□ -1.52
XRCC6-208	ENST00000478914	TSHB	P01222	138 aa		5.58	□□□□□ -1.52
XRCC6-208	ENST00000478914	RAB4A	P20338	218 aa		5.58	□□□□□ -1.52
XRCC6-208	ENST00000478914	XCL1	P47992	114 aa		5.58	□□□□□ -1.52
XRCC6-208	ENST00000478914	CIRBP	Q14011	172 aa	Known RBP	5.58	□□□□□ -1.52
XRCC6-208	ENST00000478914	ADIRF	Q15847	76 aa		5.58	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms