RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PP6455Q8WZ26 134 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 SEC11CQ9BY50 192 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 DNAH14Q0VDD8 3507 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 PTPRDP23468 1912 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 HEATR5BQ9P2D3 2071 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 IGF2RP11717 2491 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 TRAV17A0A0B4J275 112 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 A0A1W2PRS3 328 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 COX7CP15954 63 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 SLC25A26Q70HW3 274 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 C4orf33Q8N1A6 199 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 Q8N2B8 174 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 LINC00052Q96N35 136 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 TAS2R8Q9NYW2 309 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 SDK1Q7Z5N4 2213 aa2.05□□□□□ -2.08
VPS13D-207ENST00000476169 CCDC179H3BU77 68 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 J3QKU1 62 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 SNCGO76070 127 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 PRB4P10163 310 aaPredicted RBP2.04□□□□□ -2.08
VPS13D-207ENST00000476169 ADCYAP1P18509 176 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 GNG4P50150 75 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 RP1P56715 2156 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 NUMA1Q14980 2115 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 Q6ZS92 163 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 KIAA1549LQ6ZVL6 1849 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 PLPP5Q8NEB5 264 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 DCHS1Q96JQ0 3298 aa2.04□□□□□ -2.08
VPS13D-207ENST00000476169 BOKQ9UMX3 212 aaPredicted RBP2.04□□□□□ -2.08
VPS13D-207ENST00000476169 ACACBO00763 2458 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 MYLKQ15746 1914 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 EPG5Q9HCE0 2579 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 TRGV2A0A075B6R0 118 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 IL5P05113 134 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 IL7P13232 177 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 RBP2P50120 134 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 TPPP2P59282 170 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 OR2T2Q6IF00 324 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 UNQ5815/PRO19632Q6UWF5 114 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 VSTM2AQ8TAG5 236 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 DYNLRB2Q8TF09 96 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 C14orf144Q96I85 54 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 NAA60Q9H7X0 242 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 PROK2Q9HC23 129 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 APC2O95996 2303 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 DIDO1Q9BTC0 2240 aaKnown RBP2.03□□□□□ -2.08
VPS13D-207ENST00000476169 CITO14578 2027 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 SCN3AQ9NY46 2000 aa2.03□□□□□ -2.08
VPS13D-207ENST00000476169 USP24Q9UPU5 2620 aa2.03□□□□□ -2.09
VPS13D-207ENST00000476169 WDFY4Q6ZS81 3184 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 GEMIN2O14893 280 aaKnown RBP2.02□□□□□ -2.09
VPS13D-207ENST00000476169 DNAL4O96015 105 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 POLR2JP52435 117 aaKnown RBP2.02□□□□□ -2.09
VPS13D-207ENST00000476169 PPP3R1P63098 170 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 COMMD6Q7Z4G1 85 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 SPTSSAQ969W0 71 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 MRPL57Q9BQC6 102 aaKnown RBP2.02□□□□□ -2.09
VPS13D-207ENST00000476169 TMEM106BQ9NUM4 274 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 TMEM242Q9NWH2 141 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 ZFYVE26Q68DK2 2539 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 PKD1L2Q7Z442 2459 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 CACNA1GO43497 2377 aa2.02□□□□□ -2.09
VPS13D-207ENST00000476169 TPRP12270 2363 aaKnown RBP2.01□□□□□ -2.09
VPS13D-207ENST00000476169 TRBV6-4A0A1B0GX49 114 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 PITX3O75364 302 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 LINC00032P0C843 101 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 SMIM6P0DI80 62 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 PIPP12273 146 aaPredicted RBP2.01□□□□□ -2.09
VPS13D-207ENST00000476169 KRTAP10-10P60014 251 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 IQCJQ1A5X6 159 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 RPL7L1Q6DKI1 246 aaKnown RBP2.01□□□□□ -2.09
VPS13D-207ENST00000476169 SLC48A1Q6P1K1 146 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 KRTAP26-1Q6PEX3 210 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 GTF2H5Q6ZYL4 71 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 C15orf53Q8NAA6 179 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 PPP3R2Q96LZ3 170 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 SNURFQ9Y675 71 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 KIAA1549Q9HCM3 1950 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 HELZP42694 1942 aaKnown RBP2.01□□□□□ -2.09
VPS13D-207ENST00000476169 CEP295Q9C0D2 2601 aa2.01□□□□□ -2.09
VPS13D-207ENST00000476169 COL5A1P20908 1838 aaPredicted RBP2.01□□□□□ -2.09
VPS13D-207ENST00000476169 CFAP54Q96N23 3096 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 SPEGQ15772 3267 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 TMEM30CPA0ZSE6 113 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 RNASE3P12724 160 aaKnown RBP2□□□□□ -2.09
VPS13D-207ENST00000476169 RPL38P63173 70 aaKnown RBP2□□□□□ -2.09
VPS13D-207ENST00000476169 RHOHQ15669 191 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 Q56UQ5 140 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 LCE3AQ5TA76 89 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 MRPL54Q6P161 138 aaKnown RBP2□□□□□ -2.09
VPS13D-207ENST00000476169 Q6ZRN7 208 aaPredicted RBP2□□□□□ -2.09
VPS13D-207ENST00000476169 ZFP30Q9Y2G7 519 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 SERP1Q9Y6X1 66 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 SPAG17Q6Q759 2223 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 ZNF292O60281 2723 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 CELSR3Q9NYQ7 3312 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 CHD8Q9HCK8 2581 aa2□□□□□ -2.09
VPS13D-207ENST00000476169 ASCC3Q8N3C0 2202 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms