RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 USP24Q9UPU5 2620 aa9.65□□□□□ -0.86
CCNL1-216ENST00000475298 ZNF462Q96JM2 2506 aa9.65□□□□□ -0.86
CCNL1-216ENST00000475298 B4DSR2 109 aa9.65□□□□□ -0.87
CCNL1-216ENST00000475298 H3BUA1 57 aa9.65□□□□□ -0.87
CCNL1-216ENST00000475298 PMVKQ15126 192 aa9.65□□□□□ -0.87
CCNL1-216ENST00000475298 OVOL1O14753 267 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 GNRH2O43555 120 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 PRB1P04280 392 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 CFHR3Q02985 330 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 TRAV21A0A0B4J279 112 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 H3BT86 120 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 S100A4P26447 101 aaKnown RBP9.64□□□□□ -0.87
CCNL1-216ENST00000475298 DEFB112Q30KQ8 113 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 DAZ1Q9NQZ3 744 aaKnown RBP9.64□□□□□ -0.87
CCNL1-216ENST00000475298 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
CCNL1-216ENST00000475298 TRAV25A0A0B4J276 109 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 A0A1B0GX51 115 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 J3KT08 172 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 LINC00526Q96FQ7 95 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 IMUPQ9GZP8 106 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 TP53TG1Q9Y2A0 90 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 TMEM223A0PJW6 202 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 UQCRQO14949 82 aa9.63□□□□□ -0.87
CCNL1-216ENST00000475298 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
CCNL1-216ENST00000475298 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.62□□□□□ -0.87
CCNL1-216ENST00000475298 ZNF876PQ49A33 203 aa9.62□□□□□ -0.87
CCNL1-216ENST00000475298 FAM19A4Q96LR4 140 aa9.62□□□□□ -0.87
CCNL1-216ENST00000475298 RPL39P62891 51 aaKnown RBP9.61□□□□□ -0.87
CCNL1-216ENST00000475298 DEFB104AQ8WTQ1 72 aa9.61□□□□□ -0.87
CCNL1-216ENST00000475298 DPH3P1Q9H4G8 78 aa9.61□□□□□ -0.87
CCNL1-216ENST00000475298 PHLDA3Q9Y5J5 127 aa9.61□□□□□ -0.87
CCNL1-216ENST00000475298 ABCA12Q86UK0 2595 aa9.61□□□□□ -0.87
CCNL1-216ENST00000475298 MUC4Q99102 2169 aa9.61□□□□□ -0.87
CCNL1-216ENST00000475298 SMCR5Q8TEV8 140 aa9.61□□□□□ -0.87
CCNL1-216ENST00000475298 PTPN13Q12923 2485 aa9.61□□□□□ -0.87
CCNL1-216ENST00000475298 MGPP08493 103 aa9.6□□□□□ -0.87
CCNL1-216ENST00000475298 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
CCNL1-216ENST00000475298 ICOSQ9Y6W8 199 aa9.6□□□□□ -0.87
CCNL1-216ENST00000475298 PSMB8P28062 276 aa9.6□□□□□ -0.87
CCNL1-216ENST00000475298 CLEC2BQ92478 149 aa9.6□□□□□ -0.87
CCNL1-216ENST00000475298 SORL1Q92673 2214 aa9.6□□□□□ -0.87
CCNL1-216ENST00000475298 LEPROTO15243 131 aa9.59□□□□□ -0.87
CCNL1-216ENST00000475298 DCANP1Q8TF63 244 aa9.59□□□□□ -0.87
CCNL1-216ENST00000475298 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
CCNL1-216ENST00000475298 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 RPS28P62857 69 aaKnown RBP9.58□□□□□ -0.88
CCNL1-216ENST00000475298 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 JPT2Q9H910 190 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 TEX15Q9BXT5 2789 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 A0A096LNT2 108 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 LST1O00453 97 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 LINC01356Q8N9X3 169 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 TIMM17AQ99595 171 aa9.58□□□□□ -0.88
CCNL1-216ENST00000475298 Q6ZSV7 163 aa9.57□□□□□ -0.88
CCNL1-216ENST00000475298 C2orf48Q96LS8 159 aa9.57□□□□□ -0.88
CCNL1-216ENST00000475298 DUX5Q96PT3 197 aa9.57□□□□□ -0.88
CCNL1-216ENST00000475298 LITAFQ99732 161 aa9.57□□□□□ -0.88
CCNL1-216ENST00000475298 ZNF580Q9UK33 172 aa9.57□□□□□ -0.88
CCNL1-216ENST00000475298 IGHV3-64A0A075B6Q5 118 aa9.57□□□□□ -0.88
CCNL1-216ENST00000475298 TRAV12-3A0A0B4J271 114 aa9.57□□□□□ -0.88
CCNL1-216ENST00000475298 CREBBPQ92793 2442 aa9.56□□□□□ -0.88
CCNL1-216ENST00000475298 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
CCNL1-216ENST00000475298 KLLNB2CW77 178 aa9.56□□□□□ -0.88
CCNL1-216ENST00000475298 K7EMT4 169 aa9.56□□□□□ -0.88
CCNL1-216ENST00000475298 TRAV12-2A0A075B6T6 113 aa9.56□□□□□ -0.88
CCNL1-216ENST00000475298 A0A0J9YX75 114 aa9.56□□□□□ -0.88
CCNL1-216ENST00000475298 COX7CP15954 63 aa9.56□□□□□ -0.88
CCNL1-216ENST00000475298 POLR2KP53803 58 aaKnown RBP9.56□□□□□ -0.88
CCNL1-216ENST00000475298 BBC3Q96PG8 261 aaPredicted RBP9.56□□□□□ -0.88
CCNL1-216ENST00000475298 UBR5O95071 2799 aaPredicted RBP9.56□□□□□ -0.88
CCNL1-216ENST00000475298 SDHAF1A6NFY7 115 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 SYNJ2BPP57105 145 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 DSCR9P59020 149 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 CYSTM1Q9H1C7 97 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 NAV2Q8IVL1 2488 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 ACYP1P07311 99 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 CRYGAP11844 174 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 LINC00315P59091 139 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 KRTAP10-9P60411 292 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
CCNL1-216ENST00000475298 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
CCNL1-216ENST00000475298 A0A087WWL8 130 aa9.54□□□□□ -0.88
CCNL1-216ENST00000475298 PPP1R17O96001 155 aa9.54□□□□□ -0.88
CCNL1-216ENST00000475298 ATP5G1P05496 136 aa9.54□□□□□ -0.88
CCNL1-216ENST00000475298 LINC00643Q86TS7 51 aa9.54□□□□□ -0.88
CCNL1-216ENST00000475298 OR13C6PQ8NH95 151 aa9.54□□□□□ -0.88
CCNL1-216ENST00000475298 SPANXDQ9BXN6 97 aa9.54□□□□□ -0.88
CCNL1-216ENST00000475298 KIF25-AS1Q9Y6Z4 181 aa9.54□□□□□ -0.88
CCNL1-216ENST00000475298 CHD6Q8TD26 2715 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 I3L3M4 83 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 MED14OSP0DP75 135 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 GAGE2AQ6NT46 116 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 C5orf38Q86SI9 138 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 TLN2Q9Y4G6 2542 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 ZNF469Q96JG9 3925 aaPredicted RBP9.53□□□□□ -0.88
CCNL1-216ENST00000475298 IGHV4OR15-8A0A075B7B6 117 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 A0A087WW49 117 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 COX6CP09669 75 aa9.53□□□□□ -0.88
CCNL1-216ENST00000475298 ADAMTSL4-AS1Q5T5F5 129 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms