RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 RAB4AP20338 218 aa9.45□□□□□ -0.9
VAMP4-203ENST00000474047 CAMPP49913 170 aa9.45□□□□□ -0.9
VAMP4-203ENST00000474047 ENHOQ6UWT2 76 aa9.45□□□□□ -0.9
VAMP4-203ENST00000474047 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
VAMP4-203ENST00000474047 NTN5Q8WTR8 489 aaPredicted RBP9.45□□□□□ -0.9
VAMP4-203ENST00000474047 PKHD1P08F94 4074 aa9.44□□□□□ -0.9
VAMP4-203ENST00000474047 MIAQ16674 131 aa9.44□□□□□ -0.9
VAMP4-203ENST00000474047 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
VAMP4-203ENST00000474047 LINC00269Q8N2A0 174 aa9.44□□□□□ -0.9
VAMP4-203ENST00000474047 A0A1B0GW15 77 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 I3L3M4 83 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 PPP1R2P9O14990 202 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 NCR2O95944 276 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 APCSP02743 223 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 S100A8P05109 93 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 GCSHP23434 173 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 PNRC1Q12796 327 aaPredicted RBP9.43□□□□□ -0.9
VAMP4-203ENST00000474047 AMMECR1LQ6DCA0 310 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
VAMP4-203ENST00000474047 PPP1R17O96001 155 aa9.42□□□□□ -0.9
VAMP4-203ENST00000474047 TRBV6-5A0A0K0K1A5 114 aa9.42□□□□□ -0.9
VAMP4-203ENST00000474047 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
VAMP4-203ENST00000474047 MRPL54Q6P161 138 aaKnown RBP9.42□□□□□ -0.9
VAMP4-203ENST00000474047 MAPKAPK5-AS1Q8N8E1 139 aa9.42□□□□□ -0.9
VAMP4-203ENST00000474047 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.41□□□□□ -0.9
VAMP4-203ENST00000474047 F8W036 122 aa9.41□□□□□ -0.9
VAMP4-203ENST00000474047 GAS8-AS1O95177 125 aa9.41□□□□□ -0.9
VAMP4-203ENST00000474047 HLA-DQA1P01909 254 aa9.41□□□□□ -0.9
VAMP4-203ENST00000474047 MT-ND4LP03901 98 aa9.41□□□□□ -0.9
VAMP4-203ENST00000474047 REG3AQ06141 175 aa9.41□□□□□ -0.9
VAMP4-203ENST00000474047 WFDC2Q14508 124 aa9.41□□□□□ -0.9
VAMP4-203ENST00000474047 RNASEKQ6P5S7 137 aaKnown RBP9.41□□□□□ -0.9
VAMP4-203ENST00000474047 SMKR1H3BMG3 65 aa9.4□□□□□ -0.9
VAMP4-203ENST00000474047 HBBP68871 147 aa9.4□□□□□ -0.9
VAMP4-203ENST00000474047 IFITM2Q01629 132 aa9.4□□□□□ -0.9
VAMP4-203ENST00000474047 FAM104BQ5XKR9 115 aa9.4□□□□□ -0.9
VAMP4-203ENST00000474047 PRR34Q9NV39 138 aa9.4□□□□□ -0.9
VAMP4-203ENST00000474047 IGLV4-60A0A075B6I1 120 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 RPS10P46783 165 aaKnown RBP9.39□□□□□ -0.91
VAMP4-203ENST00000474047 C14orf177Q52M58 125 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 C20orf203Q8NBC4 194 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 TMEM70Q9BUB7 260 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
VAMP4-203ENST00000474047 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
VAMP4-203ENST00000474047 H7C423 109 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 CKS2P33552 79 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 KRTAP10-1P60331 282 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 MRPL51Q4U2R6 128 aaKnown RBP9.39□□□□□ -0.91
VAMP4-203ENST00000474047 UQCC3Q6UW78 93 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
VAMP4-203ENST00000474047 IGLV10-54A0A075B6I4 117 aa9.38□□□□□ -0.91
VAMP4-203ENST00000474047 TRAV8-4A0A0B4J246 113 aa9.38□□□□□ -0.91
VAMP4-203ENST00000474047 VCYO14598 125 aa9.38□□□□□ -0.91
VAMP4-203ENST00000474047 FCER1GP30273 86 aa9.38□□□□□ -0.91
VAMP4-203ENST00000474047 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
VAMP4-203ENST00000474047 IGKV3OR2-268A0A0C4DH90 116 aa9.37□□□□□ -0.91
VAMP4-203ENST00000474047 LINC00862A6NCI5 91 aa9.37□□□□□ -0.91
VAMP4-203ENST00000474047 TMEM101Q96IK0 257 aa9.37□□□□□ -0.91
VAMP4-203ENST00000474047 TRBV27A0A0K0K1C4 114 aa9.36□□□□□ -0.91
VAMP4-203ENST00000474047 TSHBP01222 138 aa9.36□□□□□ -0.91
VAMP4-203ENST00000474047 FGF6P10767 208 aa9.36□□□□□ -0.91
VAMP4-203ENST00000474047 POLR2KP53803 58 aaKnown RBP9.36□□□□□ -0.91
VAMP4-203ENST00000474047 SUMO2P61956 95 aaKnown RBP9.36□□□□□ -0.91
VAMP4-203ENST00000474047 KIR2DL4Q99706 377 aa9.36□□□□□ -0.91
VAMP4-203ENST00000474047 DNAH11Q96DT5 4516 aa9.36□□□□□ -0.91
VAMP4-203ENST00000474047 ATP5L2Q7Z4Y8 100 aa9.36□□□□□ -0.91
VAMP4-203ENST00000474047 KIAA1109Q2LD37 5005 aa9.35□□□□□ -0.91
VAMP4-203ENST00000474047 A0A1B0GXF2 115 aa9.35□□□□□ -0.91
VAMP4-203ENST00000474047 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
VAMP4-203ENST00000474047 ZNF25P17030 456 aaPredicted RBP9.35□□□□□ -0.91
VAMP4-203ENST00000474047 NRACQ8N912 160 aa9.35□□□□□ -0.91
VAMP4-203ENST00000474047 TMEM218A2RU14 115 aa9.34□□□□□ -0.91
VAMP4-203ENST00000474047 COMMD7Q86VX2 200 aa9.34□□□□□ -0.91
VAMP4-203ENST00000474047 OR5A1Q8NGJ0 315 aa9.34□□□□□ -0.91
VAMP4-203ENST00000474047 C20orf78Q9BR46 151 aa9.34□□□□□ -0.91
VAMP4-203ENST00000474047 DYNC1H1Q14204 4646 aaKnown RBP9.34□□□□□ -0.91
VAMP4-203ENST00000474047 C7orf77A4D0Y5 90 aa9.34□□□□□ -0.92
VAMP4-203ENST00000474047 D6R8Y8 96 aa9.34□□□□□ -0.92
VAMP4-203ENST00000474047 PPBPP02775 128 aa9.34□□□□□ -0.92
VAMP4-203ENST00000474047 SMAGPQ0VAQ4 97 aa9.34□□□□□ -0.92
VAMP4-203ENST00000474047 DGAT2L7PQ6IED9 249 aa9.34□□□□□ -0.92
VAMP4-203ENST00000474047 TNFRSF6BO95407 300 aa9.33□□□□□ -0.92
VAMP4-203ENST00000474047 ESDP10768 282 aa9.33□□□□□ -0.92
VAMP4-203ENST00000474047 TRBV24-1A0A075B6N3 115 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 TCAPO15273 167 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 KRTAP26-1Q6PEX3 210 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 ORMDL3Q8N138 153 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 TMEM18Q96B42 140 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 GAGE12HA6NDE8 117 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 XGP55808 180 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 TMEM136Q6ZRR5 245 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 Q8N1X5 172 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 CLRN3Q8NCR9 226 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 SEC11CQ9BY50 192 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 CTDSP1Q9GZU7 261 aa9.31□□□□□ -0.92
VAMP4-203ENST00000474047 NPYP01303 97 aa9.3□□□□□ -0.92
VAMP4-203ENST00000474047 PRSS1P07477 247 aa9.3□□□□□ -0.92
VAMP4-203ENST00000474047 ADCYAP1P18509 176 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms