RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 SPART-AS1P0CW21 52 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 AKR1D1P51857 326 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 AKR1C2P52895 323 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 LINC00315P59091 139 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 DEFB131AP59861 70 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 CCL20P78556 96 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 C10orf55Q5SWW7 151 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 C10orf126Q8N4M7 172 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 C21orf62Q9NYP8 219 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 CRCT1Q9UGL9 99 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 NAT8Q9UHE5 227 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 FUT9Q9Y231 359 aa4.39□□□□□ -1.71
SCAF4-205ENST00000472318 IGHV3OR16-8A0A075B7F1 116 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 MEIS3P1A6NDR6 274 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF324O75467 553 aaPredicted RBP4.38□□□□□ -1.71
SCAF4-205ENST00000472318 PTHLHP12272 177 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 S100A4P26447 101 aaKnown RBP4.38□□□□□ -1.71
SCAF4-205ENST00000472318 CSN1S1P47710 185 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 NDUFA6P56556 154 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 RBM11P57052 281 aaKnown RBP4.38□□□□□ -1.71
SCAF4-205ENST00000472318 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 AMN1Q8IY45 258 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 DAND5Q8N907 189 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 OR5C1Q8NGR4 320 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 OTORQ9NRC9 128 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF586Q9NXT0 402 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 IL36BQ9NZH7 164 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
SCAF4-205ENST00000472318 A0A087WTM6 91 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 IGHV3-21A0A0B4J1V1 117 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 C1orf196B1AJZ1 125 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 RBFOX2O43251 390 aaKnown RBP eCLIP4.37□□□□□ -1.715e-7■■□□□ 14.3
SCAF4-205ENST00000472318 PRM2P04554 102 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 LGALS3P17931 250 aaKnown RBP4.37□□□□□ -1.71
SCAF4-205ENST00000472318 AZU1P20160 251 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 SDC2P34741 201 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 CCL18P55774 89 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 RPL30P62888 115 aaKnown RBP4.37□□□□□ -1.71
SCAF4-205ENST00000472318 MSMO1Q15800 293 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 Q5XG85 94 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 AMTNQ6UX39 209 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 NTM-AS1Q6ZSK4 140 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 NIT2Q9NQR4 276 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 TNFSF18Q9UNG2 199 aa4.37□□□□□ -1.71
SCAF4-205ENST00000472318 LOC107984640A0A0U1RRK4 108 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 BBIP1A8MTZ0 92 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF670-ZNF695F2Z2N8 137 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 CORTO00230 105 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 CST7O76096 145 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 GPX1P07203 203 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 OR5AC1P0C628 307 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
SCAF4-205ENST00000472318 TAS2R20P59543 309 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 DERL1Q9BUN8 251 aa4.36□□□□□ -1.71
SCAF4-205ENST00000472318 TRBV7-6A0A0J9YX20 115 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 MCRIP1C9JLW8 97 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 E7EUB6 86 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 MT-ND4LP03901 98 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 RPL35P42766 123 aaKnown RBP4.35□□□□□ -1.71
SCAF4-205ENST00000472318 YPEL3P61236 119 aaPredicted RBP4.35□□□□□ -1.71
SCAF4-205ENST00000472318 PPP3R1P63098 170 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 MPV17LQ2QL34 196 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 KLK9Q2XQG4 91 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 SP6Q3SY56 376 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 TMEM244Q5VVB8 128 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 FAM104BQ5XKR9 115 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 AMMECR1LQ6DCA0 310 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 PACRGLQ8N7B6 248 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 PSMG3Q9BT73 122 aaPredicted RBP4.35□□□□□ -1.71
SCAF4-205ENST00000472318 RHPN1-AS1Q9BWJ2 59 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 SLC39A9Q9NUM3 307 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 KLK9Q9UKQ9 250 aa4.35□□□□□ -1.71
SCAF4-205ENST00000472318 TRBV7-1A0A0A6YYK4 115 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 TMEM223A0PJW6 202 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 PGLYRP1O75594 196 aaPredicted RBP4.34□□□□□ -1.71
SCAF4-205ENST00000472318 NCR2O95944 276 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 NPPCP23582 126 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 RPL27AP46776 148 aaKnown RBP4.34□□□□□ -1.71
SCAF4-205ENST00000472318 TMBIM6P55061 237 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 UBE2BP63146 152 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 HMGN3Q15651 99 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 ARPINQ7Z6K5 226 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 DCANP1Q8TF63 244 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 GABARAPL1Q9H0R8 117 aa4.34□□□□□ -1.71
SCAF4-205ENST00000472318 M0R378 163 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 HRASP01112 189 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 KRASP01116 189 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 FABP2P12104 132 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 CRYBB3P26998 211 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 RAB5CP51148 216 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 SYCNQ0VAF6 134 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 MRPL51Q4U2R6 128 aaKnown RBP4.33□□□□□ -1.72
SCAF4-205ENST00000472318 C9orf129Q5T035 196 aaKnown RBP4.33□□□□□ -1.72
SCAF4-205ENST00000472318 TMEM14EPQ6UXP3 125 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 ZNF705AQ6ZN79 300 aaPredicted RBP4.33□□□□□ -1.72
SCAF4-205ENST00000472318 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
SCAF4-205ENST00000472318 HIST1H2BAQ96A08 127 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms