RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 IGHV1-24A0A0C4DH33 117 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 FAM240BA0A1B0GVZ2 78 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 GRIFINA4D1Z8 144 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 H3BVH4 76 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 H7C1H1 209 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 HMGB3O15347 200 aaKnown RBP3.58□□□□□ -1.84
ITGB1-209ENST00000472147 PET100P0DJ07 73 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 ARL14EPLP0DKL9 152 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 GCHFRP30047 84 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 KRTAP10-6P60371 365 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-209ENST00000472147 GAGE6Q13070 117 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 ZNF674Q2M3X9 581 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 LYPD6BQ8NI32 183 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 ZNF471Q9BX82 626 aaPredicted RBP3.58□□□□□ -1.84
ITGB1-209ENST00000472147 TNFSF18Q9UNG2 199 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 HSPB11Q9Y547 144 aa3.58□□□□□ -1.84
ITGB1-209ENST00000472147 TRAV34A0A0B4J273 112 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 CCDC160A6NGH7 325 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 EIF3GO75821 320 aaKnown RBP eCLIP3.57□□□□□ -1.84
ITGB1-209ENST00000472147 SIX6O95475 246 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 MPC2O95563 127 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 CDC34P49427 236 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-209ENST00000472147 RAB5CP51148 216 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 RAB2AP61019 212 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 PPP1R1CQ8WVI7 109 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 AQP10Q96PS8 301 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 ACTR3CQ9C0K3 210 aaPredicted RBP3.57□□□□□ -1.84
ITGB1-209ENST00000472147 ARL2-SNX15V9GYD0 113 aa3.57□□□□□ -1.84
ITGB1-209ENST00000472147 IGKV2-24A0A0C4DH68 120 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 M0R036 132 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 SH2D1AO60880 128 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 SMIM17P0DL12 118 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 ATP6V0CP27449 155 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 LRRC37A5PQ49AS3 106 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 PSMG3Q9BT73 122 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-209ENST00000472147 SMIM3Q9BZL3 60 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 WFDC1Q9HC57 220 aa3.56□□□□□ -1.84
ITGB1-209ENST00000472147 IGLV4-60A0A075B6I1 120 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 TRAV26-2A0A0B4J265 109 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 M0QY20 66 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 PEX7O00628 323 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 VCYO14598 125 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 S100A9P06702 114 aaKnown RBP3.55□□□□□ -1.84
ITGB1-209ENST00000472147 CXCL1P09341 107 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 OR5AL1P0C617 328 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
ITGB1-209ENST00000472147 ZNF56Q15929 161 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 SPANXN1Q5VSR9 72 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 CLPSL2Q6UWE3 100 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 C15orf56Q8N910 161 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 FMC1Q96HJ9 113 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 TCEAL7Q9BRU2 100 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 TMEM243Q9BU79 118 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 CCDC32Q9BV29 185 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 MED28Q9H204 178 aa3.55□□□□□ -1.84
ITGB1-209ENST00000472147 TMSB15BA0A087X1C1 80 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 GVQW2A0A096LPI5 108 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-209ENST00000472147 MUC21A0A0G2JKD1 596 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 SNAI2O43623 268 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 SCGB1D1O95968 90 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 LTAP01374 205 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 FHITP49789 147 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 SULT1A2P50226 295 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 H2BFSP57053 126 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 DIRC1Q969H9 104 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 PGLYRP4Q96LB8 373 aa3.54□□□□□ -1.84
ITGB1-209ENST00000472147 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 IGLV1-50A0A075B6I6 118 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 A0A096LNI7 61 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 FAM74A7A6NL05 159 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 H7C423 109 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 UBE2L6O14933 153 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 UBE2G1P62253 170 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 CACNG7P62955 275 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 LINC00299Q6ZSB3 139 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 Q86TA4 180 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 FER1L6-AS1Q8NA97 138 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 OR10AG1Q8NH19 301 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 GFRA4Q9GZZ7 299 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 NIT2Q9NQR4 276 aa3.53□□□□□ -1.84
ITGB1-209ENST00000472147 INMT-MINDY4F8WBC2 141 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 MT-ND6P03923 174 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 COTL1Q14019 142 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 PRR4Q16378 134 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 HIGD2BQ4VC39 106 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 RASL11AQ6T310 242 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 STOML3Q8TAV4 291 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 CHCHD10Q8WYQ3 142 aaPredicted RBP3.52□□□□□ -1.85
ITGB1-209ENST00000472147 FAM210AQ96ND0 272 aa3.52□□□□□ -1.85
ITGB1-209ENST00000472147 TRAV1-1A0A0B4J248 108 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 IGHV1-58A0A0C4DH39 117 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 CTXND1A0A1B0GTU2 59 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 F2Z2F3 143 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 SSNA1O43805 119 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 FGF6P10767 208 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 UBE2G2P60604 165 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 SYCNQ0VAF6 134 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 BAGE2Q86Y30 109 aa3.51□□□□□ -1.85
ITGB1-209ENST00000472147 INO80EQ8NBZ0 244 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms