RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 C10orf99Q6UWK7 81 aa0.55□□□□□ -2.32
SSB-209ENST00000470621 GTF2H5Q6ZYL4 71 aa0.55□□□□□ -2.32
SSB-209ENST00000470621 SVBPQ8N300 66 aa0.55□□□□□ -2.32
SSB-209ENST00000470621 ACBD7Q8N6N7 88 aa0.55□□□□□ -2.32
SSB-209ENST00000470621 COL4A6Q14031 1691 aa0.55□□□□□ -2.32
SSB-209ENST00000470621 ANKRD26Q9UPS8 1709 aa0.55□□□□□ -2.32
SSB-209ENST00000470621 DOCK11Q5JSL3 2073 aa0.55□□□□□ -2.32
SSB-209ENST00000470621 ZNF236Q9UL36 1845 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 MRC1P22897 1456 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 PXDNQ92626 1479 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 F5P12259 2224 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 TANC1Q9C0D5 1861 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 ZMYM4Q5VZL5 1548 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 TOPAZ1Q8N9V7 1692 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 TRBV7-1A0A0A6YYK4 115 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 UBE2L5PA0A1B0GUS4 154 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 A6NIN4 97 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 M0R143 59 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 S100A8P05109 93 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 SNCAP37840 140 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 UBE2L3P68036 154 aaKnown RBP0.54□□□□□ -2.32
SSB-209ENST00000470621 SSBP1Q04837 148 aaKnown RBP0.54□□□□□ -2.32
SSB-209ENST00000470621 C10orf128Q5T292 105 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 C4orf33Q8N1A6 199 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 WFDC6Q9BQY6 131 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 TMEM14BQ9NUH8 114 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 AKAP12Q02952 1782 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 ZNF609O15014 1411 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 PPIP5K1Q6PFW1 1433 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 GOLGA3Q08378 1498 aa0.54□□□□□ -2.32
SSB-209ENST00000470621 KDM6BO15054 1643 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 LRRC37A3O60309 1634 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 DOCK2Q92608 1830 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 TRGV1A0A0A0MS02 117 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 hADV29S1A0JD25 119 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 FAM24AA6NFZ4 105 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 SSSCA1O60232 199 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 CCL18P55774 89 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 RPL37P61927 97 aaKnown RBP0.53□□□□□ -2.32
SSB-209ENST00000470621 AQP10Q96PS8 301 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 BPESC1Q9GZL8 116 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 CYP4F30PQ9H0H9 118 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 NDUFA4L2Q9NRX3 87 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 BET1LQ9NYM9 111 aa0.53□□□□□ -2.32
SSB-209ENST00000470621 MAGI1Q96QZ7 1491 aaPredicted RBP0.53□□□□□ -2.33
SSB-209ENST00000470621 KNTC1P50748 2209 aa0.53□□□□□ -2.33
SSB-209ENST00000470621 TRBV7-3A0A075B6L6 115 aa0.52□□□□□ -2.33
SSB-209ENST00000470621 PKIAP61925 76 aa0.52□□□□□ -2.33
SSB-209ENST00000470621 DCDP81605 110 aaKnown RBP0.52□□□□□ -2.33
SSB-209ENST00000470621 V9GYV3 84 aa0.52□□□□□ -2.33
SSB-209ENST00000470621 IFT172Q9UG01 1749 aa0.52□□□□□ -2.33
SSB-209ENST00000470621 GVQW2A0A096LPI5 108 aaPredicted RBP0.51□□□□□ -2.33
SSB-209ENST00000470621 TRAV22A0A0B4J277 110 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 G3V318 75 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 PPP1R17O96001 155 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 SPINT3P49223 89 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 MYOM1P52179 1685 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 ZNF137PP52743 207 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 GNG11P61952 73 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 Q0VG73 95 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 TTC37Q6PGP7 1564 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 ANKRD36BQ8N2N9 1353 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 AMELXQ99217 191 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 CDC42SE2Q9NRR3 84 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 RAPGEF2Q9Y4G8 1499 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 LENEPQ9Y5L5 61 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 LAMC3Q9Y6N6 1575 aa0.51□□□□□ -2.33
SSB-209ENST00000470621 FRAS1Q86XX4 4008 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 KDM5AP29375 1690 aaKnown RBP0.5□□□□□ -2.33
SSB-209ENST00000470621 SCN7AQ01118 1682 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 PRDM15P57071 1507 aaPredicted RBP0.5□□□□□ -2.33
SSB-209ENST00000470621 HMGXB3Q12766 1538 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 ADGRL2O95490 1459 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 TEX14Q8IWB6 1497 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 TRAV1-2A0A0B4J238 106 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 A0A0D9SG42 100 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 H3BQ15 152 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 HMGN4O00479 90 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 ATP5EP56381 51 aaPredicted RBP0.5□□□□□ -2.33
SSB-209ENST00000470621 UBE2D3P61077 147 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 UBE2D2P62837 147 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 FAM74A4Q5TZK3 123 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 C10orf95Q9H7T3 257 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 LINC00472Q9H8W2 130 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 PI4KAP42356 2102 aa0.5□□□□□ -2.33
SSB-209ENST00000470621 TOP2BQ02880 1626 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 CDK13Q14004 1512 aaKnown RBP0.49□□□□□ -2.33
SSB-209ENST00000470621 CHKB-CPT1BH3BT56 60 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 M0R135 149 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 GNGT2O14610 69 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 UBA52P62987 128 aaKnown RBP0.49□□□□□ -2.33
SSB-209ENST00000470621 COL5A1-AS1Q5SY13 56 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 SFTA2Q6UW10 78 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 MYOZ3Q8TDC0 251 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 FAM167A-AS1Q96KT0 104 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 MGST2Q99735 147 aa0.49□□□□□ -2.33
SSB-209ENST00000470621 TROQ12816 1431 aaPredicted RBP0.48□□□□□ -2.33
SSB-209ENST00000470621 MYO7AQ13402 2215 aa0.48□□□□□ -2.33
SSB-209ENST00000470621 PIGBOS1A0A0B4J2F0 54 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 498 ms