RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 GAGE12JA6NER3 117 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 H7C1H1 209 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 NDUFA6P56556 154 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 RAB5BP61020 215 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 GAGE1Q13065 139 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 GAGE4Q13068 117 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 GAGE5Q13069 117 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 ESRGQ1W209 222 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 GAGE13Q4V321 117 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 VSIG2Q96IQ7 327 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 UPK3BQ9BT76 320 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 NIT2Q9NQR4 276 aa7.93□□□□□ -1.14
HLA-C-206ENST00000470363 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
HLA-C-206ENST00000470363 PAX4O43316 350 aa7.92□□□□□ -1.14
HLA-C-206ENST00000470363 IFI27P40305 119 aaPredicted RBP7.92□□□□□ -1.14
HLA-C-206ENST00000470363 PRO0255Q9UI72 69 aa7.92□□□□□ -1.14
HLA-C-206ENST00000470363 IGHV3-38A0A0C4DH36 116 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 C16orf90A8MZG2 172 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 NUPR1O60356 82 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 GYPEP15421 78 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 SUMO2P61956 95 aaKnown RBP7.91□□□□□ -1.14
HLA-C-206ENST00000470363 RHOHQ15669 191 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 BAGE3Q86Y29 109 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 URB1-AS1Q96HZ7 61 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 PRADC1Q9BSG0 188 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 MAP1LC3AQ9H492 121 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 TNFRSF18Q9Y5U5 241 aa7.91□□□□□ -1.14
HLA-C-206ENST00000470363 TRBV6-5A0A0K0K1A5 114 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 SDHAF1A6NFY7 115 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 PPP1R17O96001 155 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 POLR2KP53803 58 aaKnown RBP7.9□□□□□ -1.14
HLA-C-206ENST00000470363 LINC00310P59036 64 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 RPL36AP83881 106 aaKnown RBP7.9□□□□□ -1.14
HLA-C-206ENST00000470363 Q0VG73 95 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 NIT1Q86X76 327 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 PRSS3P2Q8NHM4 247 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 RPL36ALQ969Q0 106 aaKnown RBP7.9□□□□□ -1.14
HLA-C-206ENST00000470363 DNAJC30Q96LL9 226 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 C20orf78Q9BR46 151 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 TMEM70Q9BUB7 260 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 LAMTOR2Q9Y2Q5 125 aa7.9□□□□□ -1.14
HLA-C-206ENST00000470363 MRPS16Q9Y3D3 137 aaKnown RBP7.9□□□□□ -1.14
HLA-C-206ENST00000470363 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
HLA-C-206ENST00000470363 A0A096LPF7 62 aa7.89□□□□□ -1.15
HLA-C-206ENST00000470363 TRBV10-1A0A0K0K1A3 114 aa7.89□□□□□ -1.15
HLA-C-206ENST00000470363 TCAPO15273 167 aa7.89□□□□□ -1.15
HLA-C-206ENST00000470363 BTF3P20290 206 aaKnown RBP7.89□□□□□ -1.15
HLA-C-206ENST00000470363 KRTAP10-2P60368 255 aa7.89□□□□□ -1.15
HLA-C-206ENST00000470363 RNASEKQ6P5S7 137 aaKnown RBP7.89□□□□□ -1.15
HLA-C-206ENST00000470363 Q8N8P6 123 aa7.89□□□□□ -1.15
HLA-C-206ENST00000470363 SMIM2Q9BVW6 85 aa7.89□□□□□ -1.15
HLA-C-206ENST00000470363 PRSS47A8MTI9 375 aa7.88□□□□□ -1.15
HLA-C-206ENST00000470363 VCYO14598 125 aa7.88□□□□□ -1.15
HLA-C-206ENST00000470363 SERF1AO75920 110 aa7.88□□□□□ -1.15
HLA-C-206ENST00000470363 PMCHP20382 165 aa7.88□□□□□ -1.15
HLA-C-206ENST00000470363 UBE2D3P61077 147 aa7.88□□□□□ -1.15
HLA-C-206ENST00000470363 UBE2D2P62837 147 aa7.88□□□□□ -1.15
HLA-C-206ENST00000470363 Q6ZRN7 208 aaPredicted RBP7.88□□□□□ -1.15
HLA-C-206ENST00000470363 FA2HQ7L5A8 372 aa7.88□□□□□ -1.15
HLA-C-206ENST00000470363 LINC00614P0C842 121 aa7.87□□□□□ -1.15
HLA-C-206ENST00000470363 LINC00694P0DN24 101 aa7.87□□□□□ -1.15
HLA-C-206ENST00000470363 TRBV27A0A0K0K1C4 114 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 I3L3M4 83 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 TSHBP01222 138 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 S100A6P06703 90 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 SNRPEP62304 92 aaKnown RBP7.86□□□□□ -1.15
HLA-C-206ENST00000470363 RPL32P62910 135 aaKnown RBP7.86□□□□□ -1.15
HLA-C-206ENST00000470363 PMCHL1Q16048 86 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 TTC32Q5I0X7 151 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 SPATA12Q7Z6I5 190 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 FAM19A2Q8N3H0 131 aa7.86□□□□□ -1.15
HLA-C-206ENST00000470363 NXT2Q9NPJ8 142 aaKnown RBP7.86□□□□□ -1.15
HLA-C-206ENST00000470363 MRPL23Q16540 153 aaKnown RBP7.85□□□□□ -1.15
HLA-C-206ENST00000470363 PDZD11Q5EBL8 140 aa7.85□□□□□ -1.15
HLA-C-206ENST00000470363 COA6Q5JTJ3 125 aaKnown RBP7.85□□□□□ -1.15
HLA-C-206ENST00000470363 NTM-AS1Q6ZSK4 140 aa7.85□□□□□ -1.15
HLA-C-206ENST00000470363 Q8N1X5 172 aa7.85□□□□□ -1.15
HLA-C-206ENST00000470363 MAPKAPK5-AS1Q8N8E1 139 aa7.85□□□□□ -1.15
HLA-C-206ENST00000470363 ATP6V0E2Q8NHE4 81 aa7.85□□□□□ -1.15
HLA-C-206ENST00000470363 ICOSQ9Y6W8 199 aa7.85□□□□□ -1.15
HLA-C-206ENST00000470363 HSBP1O75506 76 aa7.84□□□□□ -1.15
HLA-C-206ENST00000470363 FCER1GP30273 86 aa7.84□□□□□ -1.15
HLA-C-206ENST00000470363 LAGE3Q14657 143 aa7.84□□□□□ -1.15
HLA-C-206ENST00000470363 DAZ4Q86SG3 579 aaKnown RBP7.84□□□□□ -1.15
HLA-C-206ENST00000470363 DAZ3Q9NR90 486 aaKnown RBP7.84□□□□□ -1.15
HLA-C-206ENST00000470363 AP5S1Q9NUS5 200 aa7.84□□□□□ -1.15
HLA-C-206ENST00000470363 COTL1Q14019 142 aa7.83□□□□□ -1.16
HLA-C-206ENST00000470363 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
HLA-C-206ENST00000470363 KIR2DL4Q99706 377 aa7.83□□□□□ -1.16
HLA-C-206ENST00000470363 FAT1Q14517 4588 aa7.83□□□□□ -1.16
HLA-C-206ENST00000470363 A0A096LNJ9 63 aa7.82□□□□□ -1.16
HLA-C-206ENST00000470363 LINC01546A6NGU7 62 aa7.82□□□□□ -1.16
HLA-C-206ENST00000470363 C5orf52A6NGY3 159 aa7.82□□□□□ -1.16
HLA-C-206ENST00000470363 HERC1Q15751 4861 aa7.82□□□□□ -1.16
HLA-C-206ENST00000470363 LYPD5Q6UWN5 251 aa7.82□□□□□ -1.16
HLA-C-206ENST00000470363 HIST3H2BBQ8N257 126 aa7.82□□□□□ -1.16
HLA-C-206ENST00000470363 IGHV1-24A0A0C4DH33 117 aa7.81□□□□□ -1.16
HLA-C-206ENST00000470363 SIVA1O15304 175 aa7.81□□□□□ -1.16
HLA-C-206ENST00000470363 ESDP10768 282 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms