RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 DPH3P1Q9H4G8 78 aa8.51□□□□□ -1.05
CPSF4-210ENST00000469897 SLPIP03973 132 aa8.5□□□□□ -1.05
CPSF4-210ENST00000469897 TWIST1Q15672 202 aa8.5□□□□□ -1.05
CPSF4-210ENST00000469897 UBE2L6O14933 153 aa8.49□□□□□ -1.05
CPSF4-210ENST00000469897 AMTP48728 403 aa8.49□□□□□ -1.05
CPSF4-210ENST00000469897 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
CPSF4-210ENST00000469897 WDR73Q6P4I2 378 aa8.49□□□□□ -1.05
CPSF4-210ENST00000469897 PGLYRP4Q96LB8 373 aa8.49□□□□□ -1.05
CPSF4-210ENST00000469897 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
CPSF4-210ENST00000469897 BCL2P10415 239 aa8.48□□□□□ -1.05
CPSF4-210ENST00000469897 COTL1Q14019 142 aa8.48□□□□□ -1.05
CPSF4-210ENST00000469897 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
CPSF4-210ENST00000469897 OCC1Q8TAD7 63 aa8.48□□□□□ -1.05
CPSF4-210ENST00000469897 RNASE7Q9H1E1 156 aaKnown RBP8.48□□□□□ -1.05
CPSF4-210ENST00000469897 AP5S1Q9NUS5 200 aa8.48□□□□□ -1.05
CPSF4-210ENST00000469897 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
CPSF4-210ENST00000469897 IGKV3OR2-268A0A0C4DH90 116 aa8.47□□□□□ -1.05
CPSF4-210ENST00000469897 A0A1B0GVG6 124 aa8.47□□□□□ -1.05
CPSF4-210ENST00000469897 FOXA3P55318 350 aaPredicted RBP8.47□□□□□ -1.05
CPSF4-210ENST00000469897 FAT3Q8TDW7 4589 aa8.46□□□□□ -1.05
CPSF4-210ENST00000469897 IGHV3-64A0A075B6Q5 118 aa8.46□□□□□ -1.06
CPSF4-210ENST00000469897 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.06
CPSF4-210ENST00000469897 GAGE12HA6NDE8 117 aa8.46□□□□□ -1.06
CPSF4-210ENST00000469897 K7EN84 100 aa8.46□□□□□ -1.06
CPSF4-210ENST00000469897 CHTF8P0CG12 524 aa8.46□□□□□ -1.06
CPSF4-210ENST00000469897 CTRLP40313 264 aa8.46□□□□□ -1.06
CPSF4-210ENST00000469897 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
CPSF4-210ENST00000469897 Q6ZNX1 250 aa8.46□□□□□ -1.06
CPSF4-210ENST00000469897 RPP21Q9H633 154 aaKnown RBP8.46□□□□□ -1.06
CPSF4-210ENST00000469897 A0A087WYN8 130 aa8.45□□□□□ -1.06
CPSF4-210ENST00000469897 SLC51BQ86UW2 128 aa8.45□□□□□ -1.06
CPSF4-210ENST00000469897 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
CPSF4-210ENST00000469897 GTSF1Q8WW33 167 aa8.44□□□□□ -1.06
CPSF4-210ENST00000469897 CNFNQ9BYD5 112 aa8.44□□□□□ -1.06
CPSF4-210ENST00000469897 HMCN2Q8NDA2 5059 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
CPSF4-210ENST00000469897 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
CPSF4-210ENST00000469897 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 AMMECR1LQ6DCA0 310 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 CFAP161Q6P656 301 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 SMIM15Q7Z3B0 74 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 TCTE3Q8IZS6 198 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 PLA2G2DQ9UNK4 145 aa8.43□□□□□ -1.06
CPSF4-210ENST00000469897 TAGLN2P37802 199 aaKnown RBP8.42□□□□□ -1.06
CPSF4-210ENST00000469897 COX6A2Q02221 97 aa8.42□□□□□ -1.06
CPSF4-210ENST00000469897 RNASEKQ6P5S7 137 aaKnown RBP8.42□□□□□ -1.06
CPSF4-210ENST00000469897 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
CPSF4-210ENST00000469897 CHCHD10Q8WYQ3 142 aaPredicted RBP8.42□□□□□ -1.06
CPSF4-210ENST00000469897 GATCO43716 136 aaKnown RBP8.41□□□□□ -1.06
CPSF4-210ENST00000469897 FGF6P10767 208 aa8.41□□□□□ -1.06
CPSF4-210ENST00000469897 PMCHP20382 165 aa8.41□□□□□ -1.06
CPSF4-210ENST00000469897 RPS10P46783 165 aaKnown RBP8.41□□□□□ -1.06
CPSF4-210ENST00000469897 Q6ZRU5 148 aa8.41□□□□□ -1.06
CPSF4-210ENST00000469897 RNF185Q96GF1 192 aa8.41□□□□□ -1.06
CPSF4-210ENST00000469897 SDHAF1A6NFY7 115 aa8.4□□□□□ -1.06
CPSF4-210ENST00000469897 NCR2O95944 276 aa8.4□□□□□ -1.06
CPSF4-210ENST00000469897 APCSP02743 223 aa8.4□□□□□ -1.06
CPSF4-210ENST00000469897 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
CPSF4-210ENST00000469897 PRSS3P2Q8NHM4 247 aa8.4□□□□□ -1.06
CPSF4-210ENST00000469897 FAM231BA6NCW3 169 aa8.39□□□□□ -1.07
CPSF4-210ENST00000469897 H7C423 109 aa8.39□□□□□ -1.07
CPSF4-210ENST00000469897 GAS8-AS1O95177 125 aa8.39□□□□□ -1.07
CPSF4-210ENST00000469897 CEBPGP53567 150 aa8.39□□□□□ -1.07
CPSF4-210ENST00000469897 TEX261Q6UWH6 196 aa8.39□□□□□ -1.07
CPSF4-210ENST00000469897 PLAC8Q9NZF1 115 aa8.39□□□□□ -1.07
CPSF4-210ENST00000469897 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
CPSF4-210ENST00000469897 IGKV2-24A0A0C4DH68 120 aa8.38□□□□□ -1.07
CPSF4-210ENST00000469897 A8MWL6 223 aa8.38□□□□□ -1.07
CPSF4-210ENST00000469897 I3L3M4 83 aa8.38□□□□□ -1.07
CPSF4-210ENST00000469897 PHOX2AO14813 284 aa8.38□□□□□ -1.07
CPSF4-210ENST00000469897 NDUFS6O75380 124 aaKnown RBP8.38□□□□□ -1.07
CPSF4-210ENST00000469897 MAJINQ3KP22 176 aa8.38□□□□□ -1.07
CPSF4-210ENST00000469897 FAM231DQ6ZW35 169 aa8.38□□□□□ -1.07
CPSF4-210ENST00000469897 TMEM250H0YL14 139 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 XCL1P47992 114 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 BLOC1S1P78537 153 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 FOXI1Q12951 378 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 ALKAL2Q6UX46 152 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 LYPD6BQ8NI32 183 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 UBR4Q5T4S7 5183 aa8.37□□□□□ -1.07
CPSF4-210ENST00000469897 TRBV6-5A0A0K0K1A5 114 aa8.36□□□□□ -1.07
CPSF4-210ENST00000469897 LINC00959A0A1B0GUT2 108 aa8.36□□□□□ -1.07
CPSF4-210ENST00000469897 STPG4Q8N801 248 aa8.36□□□□□ -1.07
CPSF4-210ENST00000469897 C7orf33Q8WU49 177 aa8.36□□□□□ -1.07
CPSF4-210ENST00000469897 LINC00526Q96FQ7 95 aa8.36□□□□□ -1.07
CPSF4-210ENST00000469897 BTF3L4Q96K17 158 aa8.36□□□□□ -1.07
CPSF4-210ENST00000469897 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
CPSF4-210ENST00000469897 GVQW2A0A096LPI5 108 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-210ENST00000469897 CCL25O15444 150 aa8.35□□□□□ -1.07
CPSF4-210ENST00000469897 TSHBP01222 138 aa8.35□□□□□ -1.07
CPSF4-210ENST00000469897 ESDP10768 282 aa8.35□□□□□ -1.07
CPSF4-210ENST00000469897 ZNF25P17030 456 aaPredicted RBP8.35□□□□□ -1.07
CPSF4-210ENST00000469897 BORCS7Q96B45 105 aa8.35□□□□□ -1.07
CPSF4-210ENST00000469897 TMEM242Q9NWH2 141 aa8.35□□□□□ -1.07
CPSF4-210ENST00000469897 A0A096LNI7 61 aa8.34□□□□□ -1.07
CPSF4-210ENST00000469897 RAB4AP20338 218 aa8.34□□□□□ -1.07
CPSF4-210ENST00000469897 CT83Q5H943 113 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms