RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 FOXI1Q12951 378 aa11.41□□□□□ -0.58
LINC00888-201ENST00000468380 NIT2Q9NQR4 276 aa11.41□□□□□ -0.58
LINC00888-201ENST00000468380 BORCS7-ASMTA0A0B4J1R7 106 aa11.4□□□□□ -0.58
LINC00888-201ENST00000468380 SCO2A0A1W2PP80 73 aa11.4□□□□□ -0.58
LINC00888-201ENST00000468380 S100A9P06702 114 aaKnown RBP11.4□□□□□ -0.58
LINC00888-201ENST00000468380 ALG5Q9Y673 324 aa11.4□□□□□ -0.58
LINC00888-201ENST00000468380 KRTAP9-6A0A140TA67 174 aa11.39□□□□□ -0.59
LINC00888-201ENST00000468380 IGLC6P0CF74 106 aa11.39□□□□□ -0.59
LINC00888-201ENST00000468380 COTL1Q14019 142 aa11.39□□□□□ -0.59
LINC00888-201ENST00000468380 PRR26Q8N8Z3 221 aa11.39□□□□□ -0.59
LINC00888-201ENST00000468380 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
LINC00888-201ENST00000468380 TPPP3Q9BW30 176 aa11.38□□□□□ -0.59
LINC00888-201ENST00000468380 ZNF664Q8N3J9 261 aa11.37□□□□□ -0.59
LINC00888-201ENST00000468380 PSORS1C2Q9UIG4 136 aa11.37□□□□□ -0.59
LINC00888-201ENST00000468380 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
LINC00888-201ENST00000468380 FER1L6-AS1Q8NA97 138 aa11.36□□□□□ -0.59
LINC00888-201ENST00000468380 CARD19Q96LW7 228 aa11.36□□□□□ -0.59
LINC00888-201ENST00000468380 FAT4Q6V0I7 4981 aa11.36□□□□□ -0.59
LINC00888-201ENST00000468380 TMUB2Q71RG4 321 aa11.35□□□□□ -0.59
LINC00888-201ENST00000468380 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.34□□□□□ -0.59
LINC00888-201ENST00000468380 IGKV2-29A2NJV5 120 aaPredicted RBP11.34□□□□□ -0.59
LINC00888-201ENST00000468380 NTF3P20783 257 aa11.34□□□□□ -0.59
LINC00888-201ENST00000468380 XCL1P47992 114 aa11.34□□□□□ -0.59
LINC00888-201ENST00000468380 LCE2AQ5TA79 106 aaPredicted RBP11.34□□□□□ -0.59
LINC00888-201ENST00000468380 Q6ZNX1 250 aa11.34□□□□□ -0.59
LINC00888-201ENST00000468380 MED28Q9H204 178 aa11.34□□□□□ -0.59
LINC00888-201ENST00000468380 CYTL1Q9NRR1 136 aa11.34□□□□□ -0.59
LINC00888-201ENST00000468380 DEFA1P59665 94 aa11.33□□□□□ -0.6
LINC00888-201ENST00000468380 CACNG7P62955 275 aa11.33□□□□□ -0.6
LINC00888-201ENST00000468380 GAGE2BQ13066 116 aa11.33□□□□□ -0.6
LINC00888-201ENST00000468380 AMMECR1LQ6DCA0 310 aa11.33□□□□□ -0.6
LINC00888-201ENST00000468380 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
LINC00888-201ENST00000468380 PKIGQ9Y2B9 76 aa11.33□□□□□ -0.6
LINC00888-201ENST00000468380 FXYD6-FXYD2A0A087WZ82 144 aa11.32□□□□□ -0.6
LINC00888-201ENST00000468380 IGHV1-58A0A0C4DH39 117 aa11.32□□□□□ -0.6
LINC00888-201ENST00000468380 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
LINC00888-201ENST00000468380 A0A1B0GV50 99 aa11.31□□□□□ -0.6
LINC00888-201ENST00000468380 MT-ND6P03923 174 aa11.31□□□□□ -0.6
LINC00888-201ENST00000468380 FGF6P10767 208 aa11.31□□□□□ -0.6
LINC00888-201ENST00000468380 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
LINC00888-201ENST00000468380 OR2D3Q8NGH3 330 aa11.31□□□□□ -0.6
LINC00888-201ENST00000468380 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 LINC00959A0A1B0GUT2 108 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 CCL25O15444 150 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 RPL35P42766 123 aaKnown RBP11.3□□□□□ -0.6
LINC00888-201ENST00000468380 C1orf137Q5JT78 98 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 LYZL1Q6UWQ5 148 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 OR5A1Q8NGJ0 315 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 SFT2D1Q8WV19 159 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
LINC00888-201ENST00000468380 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
LINC00888-201ENST00000468380 GIPP09681 153 aaPredicted RBP11.29□□□□□ -0.6
LINC00888-201ENST00000468380 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
LINC00888-201ENST00000468380 A0A0U1RQV1 116 aa11.28□□□□□ -0.6
LINC00888-201ENST00000468380 LOC107984640A0A0U1RRK4 108 aa11.28□□□□□ -0.6
LINC00888-201ENST00000468380 F2Z2F3 143 aa11.28□□□□□ -0.6
LINC00888-201ENST00000468380 ZNF561-AS1K7EIQ3 104 aa11.28□□□□□ -0.6
LINC00888-201ENST00000468380 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
LINC00888-201ENST00000468380 PRR4Q16378 134 aa11.28□□□□□ -0.6
LINC00888-201ENST00000468380 C9orf116Q5BN46 136 aaPredicted RBP11.28□□□□□ -0.6
LINC00888-201ENST00000468380 PHF5AQ7RTV0 110 aaKnown RBP11.28□□□□□ -0.6
LINC00888-201ENST00000468380 H7C423 109 aa11.27□□□□□ -0.61
LINC00888-201ENST00000468380 PFDN1O60925 122 aa11.27□□□□□ -0.61
LINC00888-201ENST00000468380 BCL2P10415 239 aa11.27□□□□□ -0.61
LINC00888-201ENST00000468380 RPL39LQ96EH5 51 aaKnown RBP11.27□□□□□ -0.61
LINC00888-201ENST00000468380 NCR2O95944 276 aa11.26□□□□□ -0.61
LINC00888-201ENST00000468380 IGLV4-69A0A075B6H9 119 aa11.25□□□□□ -0.61
LINC00888-201ENST00000468380 G3V3Q6 166 aa11.25□□□□□ -0.61
LINC00888-201ENST00000468380 IGLV7-43P04211 117 aa11.25□□□□□ -0.61
LINC00888-201ENST00000468380 CAMPP49913 170 aa11.25□□□□□ -0.61
LINC00888-201ENST00000468380 KCNRGQ8N5I3 272 aa11.25□□□□□ -0.61
LINC00888-201ENST00000468380 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
LINC00888-201ENST00000468380 DIRC1Q969H9 104 aa11.25□□□□□ -0.61
LINC00888-201ENST00000468380 APCSP02743 223 aa11.24□□□□□ -0.61
LINC00888-201ENST00000468380 CENPWQ5EE01 88 aa11.24□□□□□ -0.61
LINC00888-201ENST00000468380 CD164L2Q6UWJ8 174 aa11.24□□□□□ -0.61
LINC00888-201ENST00000468380 KRTAP11-1Q8IUC1 163 aa11.24□□□□□ -0.61
LINC00888-201ENST00000468380 C9orf62Q8N4C0 152 aa11.24□□□□□ -0.61
LINC00888-201ENST00000468380 NUP35Q8NFH5 326 aa11.24□□□□□ -0.61
LINC00888-201ENST00000468380 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.23□□□□□ -0.61
LINC00888-201ENST00000468380 IFNA1P01562 189 aa11.23□□□□□ -0.61
LINC00888-201ENST00000468380 KRTAP1-4P0C5Y4 121 aa11.23□□□□□ -0.61
LINC00888-201ENST00000468380 ZNF25P17030 456 aaPredicted RBP11.23□□□□□ -0.61
LINC00888-201ENST00000468380 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
LINC00888-201ENST00000468380 RAB19A4D1S5 217 aa11.22□□□□□ -0.61
LINC00888-201ENST00000468380 H0Y9J4 135 aa11.22□□□□□ -0.61
LINC00888-201ENST00000468380 FOXA3P55318 350 aaPredicted RBP11.22□□□□□ -0.61
LINC00888-201ENST00000468380 TWIST1Q15672 202 aa11.22□□□□□ -0.61
LINC00888-201ENST00000468380 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
LINC00888-201ENST00000468380 IGLV1-50A0A075B6I6 118 aa11.21□□□□□ -0.61
LINC00888-201ENST00000468380 SDHAF1A6NFY7 115 aa11.21□□□□□ -0.61
LINC00888-201ENST00000468380 SS18Q15532 418 aa11.21□□□□□ -0.61
LINC00888-201ENST00000468380 ISOC2Q96AB3 205 aa11.21□□□□□ -0.61
LINC00888-201ENST00000468380 XKRY2A2RUG3 117 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 ARPC5O15511 151 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 APOMO95445 188 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 ESDP10768 282 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 CTRLP40313 264 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 CCL20P78556 96 aa11.2□□□□□ -0.62
LINC00888-201ENST00000468380 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms