RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 PAX4O43316 350 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BKO60814 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BJP06899 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BOP23527 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 SRIP30626 198 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BBP33778 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BDP58876 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 RAB5BP61020 215 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BCP62807 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 RPL32P62910 135 aaKnown RBP10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST2H2BEQ16778 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.66□□□□□ -0.7
TSSC4-208ENST00000467308 Q6ZSN1 163 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BHQ93079 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BNQ99877 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 HIST1H2BMQ99879 126 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
TSSC4-208ENST00000467308 TRAV9-2A0A087WT02 112 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 IGHV3-73A0A0B4J1V6 119 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 K7EP13 123 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 TNFRSF6BO95407 300 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 DNAH10OSP0CZ25 163 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 Q0VG73 95 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 OR10J3Q5JRS4 329 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 DNAJC30Q96LL9 226 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 PRO0255Q9UI72 69 aa10.65□□□□□ -0.7
TSSC4-208ENST00000467308 TRGV4A0A0C4DH28 118 aa10.64□□□□□ -0.71
TSSC4-208ENST00000467308 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
TSSC4-208ENST00000467308 K7EQD1 137 aa10.64□□□□□ -0.71
TSSC4-208ENST00000467308 GAS8-AS1O95177 125 aa10.64□□□□□ -0.71
TSSC4-208ENST00000467308 NCR2O95944 276 aa10.64□□□□□ -0.71
TSSC4-208ENST00000467308 NPYP01303 97 aa10.64□□□□□ -0.71
TSSC4-208ENST00000467308 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
TSSC4-208ENST00000467308 GCSHP23434 173 aa10.63□□□□□ -0.71
TSSC4-208ENST00000467308 MRPL23Q16540 153 aaKnown RBP10.63□□□□□ -0.71
TSSC4-208ENST00000467308 SLC25A29Q8N8R3 303 aa10.63□□□□□ -0.71
TSSC4-208ENST00000467308 C18orf32Q8TCD1 76 aa10.63□□□□□ -0.71
TSSC4-208ENST00000467308 HHLA3Q9XRX5 114 aa10.63□□□□□ -0.71
TSSC4-208ENST00000467308 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
TSSC4-208ENST00000467308 SMR3BP02814 79 aaPredicted RBP10.62□□□□□ -0.71
TSSC4-208ENST00000467308 CRYBA4P53673 196 aa10.62□□□□□ -0.71
TSSC4-208ENST00000467308 RHOHQ15669 191 aa10.62□□□□□ -0.71
TSSC4-208ENST00000467308 COA6Q5JTJ3 125 aaKnown RBP10.62□□□□□ -0.71
TSSC4-208ENST00000467308 NEGR1Q7Z3B1 354 aa10.62□□□□□ -0.71
TSSC4-208ENST00000467308 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
TSSC4-208ENST00000467308 RPL39LQ96EH5 51 aaKnown RBP10.61□□□□□ -0.71
TSSC4-208ENST00000467308 PRADC1Q9BSG0 188 aa10.61□□□□□ -0.71
TSSC4-208ENST00000467308 MAP1LC3AQ9H492 121 aa10.61□□□□□ -0.71
TSSC4-208ENST00000467308 ST20Q9HBF5 79 aa10.61□□□□□ -0.71
TSSC4-208ENST00000467308 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
TSSC4-208ENST00000467308 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
TSSC4-208ENST00000467308 NEXN-AS1Q8NBZ9 246 aa10.6□□□□□ -0.71
TSSC4-208ENST00000467308 NXT2Q9NPJ8 142 aaKnown RBP10.6□□□□□ -0.71
TSSC4-208ENST00000467308 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
TSSC4-208ENST00000467308 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
TSSC4-208ENST00000467308 K7EMI3 77 aa10.59□□□□□ -0.71
TSSC4-208ENST00000467308 LINC00694P0DN24 101 aa10.59□□□□□ -0.71
TSSC4-208ENST00000467308 RPL36AP83881 106 aaKnown RBP10.59□□□□□ -0.71
TSSC4-208ENST00000467308 RPL36ALQ969Q0 106 aaKnown RBP10.59□□□□□ -0.71
TSSC4-208ENST00000467308 TMEM70Q9BUB7 260 aa10.59□□□□□ -0.71
TSSC4-208ENST00000467308 SMIM2Q9BVW6 85 aa10.59□□□□□ -0.71
TSSC4-208ENST00000467308 SDHAF1A6NFY7 115 aa10.58□□□□□ -0.72
TSSC4-208ENST00000467308 VCYO14598 125 aa10.58□□□□□ -0.72
TSSC4-208ENST00000467308 PMCHP20382 165 aa10.58□□□□□ -0.72
TSSC4-208ENST00000467308 Q8N8P6 123 aa10.58□□□□□ -0.72
TSSC4-208ENST00000467308 TCAPO15273 167 aa10.57□□□□□ -0.72
TSSC4-208ENST00000467308 BAGE3Q86Y29 109 aa10.57□□□□□ -0.72
TSSC4-208ENST00000467308 WFDC10BQ8IUB3 73 aa10.57□□□□□ -0.72
TSSC4-208ENST00000467308 C10orf126Q8N4M7 172 aa10.57□□□□□ -0.72
TSSC4-208ENST00000467308 CHCHD1Q96BP2 118 aaKnown RBP10.57□□□□□ -0.72
TSSC4-208ENST00000467308 Q9UF83 564 aa10.57□□□□□ -0.72
TSSC4-208ENST00000467308 J3QL48 77 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 ESDP10768 282 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 UBE2D3P61077 147 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 UBE2D2P62837 147 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 IQCJQ1A5X6 159 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 DAZ4Q86SG3 579 aaKnown RBP10.56□□□□□ -0.72
TSSC4-208ENST00000467308 NIT1Q86X76 327 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 PRSS3P2Q8NHM4 247 aa10.56□□□□□ -0.72
TSSC4-208ENST00000467308 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
TSSC4-208ENST00000467308 DAZ3Q9NR90 486 aaKnown RBP10.56□□□□□ -0.72
TSSC4-208ENST00000467308 IGLV5-52A0A0A0MRZ9 124 aa10.55□□□□□ -0.72
TSSC4-208ENST00000467308 I3L3M4 83 aa10.55□□□□□ -0.72
TSSC4-208ENST00000467308 LINC00614P0C842 121 aa10.55□□□□□ -0.72
TSSC4-208ENST00000467308 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
TSSC4-208ENST00000467308 LINC00310P59036 64 aa10.55□□□□□ -0.72
TSSC4-208ENST00000467308 URB1-AS1Q96HZ7 61 aa10.55□□□□□ -0.72
TSSC4-208ENST00000467308 LOC389332A0A1B0GUA5 103 aa10.54□□□□□ -0.72
TSSC4-208ENST00000467308 GYPEP15421 78 aa10.54□□□□□ -0.72
TSSC4-208ENST00000467308 NDUFA6P56556 154 aa10.54□□□□□ -0.72
TSSC4-208ENST00000467308 HAMPP81172 84 aa10.54□□□□□ -0.72
TSSC4-208ENST00000467308 FA2HQ7L5A8 372 aa10.54□□□□□ -0.72
TSSC4-208ENST00000467308 KIR2DL4Q99706 377 aa10.54□□□□□ -0.72
TSSC4-208ENST00000467308 AP5S1Q9NUS5 200 aa10.54□□□□□ -0.72
TSSC4-208ENST00000467308 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
TSSC4-208ENST00000467308 LRCOL1A6NCL2 159 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 314.5 ms