RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 SPAG11BQ08648 103 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 SPAG11AQ6PDA7 123 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 SPINK6Q6UWN8 80 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 COMMD6Q7Z4G1 85 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 KRTAP2-4Q9BYR9 128 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 KRTAP2-1Q9BYU5 128 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 LENEPQ9Y5L5 61 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 IER3IP1Q9Y5U9 82 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 KCPQ6ZWJ8 1503 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 SIPA1L3O60292 1781 aaPredicted RBP0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 LAMC3Q9Y6N6 1575 aa0.57□□□□□ -2.32
PRPF40A-205ENST00000467114 GOLGA3Q08378 1498 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 PXDNQ92626 1479 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 G3V318 75 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 M0R135 149 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 PPP3R1P63098 170 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 MRPS10P82664 201 aaKnown RBP0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 COX6A2Q02221 97 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 CFAP126Q5VTH2 177 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 PATJQ8NI35 1801 aa0.56□□□□□ -2.32
PRPF40A-205ENST00000467114 DOCK1Q14185 1865 aa0.55□□□□□ -2.32
PRPF40A-205ENST00000467114 UBE2DNLQ8IWF7 75 aa0.55□□□□□ -2.32
PRPF40A-205ENST00000467114 TSLPQ969D9 159 aa0.55□□□□□ -2.32
PRPF40A-205ENST00000467114 V9GYH0 126 aa0.55□□□□□ -2.32
PRPF40A-205ENST00000467114 MYH8P13535 1937 aa0.55□□□□□ -2.32
PRPF40A-205ENST00000467114 WDR7Q9Y4E6 1490 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 TRBV7-3A0A075B6L6 115 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 CTXND1A0A1B0GTU2 59 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 FAM24AA6NFZ4 105 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 PI4KAP42356 2102 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 SVBPQ8N300 66 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 MGST2Q99735 147 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 NPVFQ9HCQ7 196 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 LINC00474Q9P2X8 69 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 BDP1A6H8Y1 2624 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 TNCP24821 2201 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 CACNA1EQ15878 2313 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 NCOA3Q9Y6Q9 1424 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 MRC1P22897 1456 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 MYOM2P54296 1465 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 FRAS1Q86XX4 4008 aa0.54□□□□□ -2.32
PRPF40A-205ENST00000467114 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 QRICH2Q9H0J4 1663 aa0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 IFT172Q9UG01 1749 aa0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 UBE2L5PA0A1B0GUS4 154 aa0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 PIN1P1O15428 100 aa0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 UBE2L3P68036 154 aaKnown RBP0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 MYOZ3Q8TDC0 251 aa0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 DPH3P1Q9H4G8 78 aa0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 NDUFA4L2Q9NRX3 87 aa0.53□□□□□ -2.32
PRPF40A-205ENST00000467114 PRDM2Q13029 1718 aa0.52□□□□□ -2.33
PRPF40A-205ENST00000467114 CACNA1HO95180 2353 aa0.52□□□□□ -2.33
PRPF40A-205ENST00000467114 ZNF815PA8K554 130 aa0.52□□□□□ -2.33
PRPF40A-205ENST00000467114 SSBP3-AS1Q7Z2R9 100 aa0.52□□□□□ -2.33
PRPF40A-205ENST00000467114 SMIM4Q8WVI0 70 aa0.52□□□□□ -2.33
PRPF40A-205ENST00000467114 DYNLRB1Q9NP97 96 aa0.52□□□□□ -2.33
PRPF40A-205ENST00000467114 DOCK2Q92608 1830 aa0.52□□□□□ -2.33
PRPF40A-205ENST00000467114 UNC13BO14795 1591 aa0.51□□□□□ -2.33
PRPF40A-205ENST00000467114 EIF4G3O43432 1585 aaKnown RBP0.51□□□□□ -2.33
PRPF40A-205ENST00000467114 WHAMMP3Q1A5X7 153 aa0.51□□□□□ -2.33
PRPF40A-205ENST00000467114 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
PRPF40A-205ENST00000467114 CUL7Q14999 1698 aa0.5□□□□□ -2.33
PRPF40A-205ENST00000467114 ROBO1Q9Y6N7 1651 aa0.5□□□□□ -2.33
PRPF40A-205ENST00000467114 F8VRH5 84 aa0.5□□□□□ -2.33
PRPF40A-205ENST00000467114 IFITM1P13164 125 aa0.5□□□□□ -2.33
PRPF40A-205ENST00000467114 TTC28Q96AY4 2481 aa0.5□□□□□ -2.33
PRPF40A-205ENST00000467114 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
PRPF40A-205ENST00000467114 LOC285095A0A1B0GVY8 99 aa0.49□□□□□ -2.33
PRPF40A-205ENST00000467114 C20orf202A1L168 122 aa0.49□□□□□ -2.33
PRPF40A-205ENST00000467114 HMGN4O00479 90 aa0.49□□□□□ -2.33
PRPF40A-205ENST00000467114 ATP5EP56381 51 aaPredicted RBP0.49□□□□□ -2.33
PRPF40A-205ENST00000467114 DCDP81605 110 aaKnown RBP0.49□□□□□ -2.33
PRPF40A-205ENST00000467114 BAGE2Q86Y30 109 aa0.49□□□□□ -2.33
PRPF40A-205ENST00000467114 AMELXQ99217 191 aa0.49□□□□□ -2.33
PRPF40A-205ENST00000467114 ZNF609O15014 1411 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 IGLC7A0M8Q6 106 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 CHKB-CPT1BH3BT56 60 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 UQCR11O14957 56 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 S100PP25815 95 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 GNG11P61952 73 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 TMEM170BQ5T4T1 132 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 GTF2H5Q6ZYL4 71 aa0.48□□□□□ -2.33
PRPF40A-205ENST00000467114 C10orf71Q711Q0 1435 aa0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 A0A0D9SFI3 127 aa0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 SPINK8P0C7L1 97 aa0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 HAMPP81172 84 aa0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 COX17Q14061 63 aa0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 LINC01558Q9Y6Z2 57 aa0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 TPRP12270 2363 aaKnown RBP0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 PZPP20742 1482 aa0.47□□□□□ -2.33
PRPF40A-205ENST00000467114 ABCA12Q86UK0 2595 aa0.46□□□□□ -2.34
PRPF40A-205ENST00000467114 APOC3P02656 99 aa0.46□□□□□ -2.34
PRPF40A-205ENST00000467114 FAM135AQ9P2D6 1515 aa0.46□□□□□ -2.34
PRPF40A-205ENST00000467114 ASXL3Q9C0F0 2248 aa0.46□□□□□ -2.34
PRPF40A-205ENST00000467114 PSME4Q14997 1843 aa0.45□□□□□ -2.34
PRPF40A-205ENST00000467114 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
PRPF40A-205ENST00000467114 UQCR10Q9UDW1 63 aa0.45□□□□□ -2.34
PRPF40A-205ENST00000467114 SCAPERQ9BY12 1400 aa0.45□□□□□ -2.34
PRPF40A-205ENST00000467114 ZNF236Q9UL36 1845 aa0.45□□□□□ -2.34
PRPF40A-205ENST00000467114 MAPKBP1O60336 1514 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms