RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 IGHV1-69DA0A0B4J2H0 117 aa2.54□□□□□ -2
SORT1-202ENST00000466471 IGHV1-18A0A0C4DH31 117 aa2.54□□□□□ -2
SORT1-202ENST00000466471 TRBV7-7A0A0K0K1E9 115 aa2.54□□□□□ -2
SORT1-202ENST00000466471 TMEM213A2RRL7 107 aa2.54□□□□□ -2
SORT1-202ENST00000466471 A8MWV9 139 aa2.54□□□□□ -2
SORT1-202ENST00000466471 K7EIM0 57 aa2.54□□□□□ -2
SORT1-202ENST00000466471 SH2D1AO60880 128 aa2.54□□□□□ -2
SORT1-202ENST00000466471 PPP1R17O96001 155 aa2.54□□□□□ -2
SORT1-202ENST00000466471 IL4P05112 153 aa2.54□□□□□ -2
SORT1-202ENST00000466471 ATP5G1P05496 136 aa2.54□□□□□ -2
SORT1-202ENST00000466471 LGALS1P09382 135 aaKnown RBP2.54□□□□□ -2
SORT1-202ENST00000466471 ORM2P19652 201 aa2.54□□□□□ -2
SORT1-202ENST00000466471 PRTN3P24158 256 aa2.54□□□□□ -2
SORT1-202ENST00000466471 HLA-DMBP28068 263 aa2.54□□□□□ -2
SORT1-202ENST00000466471 ID1P41134 155 aa2.54□□□□□ -2
SORT1-202ENST00000466471 LEPP41159 167 aa2.54□□□□□ -2
SORT1-202ENST00000466471 NMUP48645 174 aa2.54□□□□□ -2
SORT1-202ENST00000466471 NDUFV3P56181 108 aaKnown RBP2.54□□□□□ -2
SORT1-202ENST00000466471 GOLT1AQ6ZVE7 132 aa2.54□□□□□ -2
SORT1-202ENST00000466471 PRNTQ86SH4 94 aa2.54□□□□□ -2
SORT1-202ENST00000466471 NDUFA11Q86Y39 141 aa2.54□□□□□ -2
SORT1-202ENST00000466471 APRG1Q8IVJ8 170 aa2.54□□□□□ -2
SORT1-202ENST00000466471 C10orf126Q8N4M7 172 aa2.54□□□□□ -2
SORT1-202ENST00000466471 SLC25A29Q8N8R3 303 aa2.54□□□□□ -2
SORT1-202ENST00000466471 ZNRF1Q8ND25 227 aa2.54□□□□□ -2
SORT1-202ENST00000466471 NUP37Q8NFH4 326 aa2.54□□□□□ -2
SORT1-202ENST00000466471 TOMM6Q96B49 74 aa2.54□□□□□ -2
SORT1-202ENST00000466471 MRPL20Q9BYC9 149 aaKnown RBP2.54□□□□□ -2
SORT1-202ENST00000466471 SPRR3Q9UBC9 169 aa2.54□□□□□ -2
SORT1-202ENST00000466471 SIGLEC9Q9Y336 463 aa2.54□□□□□ -2
SORT1-202ENST00000466471 MED12LQ86YW9 2145 aa2.54□□□□□ -2
SORT1-202ENST00000466471 TRAV8-1A0A0A6YYK1 113 aa2.53□□□□□ -2
SORT1-202ENST00000466471 A0A0J9YY99 117 aa2.53□□□□□ -2
SORT1-202ENST00000466471 TRBV30A0A0K0K1B3 111 aa2.53□□□□□ -2
SORT1-202ENST00000466471 A0A1B0GX51 115 aa2.53□□□□□ -2
SORT1-202ENST00000466471 DNAJC9-AS1A6NH13 148 aa2.53□□□□□ -2
SORT1-202ENST00000466471 NCBP2LA6PVI3 153 aaKnown RBP2.53□□□□□ -2
SORT1-202ENST00000466471 FABP5P3A8MUU1 101 aa2.53□□□□□ -2
SORT1-202ENST00000466471 LY6LH3BQJ8 138 aa2.53□□□□□ -2
SORT1-202ENST00000466471 K7ERJ3 54 aa2.53□□□□□ -2
SORT1-202ENST00000466471 IGLV1-47P01700 117 aa2.53□□□□□ -2
SORT1-202ENST00000466471 IGHV3-30P01768 117 aa2.53□□□□□ -2
SORT1-202ENST00000466471 IGHV3-30-5P0DP03 117 aa2.53□□□□□ -2
SORT1-202ENST00000466471 RPL7P18124 248 aaKnown RBP2.53□□□□□ -2
SORT1-202ENST00000466471 RPL27AP46776 148 aaKnown RBP2.53□□□□□ -2
SORT1-202ENST00000466471 ERCC8Q13216 396 aa2.53□□□□□ -2
SORT1-202ENST00000466471 EDDM3AQ14507 147 aa2.53□□□□□ -2
SORT1-202ENST00000466471 TMEM155Q4W5P6 130 aa2.53□□□□□ -2
SORT1-202ENST00000466471 ORMDL2Q53FV1 153 aa2.53□□□□□ -2
SORT1-202ENST00000466471 AMTNQ6UX39 209 aa2.53□□□□□ -2
SORT1-202ENST00000466471 GTSCR1Q86UQ5 136 aa2.53□□□□□ -2
SORT1-202ENST00000466471 EXOC3-AS1Q8N2X6 119 aa2.53□□□□□ -2
SORT1-202ENST00000466471 NPBQ8NG41 125 aa2.53□□□□□ -2
SORT1-202ENST00000466471 OR10J6PQ8NGY7 276 aa2.53□□□□□ -2
SORT1-202ENST00000466471 MUC7Q8TAX7 377 aa2.53□□□□□ -2
SORT1-202ENST00000466471 RASL10AQ92737 203 aa2.53□□□□□ -2
SORT1-202ENST00000466471 TIMD4Q96H15 378 aa2.53□□□□□ -2
SORT1-202ENST00000466471 AMELXQ99217 191 aa2.53□□□□□ -2
SORT1-202ENST00000466471 NAA38Q9BRA0 125 aaKnown RBP2.53□□□□□ -2
SORT1-202ENST00000466471 SLC50A1Q9BRV3 221 aa2.53□□□□□ -2
SORT1-202ENST00000466471 RAB1BQ9H0U4 201 aa2.53□□□□□ -2
SORT1-202ENST00000466471 MRPL35Q9NZE8 188 aaKnown RBP2.53□□□□□ -2
SORT1-202ENST00000466471 IGKV3D-20A0A0C4DH25 116 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 IGHV7-4-1A0A0J9YVY3 117 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 TRBV10-2A0A0K0K1G8 114 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 IGIPA6NJ69 53 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 C11orf86A6NJI1 115 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 H3BT86 120 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 M0R2P5 195 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 BUB3O43684 328 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 NDUFA3O95167 84 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 IGHV1-46P01743 117 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 ACYP1P07311 99 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 CFC1BP0CG36 223 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 CFC1P0CG37 223 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 SCGB1C2P0DMR2 95 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 IFITM1P13164 125 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 EBI3Q14213 229 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 TMEM78Q5T7P6 136 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 LINC01561Q8N1V8 128 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 TMEM141Q96I45 108 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 ODF3Q96PU9 254 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 HIST1H4GQ99525 98 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 TIMM17AQ99595 171 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 RASL11BQ9BPW5 248 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 ANAPC13Q9BS18 74 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 HINT2Q9BX68 163 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 OCR1Q9BZK8 76 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 HSPG2P98160 4391 aa2.52□□□□□ -2.01
SORT1-202ENST00000466471 DOCK11Q5JSL3 2073 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 IGLV11-55A0A075B6I3 123 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 IGHV3OR15-7A0A075B7D8 119 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 IGHV1-3A0A0C4DH29 117 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 TRBV6-5A0A0K0K1A5 114 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 LOC389332A0A1B0GUA5 103 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 SDHAF1A6NFY7 115 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 K7EQG2 157 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 LGALS9O00182 355 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 SLC25A20O43772 301 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms